data_5ZAE # _model_server_result.job_id PFdccGOq1M9atXGXafkpcw _model_server_result.datetime_utc '2024-11-05 04:51:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zae # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5ZAE # _exptl.entry_id 5ZAE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 343.384 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-azanyl-5-(azepan-1-yl)-N-carbamimidoyl-6-(furan-2-yl)pyrazine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5ZAE _cell.length_a 120.33 _cell.length_b 120.33 _cell.length_c 42.59 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZAE _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 U CYS 42 1_555 A SG CYS 47 U CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 39 U CYS 50 1_555 A SG CYS 110 U CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? disulf ? disulf3 A SG CYS 135 U CYS 136 1_555 A SG CYS 204 U CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf4 A SG CYS 167 U CYS 168 1_555 A SG CYS 183 U CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf5 A SG CYS 194 U CYS 191 1_555 A SG CYS 222 U CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? # _chem_comp.formula 'C16 H21 N7 O2' _chem_comp.formula_weight 343.384 _chem_comp.id EAU _chem_comp.mon_nstd_flag . _chem_comp.name 3-azanyl-5-(azepan-1-yl)-N-carbamimidoyl-6-(furan-2-yl)pyrazine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N3 C3 EAU sing 83 n n O1 C6 EAU doub 84 n n C3 N1 EAU doub 85 n y C3 C4 EAU sing 86 n y N6 C13 EAU doub 87 n n C6 C4 EAU sing 88 n n C6 N5 EAU sing 89 n n N1 C2 EAU sing 90 n y C4 N2 EAU doub 91 n y C11 C12 EAU sing 92 n n C11 C10 EAU sing 93 n n C13 N5 EAU sing 94 n n C13 N7 EAU sing 95 n n C12 N4 EAU sing 96 n n C2 N4 EAU sing 97 n n C2 C1 EAU doub 98 n y N2 C1 EAU sing 99 n y N4 C7 EAU sing 100 n n C10 C9 EAU sing 101 n n C1 C5 EAU sing 102 n n C7 C8 EAU sing 103 n n C9 C8 EAU sing 104 n n C5 C14 EAU doub 105 n y C5 O2 EAU sing 106 n y C14 C15 EAU sing 107 n y O2 C16 EAU sing 108 n y C15 C16 EAU doub 109 n y N3 H1 EAU sing 110 n n N3 H2 EAU sing 111 n n N5 H3 EAU sing 112 n n C7 H4 EAU sing 113 n n C7 H5 EAU sing 114 n n C8 H6 EAU sing 115 n n C8 H7 EAU sing 116 n n C9 H8 EAU sing 117 n n C9 H9 EAU sing 118 n n C10 H10 EAU sing 119 n n C10 H11 EAU sing 120 n n N7 H12 EAU sing 121 n n N7 H13 EAU sing 122 n n N6 H14 EAU sing 123 n n C14 H15 EAU sing 124 n n C15 H16 EAU sing 125 n n C16 H17 EAU sing 126 n n C12 H18 EAU sing 127 n n C12 H19 EAU sing 128 n n C11 H20 EAU sing 129 n n C11 H21 EAU sing 130 n n # _atom_sites.entry_id 5ZAE _atom_sites.fract_transf_matrix[1][1] 0.00831 _atom_sites.fract_transf_matrix[1][2] 0.004798 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009596 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02348 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EAU U 1 301 301 EAU EAU . C 3 SO4 U 1 302 302 SO4 SO4 . D 4 HOH U 1 401 401 HOH HOH . D 4 HOH U 2 402 402 HOH HOH . D 4 HOH U 3 403 403 HOH HOH . D 4 HOH U 4 404 404 HOH HOH . D 4 HOH U 5 405 405 HOH HOH . D 4 HOH U 6 406 406 HOH HOH . D 4 HOH U 7 407 407 HOH HOH . D 4 HOH U 8 408 408 HOH HOH . D 4 HOH U 9 409 409 HOH HOH . D 4 HOH U 10 410 410 HOH HOH . D 4 HOH U 11 411 411 HOH HOH . D 4 HOH U 12 412 412 HOH HOH . D 4 HOH U 13 413 413 HOH HOH . D 4 HOH U 14 414 414 HOH HOH . D 4 HOH U 15 415 415 HOH HOH . D 4 HOH U 16 416 416 HOH HOH . D 4 HOH U 17 417 417 HOH HOH . D 4 HOH U 18 418 418 HOH HOH . D 4 HOH U 19 419 419 HOH HOH . D 4 HOH U 20 420 420 HOH HOH . D 4 HOH U 21 421 421 HOH HOH . D 4 HOH U 22 422 422 HOH HOH . D 4 HOH U 23 423 423 HOH HOH . D 4 HOH U 24 424 424 HOH HOH . D 4 HOH U 25 425 425 HOH HOH . D 4 HOH U 26 426 426 HOH HOH . D 4 HOH U 27 427 427 HOH HOH . D 4 HOH U 28 428 428 HOH HOH . D 4 HOH U 29 429 429 HOH HOH . D 4 HOH U 30 430 431 HOH HOH . D 4 HOH U 31 431 430 HOH HOH . D 4 HOH U 32 432 432 HOH HOH . D 4 HOH U 33 433 433 HOH HOH . D 4 HOH U 34 434 434 HOH HOH . D 4 HOH U 35 435 435 HOH HOH . D 4 HOH U 36 436 436 HOH HOH . D 4 HOH U 37 437 437 HOH HOH . D 4 HOH U 38 438 438 HOH HOH . D 4 HOH U 39 439 439 HOH HOH . D 4 HOH U 40 440 440 HOH HOH . D 4 HOH U 41 441 441 HOH HOH . D 4 HOH U 42 442 442 HOH HOH . D 4 HOH U 43 443 443 HOH HOH . D 4 HOH U 44 444 444 HOH HOH . D 4 HOH U 45 445 445 HOH HOH . D 4 HOH U 46 446 446 HOH HOH . D 4 HOH U 47 447 447 HOH HOH . D 4 HOH U 48 448 448 HOH HOH . D 4 HOH U 49 449 449 HOH HOH . D 4 HOH U 50 450 450 HOH HOH . D 4 HOH U 51 451 451 HOH HOH . D 4 HOH U 52 452 452 HOH HOH . D 4 HOH U 53 453 453 HOH HOH . D 4 HOH U 54 454 454 HOH HOH . D 4 HOH U 55 455 455 HOH HOH . D 4 HOH U 56 456 456 HOH HOH . D 4 HOH U 57 457 457 HOH HOH . D 4 HOH U 58 458 458 HOH HOH . D 4 HOH U 59 459 459 HOH HOH . D 4 HOH U 60 460 460 HOH HOH . D 4 HOH U 61 461 461 HOH HOH . D 4 HOH U 62 462 462 HOH HOH . D 4 HOH U 63 463 463 HOH HOH . D 4 HOH U 64 464 464 HOH HOH . D 4 HOH U 65 465 465 HOH HOH . D 4 HOH U 66 466 466 HOH HOH . D 4 HOH U 67 467 467 HOH HOH . D 4 HOH U 68 468 468 HOH HOH . D 4 HOH U 69 469 469 HOH HOH . D 4 HOH U 70 470 470 HOH HOH . D 4 HOH U 71 471 471 HOH HOH . D 4 HOH U 72 472 472 HOH HOH . D 4 HOH U 73 473 473 HOH HOH . D 4 HOH U 74 474 474 HOH HOH . D 4 HOH U 75 475 475 HOH HOH . D 4 HOH U 76 476 476 HOH HOH . D 4 HOH U 77 477 477 HOH HOH . D 4 HOH U 78 478 478 HOH HOH . D 4 HOH U 79 479 479 HOH HOH . D 4 HOH U 80 480 480 HOH HOH . D 4 HOH U 81 481 481 HOH HOH . D 4 HOH U 82 482 482 HOH HOH . D 4 HOH U 83 483 483 HOH HOH . D 4 HOH U 84 484 484 HOH HOH . D 4 HOH U 85 485 485 HOH HOH . D 4 HOH U 86 486 486 HOH HOH . D 4 HOH U 87 487 487 HOH HOH . D 4 HOH U 88 488 488 HOH HOH . D 4 HOH U 89 489 489 HOH HOH . D 4 HOH U 90 490 490 HOH HOH . D 4 HOH U 91 491 491 HOH HOH . D 4 HOH U 92 492 492 HOH HOH . D 4 HOH U 93 493 493 HOH HOH . D 4 HOH U 94 494 494 HOH HOH . D 4 HOH U 95 495 495 HOH HOH . D 4 HOH U 96 496 496 HOH HOH . D 4 HOH U 97 497 497 HOH HOH . D 4 HOH U 98 498 498 HOH HOH . D 4 HOH U 99 499 499 HOH HOH . D 4 HOH U 100 500 500 HOH HOH . D 4 HOH U 101 501 501 HOH HOH . D 4 HOH U 102 502 502 HOH HOH . D 4 HOH U 103 503 503 HOH HOH . D 4 HOH U 104 504 504 HOH HOH . D 4 HOH U 105 505 505 HOH HOH . D 4 HOH U 106 506 506 HOH HOH . D 4 HOH U 107 507 507 HOH HOH . D 4 HOH U 108 508 508 HOH HOH . D 4 HOH U 109 509 509 HOH HOH . D 4 HOH U 110 510 510 HOH HOH . D 4 HOH U 111 511 511 HOH HOH . D 4 HOH U 112 512 512 HOH HOH . D 4 HOH U 113 513 513 HOH HOH . D 4 HOH U 114 514 514 HOH HOH . D 4 HOH U 115 515 515 HOH HOH . D 4 HOH U 116 516 516 HOH HOH . D 4 HOH U 117 517 517 HOH HOH . D 4 HOH U 118 518 518 HOH HOH . D 4 HOH U 119 519 519 HOH HOH . D 4 HOH U 120 520 520 HOH HOH . D 4 HOH U 121 521 521 HOH HOH . D 4 HOH U 122 522 522 HOH HOH . D 4 HOH U 123 523 523 HOH HOH . D 4 HOH U 124 524 524 HOH HOH . D 4 HOH U 125 525 525 HOH HOH . D 4 HOH U 126 526 526 HOH HOH . D 4 HOH U 127 527 527 HOH HOH . D 4 HOH U 128 528 528 HOH HOH . D 4 HOH U 129 529 529 HOH HOH . D 4 HOH U 130 530 530 HOH HOH . D 4 HOH U 131 531 531 HOH HOH . D 4 HOH U 132 532 532 HOH HOH . D 4 HOH U 133 533 533 HOH HOH . D 4 HOH U 134 534 534 HOH HOH . D 4 HOH U 135 535 535 HOH HOH . D 4 HOH U 136 536 536 HOH HOH . D 4 HOH U 137 537 537 HOH HOH . D 4 HOH U 138 538 538 HOH HOH . D 4 HOH U 139 539 539 HOH HOH . D 4 HOH U 140 540 540 HOH HOH . D 4 HOH U 141 541 541 HOH HOH . D 4 HOH U 142 542 542 HOH HOH . D 4 HOH U 143 543 543 HOH HOH . D 4 HOH U 144 544 544 HOH HOH . D 4 HOH U 145 545 545 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EAU . . . B 2 -27.449 -16.192 -3.448 1 22.72 ? N1 EAU 301 U 1 HETATM 2 C C2 EAU . . . B 2 -27.044 -16.317 -2.15 1 24.05 ? C2 EAU 301 U 1 HETATM 3 O O2 EAU . . . B 2 -28.38 -17.298 1.101 1 29.47 ? O2 EAU 301 U 1 HETATM 4 N N3 EAU . . . B 2 -28.841 -16.708 -5.247 1 23.08 ? N3 EAU 301 U 1 HETATM 5 C C4 EAU . . . B 2 -29.171 -17.76 -3.15 1 21.79 ? C4 EAU 301 U 1 HETATM 6 N N5 EAU . . . B 2 -31.023 -19.133 -2.592 1 20.21 ? N5 EAU 301 U 1 HETATM 7 C C6 EAU . . . B 2 -30.338 -18.574 -3.598 1 20.43 ? C6 EAU 301 U 1 HETATM 8 C C7 EAU . . . B 2 -25.415 -15.435 -0.385 1 28.34 ? C7 EAU 301 U 1 HETATM 9 C C8 EAU . . . B 2 -26.129 -14.257 0.261 1 28.62 ? C8 EAU 301 U 1 HETATM 10 C C9 EAU . . . B 2 -25.591 -12.952 -0.321 1 28.91 ? C9 EAU 301 U 1 HETATM 11 C C10 EAU . . . B 2 -26.359 -12.532 -1.569 1 28.39 ? C10 EAU 301 U 1 HETATM 12 O O1 EAU . . . B 2 -30.643 -18.679 -4.765 1 19.44 ? O1 EAU 301 U 1 HETATM 13 C C13 EAU . . . B 2 -31.882 -20.128 -2.737 1 19.27 ? C13 EAU 301 U 1 HETATM 14 N N7 EAU . . . B 2 -32.499 -20.573 -1.634 1 18.75 ? N7 EAU 301 U 1 HETATM 15 N N6 EAU . . . B 2 -32.112 -20.654 -3.947 1 18.35 ? N6 EAU 301 U 1 HETATM 16 C C3 EAU . . . B 2 -28.481 -16.885 -3.954 1 22.34 ? C3 EAU 301 U 1 HETATM 17 N N2 EAU . . . B 2 -28.812 -17.907 -1.864 1 22.27 ? N2 EAU 301 U 1 HETATM 18 C C1 EAU . . . B 2 -27.775 -17.22 -1.352 1 24.18 ? C1 EAU 301 U 1 HETATM 19 C C5 EAU . . . B 2 -27.54 -17.573 0.061 1 26.18 ? C5 EAU 301 U 1 HETATM 20 C C14 EAU . . . B 2 -26.466 -18.325 0.529 1 26.84 ? C14 EAU 301 U 1 HETATM 21 C C15 EAU . . . B 2 -26.627 -18.459 1.892 1 28.06 ? C15 EAU 301 U 1 HETATM 22 C C16 EAU . . . B 2 -27.8 -17.828 2.242 1 29.16 ? C16 EAU 301 U 1 HETATM 23 N N4 EAU . . . B 2 -25.955 -15.51 -1.741 1 25.85 ? N4 EAU 301 U 1 HETATM 24 C C12 EAU . . . B 2 -25.274 -14.632 -2.678 1 26.32 ? C12 EAU 301 U 1 HETATM 25 C C11 EAU . . . B 2 -26.027 -13.312 -2.849 1 26.99 ? C11 EAU 301 U 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #