data_5Z7L
#
_model_server_result.job_id            LPtCJ02q_D52kLIl5suf1A 
_model_server_result.datetime_utc      '2024-11-22 20:33:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5z7l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":201}' 
#
_entry.id    5Z7L 
#
_exptl.entry_id    5Z7L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          123.77 
_cell.angle_gamma         90 
_cell.entry_id            5Z7L 
_cell.length_a            113.639 
_cell.length_b            45.026 
_cell.length_c            86.679 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5Z7L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     5Z7L 
_atom_sites.fract_transf_matrix[1][1]    0.0088 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005885 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022209 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013879 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 GOL A 1 201 1 GOL GOL . 
F 3 GOL B 1 201 2 GOL GOL . 
G 3 GOL B 1 202 3 GOL GOL . 
H 3 GOL B 1 203 4 GOL GOL . 
I 4 HOH A 1 301 30 HOH HOH . 
I 4 HOH A 2 302 45 HOH HOH . 
I 4 HOH A 3 303 6 HOH HOH . 
I 4 HOH A 4 304 71 HOH HOH . 
I 4 HOH A 5 305 32 HOH HOH . 
I 4 HOH A 6 306 129 HOH HOH . 
I 4 HOH A 7 307 31 HOH HOH . 
I 4 HOH A 8 308 253 HOH HOH . 
I 4 HOH A 9 309 10 HOH HOH . 
I 4 HOH A 10 310 36 HOH HOH . 
I 4 HOH A 11 311 99 HOH HOH . 
I 4 HOH A 12 312 77 HOH HOH . 
I 4 HOH A 13 313 191 HOH HOH . 
I 4 HOH A 14 314 23 HOH HOH . 
I 4 HOH A 15 315 35 HOH HOH . 
I 4 HOH A 16 316 115 HOH HOH . 
I 4 HOH A 17 317 231 HOH HOH . 
I 4 HOH A 18 318 74 HOH HOH . 
I 4 HOH A 19 319 21 HOH HOH . 
I 4 HOH A 20 320 56 HOH HOH . 
I 4 HOH A 21 321 38 HOH HOH . 
I 4 HOH A 22 322 227 HOH HOH . 
I 4 HOH A 23 323 258 HOH HOH . 
I 4 HOH A 24 324 136 HOH HOH . 
I 4 HOH A 25 325 160 HOH HOH . 
I 4 HOH A 26 326 48 HOH HOH . 
I 4 HOH A 27 327 60 HOH HOH . 
I 4 HOH A 28 328 188 HOH HOH . 
I 4 HOH A 29 329 65 HOH HOH . 
I 4 HOH A 30 330 61 HOH HOH . 
I 4 HOH A 31 331 173 HOH HOH . 
I 4 HOH A 32 332 29 HOH HOH . 
I 4 HOH A 33 333 125 HOH HOH . 
I 4 HOH A 34 334 233 HOH HOH . 
I 4 HOH A 35 335 118 HOH HOH . 
I 4 HOH A 36 336 110 HOH HOH . 
I 4 HOH A 37 337 54 HOH HOH . 
I 4 HOH A 38 338 57 HOH HOH . 
I 4 HOH A 39 339 126 HOH HOH . 
I 4 HOH A 40 340 119 HOH HOH . 
I 4 HOH A 41 341 108 HOH HOH . 
I 4 HOH A 42 342 107 HOH HOH . 
I 4 HOH A 43 343 252 HOH HOH . 
I 4 HOH A 44 344 82 HOH HOH . 
I 4 HOH A 45 345 12 HOH HOH . 
I 4 HOH A 46 346 72 HOH HOH . 
I 4 HOH A 47 347 128 HOH HOH . 
I 4 HOH A 48 348 178 HOH HOH . 
I 4 HOH A 49 349 150 HOH HOH . 
I 4 HOH A 50 350 185 HOH HOH . 
I 4 HOH A 51 351 170 HOH HOH . 
I 4 HOH A 52 352 271 HOH HOH . 
I 4 HOH A 53 353 209 HOH HOH . 
I 4 HOH A 54 354 261 HOH HOH . 
I 4 HOH A 55 355 120 HOH HOH . 
I 4 HOH A 56 356 83 HOH HOH . 
I 4 HOH A 57 357 39 HOH HOH . 
I 4 HOH A 58 358 141 HOH HOH . 
I 4 HOH A 59 359 50 HOH HOH . 
I 4 HOH A 60 360 152 HOH HOH . 
I 4 HOH A 61 361 113 HOH HOH . 
I 4 HOH A 62 362 180 HOH HOH . 
I 4 HOH A 63 363 91 HOH HOH . 
I 4 HOH A 64 364 106 HOH HOH . 
I 4 HOH A 65 365 81 HOH HOH . 
I 4 HOH A 66 366 130 HOH HOH . 
I 4 HOH A 67 367 235 HOH HOH . 
I 4 HOH A 68 368 163 HOH HOH . 
I 4 HOH A 69 369 84 HOH HOH . 
I 4 HOH A 70 370 211 HOH HOH . 
I 4 HOH A 71 371 167 HOH HOH . 
I 4 HOH A 72 372 53 HOH HOH . 
I 4 HOH A 73 373 217 HOH HOH . 
I 4 HOH A 74 374 236 HOH HOH . 
I 4 HOH A 75 375 121 HOH HOH . 
I 4 HOH A 76 376 199 HOH HOH . 
I 4 HOH A 77 377 223 HOH HOH . 
I 4 HOH A 78 378 240 HOH HOH . 
I 4 HOH A 79 379 122 HOH HOH . 
I 4 HOH A 80 380 270 HOH HOH . 
I 4 HOH A 81 381 215 HOH HOH . 
I 4 HOH A 82 382 133 HOH HOH . 
I 4 HOH A 83 383 218 HOH HOH . 
I 4 HOH A 84 384 247 HOH HOH . 
I 4 HOH A 85 385 226 HOH HOH . 
I 4 HOH A 86 386 179 HOH HOH . 
J 4 HOH B 1 301 203 HOH HOH . 
J 4 HOH B 2 302 59 HOH HOH . 
J 4 HOH B 3 303 17 HOH HOH . 
J 4 HOH B 4 304 62 HOH HOH . 
J 4 HOH B 5 305 22 HOH HOH . 
J 4 HOH B 6 306 66 HOH HOH . 
J 4 HOH B 7 307 112 HOH HOH . 
J 4 HOH B 8 308 44 HOH HOH . 
J 4 HOH B 9 309 4 HOH HOH . 
J 4 HOH B 10 310 18 HOH HOH . 
J 4 HOH B 11 311 260 HOH HOH . 
J 4 HOH B 12 312 16 HOH HOH . 
J 4 HOH B 13 313 229 HOH HOH . 
J 4 HOH B 14 314 168 HOH HOH . 
J 4 HOH B 15 315 41 HOH HOH . 
J 4 HOH B 16 316 8 HOH HOH . 
J 4 HOH B 17 317 159 HOH HOH . 
J 4 HOH B 18 318 196 HOH HOH . 
J 4 HOH B 19 319 11 HOH HOH . 
J 4 HOH B 20 320 15 HOH HOH . 
J 4 HOH B 21 321 20 HOH HOH . 
J 4 HOH B 22 322 28 HOH HOH . 
J 4 HOH B 23 323 95 HOH HOH . 
J 4 HOH B 24 324 64 HOH HOH . 
J 4 HOH B 25 325 166 HOH HOH . 
J 4 HOH B 26 326 134 HOH HOH . 
J 4 HOH B 27 327 263 HOH HOH . 
J 4 HOH B 28 328 52 HOH HOH . 
J 4 HOH B 29 329 3 HOH HOH . 
J 4 HOH B 30 330 148 HOH HOH . 
J 4 HOH B 31 331 51 HOH HOH . 
J 4 HOH B 32 332 33 HOH HOH . 
J 4 HOH B 33 333 2 HOH HOH . 
J 4 HOH B 34 334 25 HOH HOH . 
J 4 HOH B 35 335 116 HOH HOH . 
J 4 HOH B 36 336 86 HOH HOH . 
J 4 HOH B 37 337 109 HOH HOH . 
J 4 HOH B 38 338 13 HOH HOH . 
J 4 HOH B 39 339 19 HOH HOH . 
J 4 HOH B 40 340 76 HOH HOH . 
J 4 HOH B 41 341 186 HOH HOH . 
J 4 HOH B 42 342 137 HOH HOH . 
J 4 HOH B 43 343 7 HOH HOH . 
J 4 HOH B 44 344 154 HOH HOH . 
J 4 HOH B 45 345 9 HOH HOH . 
J 4 HOH B 46 346 67 HOH HOH . 
J 4 HOH B 47 347 262 HOH HOH . 
J 4 HOH B 48 348 79 HOH HOH . 
J 4 HOH B 49 349 63 HOH HOH . 
J 4 HOH B 50 350 206 HOH HOH . 
J 4 HOH B 51 351 69 HOH HOH . 
J 4 HOH B 52 352 244 HOH HOH . 
J 4 HOH B 53 353 146 HOH HOH . 
J 4 HOH B 54 354 242 HOH HOH . 
J 4 HOH B 55 355 153 HOH HOH . 
J 4 HOH B 56 356 151 HOH HOH . 
J 4 HOH B 57 357 251 HOH HOH . 
J 4 HOH B 58 358 201 HOH HOH . 
J 4 HOH B 59 359 5 HOH HOH . 
J 4 HOH B 60 360 70 HOH HOH . 
J 4 HOH B 61 361 1 HOH HOH . 
J 4 HOH B 62 362 266 HOH HOH . 
J 4 HOH B 63 363 47 HOH HOH . 
J 4 HOH B 64 364 197 HOH HOH . 
J 4 HOH B 65 365 205 HOH HOH . 
J 4 HOH B 66 366 93 HOH HOH . 
J 4 HOH B 67 367 94 HOH HOH . 
J 4 HOH B 68 368 256 HOH HOH . 
J 4 HOH B 69 369 100 HOH HOH . 
J 4 HOH B 70 370 123 HOH HOH . 
J 4 HOH B 71 371 40 HOH HOH . 
J 4 HOH B 72 372 101 HOH HOH . 
J 4 HOH B 73 373 105 HOH HOH . 
J 4 HOH B 74 374 250 HOH HOH . 
J 4 HOH B 75 375 222 HOH HOH . 
J 4 HOH B 76 376 241 HOH HOH . 
J 4 HOH B 77 377 237 HOH HOH . 
J 4 HOH B 78 378 147 HOH HOH . 
J 4 HOH B 79 379 243 HOH HOH . 
J 4 HOH B 80 380 68 HOH HOH . 
J 4 HOH B 81 381 97 HOH HOH . 
J 4 HOH B 82 382 220 HOH HOH . 
J 4 HOH B 83 383 85 HOH HOH . 
J 4 HOH B 84 384 257 HOH HOH . 
J 4 HOH B 85 385 198 HOH HOH . 
J 4 HOH B 86 386 88 HOH HOH . 
J 4 HOH B 87 387 190 HOH HOH . 
J 4 HOH B 88 388 224 HOH HOH . 
J 4 HOH B 89 389 90 HOH HOH . 
J 4 HOH B 90 390 267 HOH HOH . 
J 4 HOH B 91 391 187 HOH HOH . 
J 4 HOH B 92 392 268 HOH HOH . 
J 4 HOH B 93 393 200 HOH HOH . 
J 4 HOH B 94 394 204 HOH HOH . 
J 4 HOH B 95 395 269 HOH HOH . 
J 4 HOH B 96 396 175 HOH HOH . 
J 4 HOH B 97 397 264 HOH HOH . 
J 4 HOH B 98 398 139 HOH HOH . 
J 4 HOH B 99 399 162 HOH HOH . 
J 4 HOH B 100 400 230 HOH HOH . 
J 4 HOH B 101 401 24 HOH HOH . 
J 4 HOH B 102 402 155 HOH HOH . 
J 4 HOH B 103 403 248 HOH HOH . 
J 4 HOH B 104 404 169 HOH HOH . 
J 4 HOH B 105 405 143 HOH HOH . 
J 4 HOH B 106 406 214 HOH HOH . 
J 4 HOH B 107 407 192 HOH HOH . 
J 4 HOH B 108 408 195 HOH HOH . 
J 4 HOH B 109 409 202 HOH HOH . 
J 4 HOH B 110 410 246 HOH HOH . 
J 4 HOH B 111 411 158 HOH HOH . 
K 4 HOH C 1 101 42 HOH HOH . 
K 4 HOH C 2 102 49 HOH HOH . 
K 4 HOH C 3 103 132 HOH HOH . 
K 4 HOH C 4 104 255 HOH HOH . 
K 4 HOH C 5 105 245 HOH HOH . 
K 4 HOH C 6 106 98 HOH HOH . 
K 4 HOH C 7 107 127 HOH HOH . 
K 4 HOH C 8 108 58 HOH HOH . 
K 4 HOH C 9 109 210 HOH HOH . 
K 4 HOH C 10 110 176 HOH HOH . 
K 4 HOH C 11 111 161 HOH HOH . 
K 4 HOH C 12 112 124 HOH HOH . 
K 4 HOH C 13 113 117 HOH HOH . 
K 4 HOH C 14 114 183 HOH HOH . 
K 4 HOH C 15 115 46 HOH HOH . 
K 4 HOH C 16 116 238 HOH HOH . 
K 4 HOH C 17 117 80 HOH HOH . 
K 4 HOH C 18 118 172 HOH HOH . 
K 4 HOH C 19 119 259 HOH HOH . 
K 4 HOH C 20 120 194 HOH HOH . 
K 4 HOH C 21 121 87 HOH HOH . 
K 4 HOH C 22 122 102 HOH HOH . 
K 4 HOH C 23 123 221 HOH HOH . 
K 4 HOH C 24 124 149 HOH HOH . 
K 4 HOH C 25 125 156 HOH HOH . 
K 4 HOH C 26 126 254 HOH HOH . 
K 4 HOH C 27 127 174 HOH HOH . 
K 4 HOH C 28 128 138 HOH HOH . 
K 4 HOH C 29 129 182 HOH HOH . 
K 4 HOH C 30 130 207 HOH HOH . 
K 4 HOH C 31 131 216 HOH HOH . 
K 4 HOH C 32 132 234 HOH HOH . 
K 4 HOH C 33 133 165 HOH HOH . 
K 4 HOH C 34 134 111 HOH HOH . 
K 4 HOH C 35 135 239 HOH HOH . 
K 4 HOH C 36 136 265 HOH HOH . 
L 4 HOH D 1 101 219 HOH HOH . 
L 4 HOH D 2 102 89 HOH HOH . 
L 4 HOH D 3 103 73 HOH HOH . 
L 4 HOH D 4 104 27 HOH HOH . 
L 4 HOH D 5 105 92 HOH HOH . 
L 4 HOH D 6 106 14 HOH HOH . 
L 4 HOH D 7 107 144 HOH HOH . 
L 4 HOH D 8 108 140 HOH HOH . 
L 4 HOH D 9 109 177 HOH HOH . 
L 4 HOH D 10 110 75 HOH HOH . 
L 4 HOH D 11 111 131 HOH HOH . 
L 4 HOH D 12 112 96 HOH HOH . 
L 4 HOH D 13 113 114 HOH HOH . 
L 4 HOH D 14 114 34 HOH HOH . 
L 4 HOH D 15 115 37 HOH HOH . 
L 4 HOH D 16 116 164 HOH HOH . 
L 4 HOH D 17 117 103 HOH HOH . 
L 4 HOH D 18 118 232 HOH HOH . 
L 4 HOH D 19 119 26 HOH HOH . 
L 4 HOH D 20 120 43 HOH HOH . 
L 4 HOH D 21 121 157 HOH HOH . 
L 4 HOH D 22 122 225 HOH HOH . 
L 4 HOH D 23 123 142 HOH HOH . 
L 4 HOH D 24 124 171 HOH HOH . 
L 4 HOH D 25 125 104 HOH HOH . 
L 4 HOH D 26 126 135 HOH HOH . 
L 4 HOH D 27 127 78 HOH HOH . 
L 4 HOH D 28 128 184 HOH HOH . 
L 4 HOH D 29 129 212 HOH HOH . 
L 4 HOH D 30 130 55 HOH HOH . 
L 4 HOH D 31 131 272 HOH HOH . 
L 4 HOH D 32 132 193 HOH HOH . 
L 4 HOH D 33 133 189 HOH HOH . 
L 4 HOH D 34 134 228 HOH HOH . 
L 4 HOH D 35 135 145 HOH HOH . 
L 4 HOH D 36 136 213 HOH HOH . 
L 4 HOH D 37 137 249 HOH HOH . 
L 4 HOH D 38 138 208 HOH HOH . 
L 4 HOH D 39 139 181 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 3 210.952 -22.969 99.227 1 60.14 ? C1 GOL 201 A 1 
HETATM 2 O O1 GOL . . . E 3 210.11 -22.604 100.275 1 55.75 ? O1 GOL 201 A 1 
HETATM 3 C C2 GOL . . . E 3 212.177 -22.002 99.183 1 62.55 ? C2 GOL 201 A 1 
HETATM 4 O O2 GOL . . . E 3 211.908 -20.746 99.721 1 66.07 ? O2 GOL 201 A 1 
HETATM 5 C C3 GOL . . . E 3 213.324 -22.753 99.928 1 61.1 ? C3 GOL 201 A 1 
HETATM 6 O O3 GOL . . . E 3 213.93 -23.595 98.998 1 53.8 ? O3 GOL 201 A 1 
#
_model_server_stats.io_time_ms              54 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#