data_5ZCY # _model_server_result.job_id It-8Ea74SYGb4SwQxzK_jw _model_server_result.datetime_utc '2025-02-05 07:46:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zcy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":101}' # _entry.id 5ZCY # _exptl.entry_id 5ZCY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5ZCY _cell.length_a 53.58 _cell.length_b 53.58 _cell.length_c 56.94 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZCY _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 239 n n N O2 NO3 sing 240 n n N O3 NO3 sing 241 n n # _atom_sites.entry_id 5ZCY _atom_sites.fract_transf_matrix[1][1] 0.018664 _atom_sites.fract_transf_matrix[1][2] 0.010776 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021551 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017562 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 101 1 NO3 NO3 . C 3 NO2 A 1 102 2 NO2 NO2 . D 4 HOH A 1 201 60 HOH HOH . D 4 HOH A 2 202 33 HOH HOH . D 4 HOH A 3 203 34 HOH HOH . D 4 HOH A 4 204 40 HOH HOH . D 4 HOH A 5 205 47 HOH HOH . D 4 HOH A 6 206 18 HOH HOH . D 4 HOH A 7 207 23 HOH HOH . D 4 HOH A 8 208 82 HOH HOH . D 4 HOH A 9 209 1 HOH HOH . D 4 HOH A 10 210 26 HOH HOH . D 4 HOH A 11 211 43 HOH HOH . D 4 HOH A 12 212 10 HOH HOH . D 4 HOH A 13 213 61 HOH HOH . D 4 HOH A 14 214 36 HOH HOH . D 4 HOH A 15 215 29 HOH HOH . D 4 HOH A 16 216 54 HOH HOH . D 4 HOH A 17 217 11 HOH HOH . D 4 HOH A 18 218 28 HOH HOH . D 4 HOH A 19 219 37 HOH HOH . D 4 HOH A 20 220 58 HOH HOH . D 4 HOH A 21 221 32 HOH HOH . D 4 HOH A 22 222 38 HOH HOH . D 4 HOH A 23 223 5 HOH HOH . D 4 HOH A 24 224 59 HOH HOH . D 4 HOH A 25 225 19 HOH HOH . D 4 HOH A 26 226 2 HOH HOH . D 4 HOH A 27 227 49 HOH HOH . D 4 HOH A 28 228 24 HOH HOH . D 4 HOH A 29 229 48 HOH HOH . D 4 HOH A 30 230 46 HOH HOH . D 4 HOH A 31 231 16 HOH HOH . D 4 HOH A 32 232 4 HOH HOH . D 4 HOH A 33 233 22 HOH HOH . D 4 HOH A 34 234 6 HOH HOH . D 4 HOH A 35 235 44 HOH HOH . D 4 HOH A 36 236 14 HOH HOH . D 4 HOH A 37 237 8 HOH HOH . D 4 HOH A 38 238 3 HOH HOH . D 4 HOH A 39 239 55 HOH HOH . D 4 HOH A 40 240 69 HOH HOH . D 4 HOH A 41 241 13 HOH HOH . D 4 HOH A 42 242 50 HOH HOH . D 4 HOH A 43 243 63 HOH HOH . D 4 HOH A 44 244 39 HOH HOH . D 4 HOH A 45 245 53 HOH HOH . D 4 HOH A 46 246 12 HOH HOH . D 4 HOH A 47 247 81 HOH HOH . D 4 HOH A 48 248 64 HOH HOH . D 4 HOH A 49 249 72 HOH HOH . D 4 HOH A 50 250 21 HOH HOH . D 4 HOH A 51 251 15 HOH HOH . D 4 HOH A 52 252 66 HOH HOH . D 4 HOH A 53 253 9 HOH HOH . D 4 HOH A 54 254 51 HOH HOH . D 4 HOH A 55 255 7 HOH HOH . D 4 HOH A 56 256 56 HOH HOH . D 4 HOH A 57 257 25 HOH HOH . D 4 HOH A 58 258 27 HOH HOH . D 4 HOH A 59 259 80 HOH HOH . D 4 HOH A 60 260 35 HOH HOH . D 4 HOH A 61 261 20 HOH HOH . D 4 HOH A 62 262 57 HOH HOH . D 4 HOH A 63 263 70 HOH HOH . D 4 HOH A 64 264 31 HOH HOH . D 4 HOH A 65 265 68 HOH HOH . D 4 HOH A 66 266 42 HOH HOH . D 4 HOH A 67 267 52 HOH HOH . D 4 HOH A 68 268 77 HOH HOH . D 4 HOH A 69 269 41 HOH HOH . D 4 HOH A 70 270 76 HOH HOH . D 4 HOH A 71 271 71 HOH HOH . D 4 HOH A 72 272 73 HOH HOH . D 4 HOH A 73 273 30 HOH HOH . D 4 HOH A 74 274 17 HOH HOH . D 4 HOH A 75 275 78 HOH HOH . D 4 HOH A 76 276 75 HOH HOH . D 4 HOH A 77 277 74 HOH HOH . D 4 HOH A 78 278 62 HOH HOH . D 4 HOH A 79 279 67 HOH HOH . D 4 HOH A 80 280 79 HOH HOH . D 4 HOH A 81 281 45 HOH HOH . D 4 HOH A 82 282 65 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . B 2 -22.743 68.824 1.017 1 17.99 ? N NO3 101 A 1 HETATM 2 O O1 NO3 . . . B 2 -23.079 67.918 0.434 1 12.18 ? O1 NO3 101 A 1 HETATM 3 O O2 NO3 . . . B 2 -22.572 70.153 0.576 1 21.89 ? O2 NO3 101 A 1 HETATM 4 O O3 NO3 . . . B 2 -22.288 68.552 2.265 1 25.51 ? O3 NO3 101 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #