data_5Z9M # _model_server_result.job_id sO6_-zhEVAYNfbZmtKIekg _model_server_result.datetime_utc '2024-12-05 10:18:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5z9m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":301}' # _entry.id 5Z9M # _exptl.entry_id 5Z9M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 162.142 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-benzofuran-2-carboxylic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Z9M _cell.length_a 97.38 _cell.length_b 101.79 _cell.length_c 104.86 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Z9M _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,P 1 1 B,L,M,N,O,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 L N N # _chem_comp.formula 'C9 H6 O3' _chem_comp.formula_weight 162.142 _chem_comp.id BZ2 _chem_comp.mon_nstd_flag . _chem_comp.name '1-benzofuran-2-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAI OAA BZ2 sing 70 n n OAA HOAA BZ2 sing 71 n n OAB CAI BZ2 doub 72 n n CAD CAC BZ2 doub 73 n y CAE CAC BZ2 sing 74 n y CAC HAC BZ2 sing 75 n n CAF CAD BZ2 sing 76 n y CAD HAD BZ2 sing 77 n n CAK CAE BZ2 doub 78 n y CAE HAE BZ2 sing 79 n n CAL CAF BZ2 doub 80 n y CAF HAF BZ2 sing 81 n n CAJ CAG BZ2 doub 82 n y CAG CAK BZ2 sing 83 n y CAG HAG BZ2 sing 84 n n CAJ OAH BZ2 sing 85 n y OAH CAL BZ2 sing 86 n y CAI CAJ BZ2 sing 87 n n CAL CAK BZ2 sing 88 n y # _atom_sites.entry_id 5Z9M _atom_sites.fract_transf_matrix[1][1] 0.010269 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009537 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BZ2 A 1 301 2 BZ2 BZ2 . D 3 SO4 A 1 302 1 SO4 SO4 . E 3 SO4 A 1 303 6 SO4 SO4 . F 3 SO4 A 1 304 7 SO4 SO4 . G 3 SO4 A 1 305 8 SO4 SO4 . H 3 SO4 A 1 306 10 SO4 SO4 . I 3 SO4 A 1 307 11 SO4 SO4 . J 3 SO4 A 1 308 12 SO4 SO4 . K 3 SO4 A 1 309 13 SO4 SO4 . L 2 BZ2 B 1 301 1 BZ2 BZ2 . M 3 SO4 B 1 302 4 SO4 SO4 . N 3 SO4 B 1 303 5 SO4 SO4 . O 3 SO4 B 1 304 9 SO4 SO4 . P 4 HOH A 1 401 53 HOH HOH . P 4 HOH A 2 402 48 HOH HOH . P 4 HOH A 3 403 41 HOH HOH . P 4 HOH A 4 404 43 HOH HOH . P 4 HOH A 5 405 16 HOH HOH . P 4 HOH A 6 406 44 HOH HOH . P 4 HOH A 7 407 47 HOH HOH . P 4 HOH A 8 408 46 HOH HOH . P 4 HOH A 9 409 39 HOH HOH . P 4 HOH A 10 410 3 HOH HOH . P 4 HOH A 11 411 9 HOH HOH . P 4 HOH A 12 412 38 HOH HOH . P 4 HOH A 13 413 12 HOH HOH . P 4 HOH A 14 414 8 HOH HOH . P 4 HOH A 15 415 2 HOH HOH . P 4 HOH A 16 416 6 HOH HOH . P 4 HOH A 17 417 7 HOH HOH . P 4 HOH A 18 418 5 HOH HOH . P 4 HOH A 19 419 54 HOH HOH . P 4 HOH A 20 420 19 HOH HOH . P 4 HOH A 21 421 15 HOH HOH . P 4 HOH A 22 422 10 HOH HOH . P 4 HOH A 23 423 18 HOH HOH . P 4 HOH A 24 424 17 HOH HOH . Q 4 HOH B 1 401 52 HOH HOH . Q 4 HOH B 2 402 34 HOH HOH . Q 4 HOH B 3 403 42 HOH HOH . Q 4 HOH B 4 404 37 HOH HOH . Q 4 HOH B 5 405 49 HOH HOH . Q 4 HOH B 6 406 51 HOH HOH . Q 4 HOH B 7 407 40 HOH HOH . Q 4 HOH B 8 408 29 HOH HOH . Q 4 HOH B 9 409 28 HOH HOH . Q 4 HOH B 10 410 26 HOH HOH . Q 4 HOH B 11 411 35 HOH HOH . Q 4 HOH B 12 412 21 HOH HOH . Q 4 HOH B 13 413 30 HOH HOH . Q 4 HOH B 14 414 22 HOH HOH . Q 4 HOH B 15 415 25 HOH HOH . Q 4 HOH B 16 416 4 HOH HOH . Q 4 HOH B 17 417 33 HOH HOH . Q 4 HOH B 18 418 32 HOH HOH . Q 4 HOH B 19 419 31 HOH HOH . Q 4 HOH B 20 420 23 HOH HOH . Q 4 HOH B 21 421 50 HOH HOH . Q 4 HOH B 22 422 20 HOH HOH . Q 4 HOH B 23 423 27 HOH HOH . Q 4 HOH B 24 424 11 HOH HOH . Q 4 HOH B 25 425 45 HOH HOH . Q 4 HOH B 26 426 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAA BZ2 . . . L 2 -4.848 26.935 22.739 1 89.05 ? OAA BZ2 301 B 1 HETATM 2 O OAB BZ2 . . . L 2 -3.181 25.545 22.208 1 92.22 ? OAB BZ2 301 B 1 HETATM 3 C CAC BZ2 . . . L 2 -8.509 21.689 20.69 1 89.26 ? CAC BZ2 301 B 1 HETATM 4 C CAD BZ2 . . . L 2 -7.341 20.957 20.488 1 90.08 ? CAD BZ2 301 B 1 HETATM 5 C CAE BZ2 . . . L 2 -8.449 22.997 21.155 1 87.49 ? CAE BZ2 301 B 1 HETATM 6 C CAF BZ2 . . . L 2 -6.099 21.522 20.748 1 89.45 ? CAF BZ2 301 B 1 HETATM 7 C CAG BZ2 . . . L 2 -6.741 24.873 21.86 1 87.23 ? CAG BZ2 301 B 1 HETATM 8 O OAH BZ2 . . . L 2 -4.939 23.568 21.494 1 85.74 ? OAH BZ2 301 B 1 HETATM 9 C CAI BZ2 . . . L 2 -4.376 25.796 22.301 1 89 ? CAI BZ2 301 B 1 HETATM 10 C CAJ BZ2 . . . L 2 -5.397 24.812 21.893 1 86.75 ? CAJ BZ2 301 B 1 HETATM 11 C CAK BZ2 . . . L 2 -7.208 23.587 21.422 1 87.26 ? CAK BZ2 301 B 1 HETATM 12 C CAL BZ2 . . . L 2 -6.067 22.827 21.207 1 88.29 ? CAL BZ2 301 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #