data_5ZCL
#
_model_server_result.job_id            w-9Kmd3AG94A3pMlydqCHQ 
_model_server_result.datetime_utc      '2024-11-19 02:32:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5zcl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":401}' 
#
_entry.id    5ZCL 
#
_exptl.entry_id    5ZCL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          115.99 
_cell.angle_gamma         90 
_cell.entry_id            5ZCL 
_cell.length_a            75.096 
_cell.length_b            130.262 
_cell.length_c            80.252 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ZCL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,K,L 1 1 
C,D,H,I,J,M,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 H N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 169 A CYS 226 1_555 A SG CYS 261 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
metalc ? metalc1 A OD1 ASP 61 A ASP 118 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.88 ? 
metalc ? metalc2 A OD2 ASP 61 A ASP 118 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? 
metalc ? metalc3 A OD1 ASP 61 A ASP 118 1_555 F MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
metalc ? metalc4 A O GLY 62 A GLY 119 1_555 F MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
metalc ? metalc5 A OD1 ASP 311 A ASP 368 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? 
metalc ? metalc6 A OD2 ASP 311 A ASP 368 1_555 E MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? 
metalc ? metalc7 E MG MG . A MG 401 1_555 K O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? 
metalc ? metalc8 C OD2 ASP 61 B ASP 118 1_555 H MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? 
metalc ? metalc9 C OD1 ASP 61 B ASP 118 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
metalc ? metalc10 C O GLY 62 B GLY 119 1_555 I MG MG . B MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? 
metalc ? metalc11 C OD1 ASP 249 B ASP 306 1_555 H MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc12 C OD2 ASP 249 B ASP 306 1_555 H MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? 
metalc ? metalc13 C OD2 ASP 311 B ASP 368 1_555 H MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
metalc ? metalc14 H MG MG . B MG 401 1_555 M O HOH . B HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? 
metalc ? metalc15 I MG MG . B MG 402 1_555 M O HOH . B HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? 
metalc ? metalc16 I MG MG . B MG 402 1_555 M O HOH . B HOH 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? 
metalc ? metalc17 I MG MG . B MG 402 1_555 M O HOH . B HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5ZCL 
_atom_sites.fract_transf_matrix[1][1]    0.013316 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006493 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007677 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013863 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 MG A 1 401 5 MG MG . 
F 3 MG A 1 402 6 MG MG . 
G 4 A8S C 1 301 202 A8S A8S . 
H 3 MG B 1 401 1 MG MG . 
I 3 MG B 1 402 2 MG MG . 
J 4 A8S D 1 301 202 A8S A8S . 
K 5 HOH A 1 501 70 HOH HOH . 
K 5 HOH A 2 502 24 HOH HOH . 
K 5 HOH A 3 503 67 HOH HOH . 
K 5 HOH A 4 504 26 HOH HOH . 
K 5 HOH A 5 505 59 HOH HOH . 
K 5 HOH A 6 506 58 HOH HOH . 
K 5 HOH A 7 507 46 HOH HOH . 
K 5 HOH A 8 508 8 HOH HOH . 
K 5 HOH A 9 509 41 HOH HOH . 
K 5 HOH A 10 510 37 HOH HOH . 
K 5 HOH A 11 511 15 HOH HOH . 
K 5 HOH A 12 512 25 HOH HOH . 
K 5 HOH A 13 513 47 HOH HOH . 
K 5 HOH A 14 514 64 HOH HOH . 
K 5 HOH A 15 515 19 HOH HOH . 
K 5 HOH A 16 516 65 HOH HOH . 
K 5 HOH A 17 517 57 HOH HOH . 
K 5 HOH A 18 518 54 HOH HOH . 
K 5 HOH A 19 519 7 HOH HOH . 
K 5 HOH A 20 520 45 HOH HOH . 
K 5 HOH A 21 521 66 HOH HOH . 
K 5 HOH A 22 522 44 HOH HOH . 
K 5 HOH A 23 523 21 HOH HOH . 
K 5 HOH A 24 524 16 HOH HOH . 
K 5 HOH A 25 525 63 HOH HOH . 
K 5 HOH A 26 526 68 HOH HOH . 
K 5 HOH A 27 527 60 HOH HOH . 
K 5 HOH A 28 528 42 HOH HOH . 
K 5 HOH A 29 529 36 HOH HOH . 
K 5 HOH A 30 530 69 HOH HOH . 
K 5 HOH A 31 531 43 HOH HOH . 
K 5 HOH A 32 532 27 HOH HOH . 
L 5 HOH C 1 401 48 HOH HOH . 
L 5 HOH C 2 402 2 HOH HOH . 
L 5 HOH C 3 403 62 HOH HOH . 
L 5 HOH C 4 404 40 HOH HOH . 
L 5 HOH C 5 405 18 HOH HOH . 
L 5 HOH C 6 406 39 HOH HOH . 
L 5 HOH C 7 407 50 HOH HOH . 
L 5 HOH C 8 408 4 HOH HOH . 
L 5 HOH C 9 409 51 HOH HOH . 
L 5 HOH C 10 410 6 HOH HOH . 
L 5 HOH C 11 411 20 HOH HOH . 
L 5 HOH C 12 412 49 HOH HOH . 
L 5 HOH C 13 413 3 HOH HOH . 
L 5 HOH C 14 414 53 HOH HOH . 
L 5 HOH C 15 415 61 HOH HOH . 
L 5 HOH C 16 416 5 HOH HOH . 
L 5 HOH C 17 417 52 HOH HOH . 
L 5 HOH C 18 418 17 HOH HOH . 
M 5 HOH B 1 501 9 HOH HOH . 
M 5 HOH B 2 502 22 HOH HOH . 
M 5 HOH B 3 503 23 HOH HOH . 
M 5 HOH B 4 504 13 HOH HOH . 
M 5 HOH B 5 505 72 HOH HOH . 
M 5 HOH B 6 506 31 HOH HOH . 
M 5 HOH B 7 507 38 HOH HOH . 
M 5 HOH B 8 508 10 HOH HOH . 
M 5 HOH B 9 509 12 HOH HOH . 
M 5 HOH B 10 510 29 HOH HOH . 
M 5 HOH B 11 511 71 HOH HOH . 
M 5 HOH B 12 512 56 HOH HOH . 
M 5 HOH B 13 513 11 HOH HOH . 
M 5 HOH B 14 514 55 HOH HOH . 
M 5 HOH B 15 515 14 HOH HOH . 
N 5 HOH D 1 401 35 HOH HOH . 
N 5 HOH D 2 402 32 HOH HOH . 
N 5 HOH D 3 403 28 HOH HOH . 
N 5 HOH D 4 404 33 HOH HOH . 
N 5 HOH D 5 405 1 HOH HOH . 
N 5 HOH D 6 406 34 HOH HOH . 
N 5 HOH D 7 407 30 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         H 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               29.441 
_atom_site.Cartn_y               59.684 
_atom_site.Cartn_z               23.385 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        45.52 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              70 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#