data_5Z9O # _model_server_result.job_id QJIHgyiyaSwH9bN5pcqKew _model_server_result.datetime_utc '2024-11-19 05:37:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5z9o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 5Z9O # _exptl.entry_id 5Z9O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.009 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CARBONATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5Z9O _cell.length_a 120.982 _cell.length_b 120.982 _cell.length_c 163.487 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Z9O _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C O3 -2' _chem_comp.formula_weight 60.009 _chem_comp.id CO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'CARBONATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 CO3 doub 70 n n C O2 CO3 sing 71 n n C O3 CO3 sing 72 n n # _atom_sites.entry_id 5Z9O _atom_sites.fract_transf_matrix[1][1] 0.008266 _atom_sites.fract_transf_matrix[1][2] 0.004772 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009544 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006117 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO3 A 1 401 900 CO3 CO3 . D 3 EPH A 1 402 601 EPH EPH . E 2 CO3 B 1 401 900 CO3 CO3 . F 3 EPH B 1 402 601 EPH EPH . G 4 HOH A 1 501 144 HOH HOH . G 4 HOH A 2 502 255 HOH HOH . G 4 HOH A 3 503 34 HOH HOH . G 4 HOH A 4 504 285 HOH HOH . G 4 HOH A 5 505 12 HOH HOH . G 4 HOH A 6 506 119 HOH HOH . G 4 HOH A 7 507 69 HOH HOH . G 4 HOH A 8 508 222 HOH HOH . G 4 HOH A 9 509 154 HOH HOH . G 4 HOH A 10 510 13 HOH HOH . G 4 HOH A 11 511 41 HOH HOH . G 4 HOH A 12 512 91 HOH HOH . G 4 HOH A 13 513 135 HOH HOH . G 4 HOH A 14 514 266 HOH HOH . G 4 HOH A 15 515 20 HOH HOH . G 4 HOH A 16 516 229 HOH HOH . G 4 HOH A 17 517 60 HOH HOH . G 4 HOH A 18 518 98 HOH HOH . G 4 HOH A 19 519 247 HOH HOH . G 4 HOH A 20 520 159 HOH HOH . G 4 HOH A 21 521 188 HOH HOH . G 4 HOH A 22 522 1 HOH HOH . G 4 HOH A 23 523 125 HOH HOH . G 4 HOH A 24 524 251 HOH HOH . G 4 HOH A 25 525 230 HOH HOH . G 4 HOH A 26 526 70 HOH HOH . G 4 HOH A 27 527 86 HOH HOH . G 4 HOH A 28 528 143 HOH HOH . G 4 HOH A 29 529 105 HOH HOH . G 4 HOH A 30 530 68 HOH HOH . G 4 HOH A 31 531 31 HOH HOH . G 4 HOH A 32 532 25 HOH HOH . G 4 HOH A 33 533 180 HOH HOH . G 4 HOH A 34 534 156 HOH HOH . G 4 HOH A 35 535 158 HOH HOH . G 4 HOH A 36 536 260 HOH HOH . G 4 HOH A 37 537 286 HOH HOH . G 4 HOH A 38 538 49 HOH HOH . G 4 HOH A 39 539 42 HOH HOH . G 4 HOH A 40 540 45 HOH HOH . G 4 HOH A 41 541 199 HOH HOH . G 4 HOH A 42 542 8 HOH HOH . G 4 HOH A 43 543 19 HOH HOH . G 4 HOH A 44 544 55 HOH HOH . G 4 HOH A 45 545 170 HOH HOH . G 4 HOH A 46 546 162 HOH HOH . G 4 HOH A 47 547 179 HOH HOH . G 4 HOH A 48 548 76 HOH HOH . G 4 HOH A 49 549 201 HOH HOH . G 4 HOH A 50 550 223 HOH HOH . G 4 HOH A 51 551 128 HOH HOH . G 4 HOH A 52 552 132 HOH HOH . G 4 HOH A 53 553 172 HOH HOH . G 4 HOH A 54 554 52 HOH HOH . G 4 HOH A 55 555 160 HOH HOH . G 4 HOH A 56 556 267 HOH HOH . G 4 HOH A 57 557 47 HOH HOH . G 4 HOH A 58 558 187 HOH HOH . G 4 HOH A 59 559 121 HOH HOH . G 4 HOH A 60 560 4 HOH HOH . G 4 HOH A 61 561 291 HOH HOH . G 4 HOH A 62 562 198 HOH HOH . G 4 HOH A 63 563 264 HOH HOH . G 4 HOH A 64 564 140 HOH HOH . G 4 HOH A 65 565 210 HOH HOH . G 4 HOH A 66 566 283 HOH HOH . G 4 HOH A 67 567 138 HOH HOH . G 4 HOH A 68 568 242 HOH HOH . G 4 HOH A 69 569 43 HOH HOH . G 4 HOH A 70 570 290 HOH HOH . G 4 HOH A 71 571 211 HOH HOH . G 4 HOH A 72 572 15 HOH HOH . G 4 HOH A 73 573 280 HOH HOH . G 4 HOH A 74 574 58 HOH HOH . G 4 HOH A 75 575 240 HOH HOH . G 4 HOH A 76 576 276 HOH HOH . G 4 HOH A 77 577 218 HOH HOH . G 4 HOH A 78 578 11 HOH HOH . G 4 HOH A 79 579 288 HOH HOH . G 4 HOH A 80 580 88 HOH HOH . G 4 HOH A 81 581 182 HOH HOH . G 4 HOH A 82 582 208 HOH HOH . G 4 HOH A 83 583 212 HOH HOH . G 4 HOH A 84 584 56 HOH HOH . G 4 HOH A 85 585 109 HOH HOH . G 4 HOH A 86 586 23 HOH HOH . G 4 HOH A 87 587 122 HOH HOH . G 4 HOH A 88 588 30 HOH HOH . G 4 HOH A 89 589 7 HOH HOH . G 4 HOH A 90 590 71 HOH HOH . G 4 HOH A 91 591 293 HOH HOH . G 4 HOH A 92 592 191 HOH HOH . G 4 HOH A 93 593 256 HOH HOH . G 4 HOH A 94 594 292 HOH HOH . G 4 HOH A 95 595 206 HOH HOH . G 4 HOH A 96 596 111 HOH HOH . G 4 HOH A 97 597 48 HOH HOH . G 4 HOH A 98 598 96 HOH HOH . G 4 HOH A 99 599 270 HOH HOH . G 4 HOH A 100 600 268 HOH HOH . G 4 HOH A 101 601 46 HOH HOH . G 4 HOH A 102 602 175 HOH HOH . G 4 HOH A 103 603 205 HOH HOH . G 4 HOH A 104 604 112 HOH HOH . G 4 HOH A 105 605 94 HOH HOH . G 4 HOH A 106 606 273 HOH HOH . G 4 HOH A 107 607 163 HOH HOH . G 4 HOH A 108 608 136 HOH HOH . G 4 HOH A 109 609 35 HOH HOH . G 4 HOH A 110 610 6 HOH HOH . G 4 HOH A 111 611 228 HOH HOH . G 4 HOH A 112 612 245 HOH HOH . G 4 HOH A 113 613 152 HOH HOH . G 4 HOH A 114 614 239 HOH HOH . G 4 HOH A 115 615 82 HOH HOH . G 4 HOH A 116 616 27 HOH HOH . G 4 HOH A 117 617 141 HOH HOH . G 4 HOH A 118 618 126 HOH HOH . G 4 HOH A 119 619 193 HOH HOH . G 4 HOH A 120 620 181 HOH HOH . G 4 HOH A 121 621 167 HOH HOH . G 4 HOH A 122 622 157 HOH HOH . G 4 HOH A 123 623 100 HOH HOH . G 4 HOH A 124 624 261 HOH HOH . G 4 HOH A 125 625 220 HOH HOH . G 4 HOH A 126 626 137 HOH HOH . G 4 HOH A 127 627 176 HOH HOH . G 4 HOH A 128 628 36 HOH HOH . G 4 HOH A 129 629 233 HOH HOH . G 4 HOH A 130 630 250 HOH HOH . G 4 HOH A 131 631 40 HOH HOH . G 4 HOH A 132 632 81 HOH HOH . G 4 HOH A 133 633 133 HOH HOH . G 4 HOH A 134 634 248 HOH HOH . G 4 HOH A 135 635 257 HOH HOH . G 4 HOH A 136 636 5 HOH HOH . G 4 HOH A 137 637 117 HOH HOH . G 4 HOH A 138 638 217 HOH HOH . G 4 HOH A 139 639 278 HOH HOH . G 4 HOH A 140 640 78 HOH HOH . H 4 HOH B 1 501 234 HOH HOH . H 4 HOH B 2 502 79 HOH HOH . H 4 HOH B 3 503 39 HOH HOH . H 4 HOH B 4 504 62 HOH HOH . H 4 HOH B 5 505 232 HOH HOH . H 4 HOH B 6 506 3 HOH HOH . H 4 HOH B 7 507 146 HOH HOH . H 4 HOH B 8 508 254 HOH HOH . H 4 HOH B 9 509 185 HOH HOH . H 4 HOH B 10 510 127 HOH HOH . H 4 HOH B 11 511 129 HOH HOH . H 4 HOH B 12 512 107 HOH HOH . H 4 HOH B 13 513 275 HOH HOH . H 4 HOH B 14 514 61 HOH HOH . H 4 HOH B 15 515 99 HOH HOH . H 4 HOH B 16 516 44 HOH HOH . H 4 HOH B 17 517 200 HOH HOH . H 4 HOH B 18 518 116 HOH HOH . H 4 HOH B 19 519 186 HOH HOH . H 4 HOH B 20 520 173 HOH HOH . H 4 HOH B 21 521 153 HOH HOH . H 4 HOH B 22 522 104 HOH HOH . H 4 HOH B 23 523 9 HOH HOH . H 4 HOH B 24 524 197 HOH HOH . H 4 HOH B 25 525 50 HOH HOH . H 4 HOH B 26 526 139 HOH HOH . H 4 HOH B 27 527 274 HOH HOH . H 4 HOH B 28 528 246 HOH HOH . H 4 HOH B 29 529 32 HOH HOH . H 4 HOH B 30 530 161 HOH HOH . H 4 HOH B 31 531 14 HOH HOH . H 4 HOH B 32 532 142 HOH HOH . H 4 HOH B 33 533 168 HOH HOH . H 4 HOH B 34 534 269 HOH HOH . H 4 HOH B 35 535 54 HOH HOH . H 4 HOH B 36 536 95 HOH HOH . H 4 HOH B 37 537 83 HOH HOH . H 4 HOH B 38 538 165 HOH HOH . H 4 HOH B 39 539 183 HOH HOH . H 4 HOH B 40 540 51 HOH HOH . H 4 HOH B 41 541 190 HOH HOH . H 4 HOH B 42 542 21 HOH HOH . H 4 HOH B 43 543 249 HOH HOH . H 4 HOH B 44 544 37 HOH HOH . H 4 HOH B 45 545 204 HOH HOH . H 4 HOH B 46 546 106 HOH HOH . H 4 HOH B 47 547 97 HOH HOH . H 4 HOH B 48 548 221 HOH HOH . H 4 HOH B 49 549 17 HOH HOH . H 4 HOH B 50 550 258 HOH HOH . H 4 HOH B 51 551 192 HOH HOH . H 4 HOH B 52 552 224 HOH HOH . H 4 HOH B 53 553 63 HOH HOH . H 4 HOH B 54 554 194 HOH HOH . H 4 HOH B 55 555 263 HOH HOH . H 4 HOH B 56 556 22 HOH HOH . H 4 HOH B 57 557 287 HOH HOH . H 4 HOH B 58 558 115 HOH HOH . H 4 HOH B 59 559 231 HOH HOH . H 4 HOH B 60 560 120 HOH HOH . H 4 HOH B 61 561 108 HOH HOH . H 4 HOH B 62 562 103 HOH HOH . H 4 HOH B 63 563 134 HOH HOH . H 4 HOH B 64 564 118 HOH HOH . H 4 HOH B 65 565 215 HOH HOH . H 4 HOH B 66 566 203 HOH HOH . H 4 HOH B 67 567 227 HOH HOH . H 4 HOH B 68 568 18 HOH HOH . H 4 HOH B 69 569 102 HOH HOH . H 4 HOH B 70 570 236 HOH HOH . H 4 HOH B 71 571 294 HOH HOH . H 4 HOH B 72 572 296 HOH HOH . H 4 HOH B 73 573 65 HOH HOH . H 4 HOH B 74 574 155 HOH HOH . H 4 HOH B 75 575 64 HOH HOH . H 4 HOH B 76 576 38 HOH HOH . H 4 HOH B 77 577 169 HOH HOH . H 4 HOH B 78 578 67 HOH HOH . H 4 HOH B 79 579 124 HOH HOH . H 4 HOH B 80 580 235 HOH HOH . H 4 HOH B 81 581 33 HOH HOH . H 4 HOH B 82 582 262 HOH HOH . H 4 HOH B 83 583 209 HOH HOH . H 4 HOH B 84 584 237 HOH HOH . H 4 HOH B 85 585 130 HOH HOH . H 4 HOH B 86 586 72 HOH HOH . H 4 HOH B 87 587 202 HOH HOH . H 4 HOH B 88 588 189 HOH HOH . H 4 HOH B 89 589 226 HOH HOH . H 4 HOH B 90 590 277 HOH HOH . H 4 HOH B 91 591 28 HOH HOH . H 4 HOH B 92 592 272 HOH HOH . H 4 HOH B 93 593 271 HOH HOH . H 4 HOH B 94 594 238 HOH HOH . H 4 HOH B 95 595 295 HOH HOH . H 4 HOH B 96 596 123 HOH HOH . H 4 HOH B 97 597 164 HOH HOH . H 4 HOH B 98 598 184 HOH HOH . H 4 HOH B 99 599 284 HOH HOH . H 4 HOH B 100 600 281 HOH HOH . H 4 HOH B 101 601 177 HOH HOH . H 4 HOH B 102 602 279 HOH HOH . H 4 HOH B 103 603 24 HOH HOH . H 4 HOH B 104 604 225 HOH HOH . H 4 HOH B 105 605 110 HOH HOH . H 4 HOH B 106 606 113 HOH HOH . H 4 HOH B 107 607 93 HOH HOH . H 4 HOH B 108 608 131 HOH HOH . H 4 HOH B 109 609 259 HOH HOH . H 4 HOH B 110 610 289 HOH HOH . H 4 HOH B 111 611 241 HOH HOH . H 4 HOH B 112 612 243 HOH HOH . H 4 HOH B 113 613 101 HOH HOH . H 4 HOH B 114 614 252 HOH HOH . H 4 HOH B 115 615 178 HOH HOH . H 4 HOH B 116 616 80 HOH HOH . H 4 HOH B 117 617 244 HOH HOH . H 4 HOH B 118 618 114 HOH HOH . H 4 HOH B 119 619 148 HOH HOH . H 4 HOH B 120 620 84 HOH HOH . H 4 HOH B 121 621 265 HOH HOH . H 4 HOH B 122 622 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C CO3 . . . E 2 89.561 65.862 4.527 1 34 ? C CO3 401 B 1 HETATM 2 O O1 CO3 . . . E 2 89.654 65.345 3.432 1 33.36 ? O1 CO3 401 B 1 HETATM 3 O O2 CO3 . . . E 2 88.563 66.487 4.8 1 33.1 ? O2 CO3 401 B 1 HETATM 4 O O3 CO3 . . . E 2 90.49 65.807 5.323 1 40.55 ? O3 CO3 401 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #