data_5ZAF # _model_server_result.job_id a1XDXJOOvwQWjajVNxZxlA _model_server_result.datetime_utc '2024-11-05 04:46:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zaf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5ZAF # _exptl.entry_id 5ZAF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 343.384 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-azanyl-5-(azepan-1-yl)-N-carbamimidoyl-6-(furan-3-yl)pyrazine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5ZAF _cell.length_a 120.851 _cell.length_b 120.851 _cell.length_c 42.864 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZAF _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 U CYS 42 1_555 A SG CYS 47 U CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 39 U CYS 50 1_555 A SG CYS 110 U CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf3 A SG CYS 135 U CYS 136 1_555 A SG CYS 204 U CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf4 A SG CYS 167 U CYS 168 1_555 A SG CYS 183 U CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf5 A SG CYS 194 U CYS 191 1_555 A SG CYS 222 U CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? # _chem_comp.formula 'C16 H21 N7 O2' _chem_comp.formula_weight 343.384 _chem_comp.id 28I _chem_comp.mon_nstd_flag . _chem_comp.name 3-azanyl-5-(azepan-1-yl)-N-carbamimidoyl-6-(furan-3-yl)pyrazine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N3 C4 28I sing 1 n n O1 C6 28I doub 2 n n N6 C7 28I doub 3 n n C4 N1 28I doub 4 n y C4 C3 28I sing 5 n y C6 C3 28I sing 6 n n C6 N5 28I sing 7 n n N1 C1 28I sing 8 n y C3 N2 28I doub 9 n y C7 N5 28I sing 10 n n C7 N7 28I sing 11 n n C12 C11 28I sing 12 n n C12 C13 28I sing 13 n n C11 N4 28I sing 14 n n C1 N4 28I sing 15 n n C1 C2 28I doub 16 n y N2 C2 28I sing 17 n y C13 C14 28I sing 18 n n N4 C16 28I sing 19 n n C2 C5 28I sing 20 n n C16 C15 28I sing 21 n n C14 C15 28I sing 22 n n C5 C10 28I doub 23 n y C5 C8 28I sing 24 n y C10 O2 28I sing 25 n y C8 C9 28I doub 26 n y O2 C9 28I sing 27 n y N6 H1 28I sing 28 n n C9 H2 28I sing 29 n n C10 H3 28I sing 30 n n C11 H4 28I sing 31 n n C11 H5 28I sing 32 n n C12 H6 28I sing 33 n n C12 H7 28I sing 34 n n C14 H8 28I sing 35 n n C14 H9 28I sing 36 n n N3 H10 28I sing 37 n n N3 H11 28I sing 38 n n N5 H12 28I sing 39 n n N7 H13 28I sing 40 n n N7 H14 28I sing 41 n n C8 H15 28I sing 42 n n C16 H16 28I sing 43 n n C16 H17 28I sing 44 n n C15 H18 28I sing 45 n n C15 H19 28I sing 46 n n C13 H20 28I sing 47 n n C13 H21 28I sing 48 n n # _atom_sites.entry_id 5ZAF _atom_sites.fract_transf_matrix[1][1] 0.008275 _atom_sites.fract_transf_matrix[1][2] 0.004777 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009555 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02333 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 28I U 1 301 301 28I 28I . C 3 HOH U 1 401 401 HOH HOH . C 3 HOH U 2 402 402 HOH HOH . C 3 HOH U 3 403 403 HOH HOH . C 3 HOH U 4 404 404 HOH HOH . C 3 HOH U 5 405 405 HOH HOH . C 3 HOH U 6 406 406 HOH HOH . C 3 HOH U 7 407 407 HOH HOH . C 3 HOH U 8 408 408 HOH HOH . C 3 HOH U 9 409 409 HOH HOH . C 3 HOH U 10 410 410 HOH HOH . C 3 HOH U 11 411 411 HOH HOH . C 3 HOH U 12 412 412 HOH HOH . C 3 HOH U 13 413 413 HOH HOH . C 3 HOH U 14 414 414 HOH HOH . C 3 HOH U 15 415 415 HOH HOH . C 3 HOH U 16 416 416 HOH HOH . C 3 HOH U 17 417 417 HOH HOH . C 3 HOH U 18 418 418 HOH HOH . C 3 HOH U 19 419 419 HOH HOH . C 3 HOH U 20 420 420 HOH HOH . C 3 HOH U 21 421 422 HOH HOH . C 3 HOH U 22 422 421 HOH HOH . C 3 HOH U 23 423 423 HOH HOH . C 3 HOH U 24 424 424 HOH HOH . C 3 HOH U 25 425 425 HOH HOH . C 3 HOH U 26 426 426 HOH HOH . C 3 HOH U 27 427 427 HOH HOH . C 3 HOH U 28 428 428 HOH HOH . C 3 HOH U 29 429 429 HOH HOH . C 3 HOH U 30 430 430 HOH HOH . C 3 HOH U 31 431 431 HOH HOH . C 3 HOH U 32 432 432 HOH HOH . C 3 HOH U 33 433 433 HOH HOH . C 3 HOH U 34 434 434 HOH HOH . C 3 HOH U 35 435 435 HOH HOH . C 3 HOH U 36 436 436 HOH HOH . C 3 HOH U 37 437 437 HOH HOH . C 3 HOH U 38 438 438 HOH HOH . C 3 HOH U 39 439 439 HOH HOH . C 3 HOH U 40 440 440 HOH HOH . C 3 HOH U 41 441 441 HOH HOH . C 3 HOH U 42 442 442 HOH HOH . C 3 HOH U 43 443 443 HOH HOH . C 3 HOH U 44 444 444 HOH HOH . C 3 HOH U 45 445 445 HOH HOH . C 3 HOH U 46 446 446 HOH HOH . C 3 HOH U 47 447 447 HOH HOH . C 3 HOH U 48 448 448 HOH HOH . C 3 HOH U 49 449 449 HOH HOH . C 3 HOH U 50 450 450 HOH HOH . C 3 HOH U 51 451 451 HOH HOH . C 3 HOH U 52 452 452 HOH HOH . C 3 HOH U 53 453 453 HOH HOH . C 3 HOH U 54 454 454 HOH HOH . C 3 HOH U 55 455 455 HOH HOH . C 3 HOH U 56 456 456 HOH HOH . C 3 HOH U 57 457 457 HOH HOH . C 3 HOH U 58 458 458 HOH HOH . C 3 HOH U 59 459 459 HOH HOH . C 3 HOH U 60 460 460 HOH HOH . C 3 HOH U 61 461 461 HOH HOH . C 3 HOH U 62 462 462 HOH HOH . C 3 HOH U 63 463 463 HOH HOH . C 3 HOH U 64 464 464 HOH HOH . C 3 HOH U 65 465 465 HOH HOH . C 3 HOH U 66 466 466 HOH HOH . C 3 HOH U 67 467 467 HOH HOH . C 3 HOH U 68 468 468 HOH HOH . C 3 HOH U 69 469 469 HOH HOH . C 3 HOH U 70 470 470 HOH HOH . C 3 HOH U 71 471 471 HOH HOH . C 3 HOH U 72 472 472 HOH HOH . C 3 HOH U 73 473 473 HOH HOH . C 3 HOH U 74 474 474 HOH HOH . C 3 HOH U 75 475 475 HOH HOH . C 3 HOH U 76 476 476 HOH HOH . C 3 HOH U 77 477 477 HOH HOH . C 3 HOH U 78 478 478 HOH HOH . C 3 HOH U 79 479 479 HOH HOH . C 3 HOH U 80 480 480 HOH HOH . C 3 HOH U 81 481 481 HOH HOH . C 3 HOH U 82 482 482 HOH HOH . C 3 HOH U 83 483 483 HOH HOH . C 3 HOH U 84 484 484 HOH HOH . C 3 HOH U 85 485 485 HOH HOH . C 3 HOH U 86 486 486 HOH HOH . C 3 HOH U 87 487 487 HOH HOH . C 3 HOH U 88 488 488 HOH HOH . C 3 HOH U 89 489 489 HOH HOH . C 3 HOH U 90 490 490 HOH HOH . C 3 HOH U 91 491 491 HOH HOH . C 3 HOH U 92 492 492 HOH HOH . C 3 HOH U 93 493 493 HOH HOH . C 3 HOH U 94 494 494 HOH HOH . C 3 HOH U 95 495 495 HOH HOH . C 3 HOH U 96 496 496 HOH HOH . C 3 HOH U 97 497 497 HOH HOH . C 3 HOH U 98 498 498 HOH HOH . C 3 HOH U 99 499 499 HOH HOH . C 3 HOH U 100 500 500 HOH HOH . C 3 HOH U 101 501 501 HOH HOH . C 3 HOH U 102 502 502 HOH HOH . C 3 HOH U 103 503 503 HOH HOH . C 3 HOH U 104 504 504 HOH HOH . C 3 HOH U 105 505 505 HOH HOH . C 3 HOH U 106 506 506 HOH HOH . C 3 HOH U 107 507 507 HOH HOH . C 3 HOH U 108 508 508 HOH HOH . C 3 HOH U 109 509 509 HOH HOH . C 3 HOH U 110 510 510 HOH HOH . C 3 HOH U 111 511 511 HOH HOH . C 3 HOH U 112 512 512 HOH HOH . C 3 HOH U 113 513 513 HOH HOH . C 3 HOH U 114 514 514 HOH HOH . C 3 HOH U 115 515 515 HOH HOH . C 3 HOH U 116 516 516 HOH HOH . C 3 HOH U 117 517 517 HOH HOH . C 3 HOH U 118 518 518 HOH HOH . C 3 HOH U 119 519 519 HOH HOH . C 3 HOH U 120 520 520 HOH HOH . C 3 HOH U 121 521 521 HOH HOH . C 3 HOH U 122 522 522 HOH HOH . C 3 HOH U 123 523 523 HOH HOH . C 3 HOH U 124 524 524 HOH HOH . C 3 HOH U 125 525 525 HOH HOH . C 3 HOH U 126 526 526 HOH HOH . C 3 HOH U 127 527 527 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 28I . . . B 2 -0.485 31.685 26.499 1 28.35 ? C1 28I 301 U 1 HETATM 2 C C2 28I . . . B 2 -0.998 32.724 27.285 1 27.78 ? C2 28I 301 U 1 HETATM 3 N N6 28I . . . B 2 -1.739 38.306 24.603 1 21.72 ? N6 28I 301 U 1 HETATM 4 C C7 28I . . . B 2 -1.639 37.751 25.802 1 21.9 ? C7 28I 301 U 1 HETATM 5 C C9 28I . . . B 2 -1.563 33.107 30.894 1 30.46 ? C9 28I 301 U 1 HETATM 6 C C10 28I . . . B 2 -2.346 31.801 29.277 1 30 ? C10 28I 301 U 1 HETATM 7 C C11 28I . . . B 2 -0.378 29.207 26.179 1 33.17 ? C11 28I 301 U 1 HETATM 8 C C12 28I . . . B 2 1.01 28.614 25.906 1 34.76 ? C12 28I 301 U 1 HETATM 9 C C14 28I . . . B 2 1.799 28.088 28.263 1 34.5 ? C14 28I 301 U 1 HETATM 10 N N3 28I . . . B 2 -0.14 33.368 23.312 1 25.57 ? N3 28I 301 U 1 HETATM 11 C C4 28I . . . B 2 -0.435 33.171 24.627 1 25.26 ? C4 28I 301 U 1 HETATM 12 O O1 28I . . . B 2 -1.223 35.801 23.752 1 22.47 ? O1 28I 301 U 1 HETATM 13 C C6 28I . . . B 2 -1.232 35.56 24.948 1 23.05 ? C6 28I 301 U 1 HETATM 14 N N5 28I . . . B 2 -1.389 36.455 25.932 1 22.24 ? N5 28I 301 U 1 HETATM 15 N N7 28I . . . B 2 -1.762 38.44 26.85 1 22.02 ? N7 28I 301 U 1 HETATM 16 C C3 28I . . . B 2 -0.957 34.178 25.427 1 24.71 ? C3 28I 301 U 1 HETATM 17 N N1 28I . . . B 2 -0.206 31.96 25.187 1 26.95 ? N1 28I 301 U 1 HETATM 18 N N2 28I . . . B 2 -1.229 33.929 26.727 1 25.59 ? N2 28I 301 U 1 HETATM 19 C C5 28I . . . B 2 -1.397 32.646 28.717 1 28.96 ? C5 28I 301 U 1 HETATM 20 C C8 28I . . . B 2 -0.933 33.458 29.718 1 30.07 ? C8 28I 301 U 1 HETATM 21 O O2 28I . . . B 2 -2.439 32.084 30.62 1 31.46 ? O2 28I 301 U 1 HETATM 22 N N4 28I . . . B 2 -0.145 30.403 26.988 1 31.48 ? N4 28I 301 U 1 HETATM 23 C C16 28I . . . B 2 0.633 30.326 28.251 1 32.93 ? C16 28I 301 U 1 HETATM 24 C C15 28I . . . B 2 0.689 28.933 28.877 1 34.28 ? C15 28I 301 U 1 HETATM 25 C C13 28I . . . B 2 1.378 27.523 26.912 1 34.52 ? C13 28I 301 U 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #