data_5Z9Z # _model_server_result.job_id w5CGX1bmYxLLzGfosbLezQ _model_server_result.datetime_utc '2024-11-22 11:50:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5z9z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 5Z9Z # _exptl.entry_id 5Z9Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 189.1 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRATE ANION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5Z9Z _cell.length_a 41.132 _cell.length_b 65.62 _cell.length_c 74.73 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5Z9Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 2 A SER 308 1_555 A N MSE 3 A MSE 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C MSE 3 A MSE 309 1_555 A N LEU 4 A LEU 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 A C GLU 70 A GLU 376 1_555 A N MSE 71 A MSE 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 A C MSE 71 A MSE 377 1_555 A N THR 72 A THR 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 A C LYS 98 A LYS 404 1_555 A N MSE 99 A MSE 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale6 A C MSE 99 A MSE 405 1_555 A N VAL 100 A VAL 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C6 H5 O7 -3' _chem_comp.formula_weight 189.1 _chem_comp.id FLC _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRATE ANION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAC CA FLC sing 83 n n CAC OA1 FLC doub 84 n n CAC OA2 FLC sing 85 n n CA CB FLC sing 86 n n CA HA1 FLC sing 87 n n CA HA2 FLC sing 88 n n CB CBC FLC sing 89 n n CB CG FLC sing 90 n n CB OHB FLC sing 91 n n CBC OB1 FLC doub 92 n n CBC OB2 FLC sing 93 n n CG CGC FLC sing 94 n n CG HG1 FLC sing 95 n n CG HG2 FLC sing 96 n n CGC OG1 FLC doub 97 n n CGC OG2 FLC sing 98 n n OHB HOB FLC sing 99 n n # _atom_sites.entry_id 5Z9Z _atom_sites.fract_transf_matrix[1][1] 0.024312 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015239 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013382 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FLC A 1 501 501 FLC FLC . C 2 FLC A 1 502 502 FLC FLC . D 3 HOH A 1 601 601 HOH HOH . D 3 HOH A 2 602 602 HOH HOH . D 3 HOH A 3 603 603 HOH HOH . D 3 HOH A 4 604 604 HOH HOH . D 3 HOH A 5 605 605 HOH HOH . D 3 HOH A 6 606 606 HOH HOH . D 3 HOH A 7 607 607 HOH HOH . D 3 HOH A 8 608 608 HOH HOH . D 3 HOH A 9 609 609 HOH HOH . D 3 HOH A 10 610 610 HOH HOH . D 3 HOH A 11 611 611 HOH HOH . D 3 HOH A 12 612 612 HOH HOH . D 3 HOH A 13 613 613 HOH HOH . D 3 HOH A 14 614 614 HOH HOH . D 3 HOH A 15 615 615 HOH HOH . D 3 HOH A 16 616 616 HOH HOH . D 3 HOH A 17 617 617 HOH HOH . D 3 HOH A 18 618 618 HOH HOH . D 3 HOH A 19 619 619 HOH HOH . D 3 HOH A 20 620 620 HOH HOH . D 3 HOH A 21 621 621 HOH HOH . D 3 HOH A 22 622 622 HOH HOH . D 3 HOH A 23 623 623 HOH HOH . D 3 HOH A 24 624 624 HOH HOH . D 3 HOH A 25 625 625 HOH HOH . D 3 HOH A 26 626 626 HOH HOH . D 3 HOH A 27 627 627 HOH HOH . D 3 HOH A 28 628 628 HOH HOH . D 3 HOH A 29 629 629 HOH HOH . D 3 HOH A 30 630 630 HOH HOH . D 3 HOH A 31 631 631 HOH HOH . D 3 HOH A 32 632 632 HOH HOH . D 3 HOH A 33 633 633 HOH HOH . D 3 HOH A 34 634 634 HOH HOH . D 3 HOH A 35 635 635 HOH HOH . D 3 HOH A 36 636 636 HOH HOH . D 3 HOH A 37 637 637 HOH HOH . D 3 HOH A 38 638 638 HOH HOH . D 3 HOH A 39 639 639 HOH HOH . D 3 HOH A 40 640 640 HOH HOH . D 3 HOH A 41 641 641 HOH HOH . D 3 HOH A 42 642 642 HOH HOH . D 3 HOH A 43 643 643 HOH HOH . D 3 HOH A 44 644 644 HOH HOH . D 3 HOH A 45 645 645 HOH HOH . D 3 HOH A 46 646 646 HOH HOH . D 3 HOH A 47 647 647 HOH HOH . D 3 HOH A 48 648 648 HOH HOH . D 3 HOH A 49 649 649 HOH HOH . D 3 HOH A 50 650 650 HOH HOH . D 3 HOH A 51 651 651 HOH HOH . D 3 HOH A 52 652 652 HOH HOH . D 3 HOH A 53 653 653 HOH HOH . D 3 HOH A 54 654 654 HOH HOH . D 3 HOH A 55 655 655 HOH HOH . D 3 HOH A 56 656 656 HOH HOH . D 3 HOH A 57 657 657 HOH HOH . D 3 HOH A 58 658 658 HOH HOH . D 3 HOH A 59 659 659 HOH HOH . D 3 HOH A 60 660 660 HOH HOH . D 3 HOH A 61 661 661 HOH HOH . D 3 HOH A 62 662 662 HOH HOH . D 3 HOH A 63 663 663 HOH HOH . D 3 HOH A 64 664 664 HOH HOH . D 3 HOH A 65 665 665 HOH HOH . D 3 HOH A 66 666 666 HOH HOH . D 3 HOH A 67 667 667 HOH HOH . D 3 HOH A 68 668 668 HOH HOH . D 3 HOH A 69 669 669 HOH HOH . D 3 HOH A 70 670 670 HOH HOH . D 3 HOH A 71 671 671 HOH HOH . D 3 HOH A 72 672 672 HOH HOH . D 3 HOH A 73 673 673 HOH HOH . D 3 HOH A 74 674 674 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAC FLC . . . C 2 18.231 3.888 38.561 1 51.24 ? CAC FLC 502 A 1 HETATM 2 C CA FLC . . . C 2 19.751 4.026 38.672 1 40.22 ? CA FLC 502 A 1 HETATM 3 C CB FLC . . . C 2 20.146 5.137 39.648 1 27.36 ? CB FLC 502 A 1 HETATM 4 C CBC FLC . . . C 2 19.786 4.707 41.067 1 24.58 ? CBC FLC 502 A 1 HETATM 5 C CG FLC . . . C 2 21.653 5.383 39.56 1 26.7 ? CG FLC 502 A 1 HETATM 6 C CGC FLC . . . C 2 22.121 5.408 38.102 1 41.51 ? CGC FLC 502 A 1 HETATM 7 O OA1 FLC . . . C 2 17.676 4.004 37.437 1 55.89 ? OA1 FLC 502 A 1 HETATM 8 O OA2 FLC . . . C 2 17.53 3.646 39.579 1 50.99 ? OA2 FLC 502 A 1 HETATM 9 O OB1 FLC . . . C 2 20.259 3.642 41.546 1 25.99 ? OB1 FLC 502 A 1 HETATM 10 O OB2 FLC . . . C 2 19.005 5.417 41.751 1 32.6 ? OB2 FLC 502 A 1 HETATM 11 O OG1 FLC . . . C 2 21.887 6.408 37.372 1 40.98 ? OG1 FLC 502 A 1 HETATM 12 O OG2 FLC . . . C 2 22.753 4.427 37.627 1 44.44 ? OG2 FLC 502 A 1 HETATM 13 O OHB FLC . . . C 2 19.454 6.322 39.36 1 24.63 ? OHB FLC 502 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 1141 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #