data_5ZFA # _model_server_result.job_id VAC4v2xtlnsQEZpbBSyUsQ _model_server_result.datetime_utc '2024-11-07 03:01:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zfa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":409}' # _entry.id 5ZFA # _exptl.entry_id 5ZFA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 408.916 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2E,6E)-8-(3-chloro-5-formyl-2,6-dihydroxy-4-methylphenyl)-3,6-dimethylocta-2,6-dien-1-yl 2-methylpropanoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5ZFA _cell.length_a 90.497 _cell.length_b 90.497 _cell.length_c 122.667 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZFA _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H29 Cl O5' _chem_comp.formula_weight 408.916 _chem_comp.id 9BU _chem_comp.mon_nstd_flag . _chem_comp.name '(2E,6E)-8-(3-chloro-5-formyl-2,6-dihydroxy-4-methylphenyl)-3,6-dimethylocta-2,6-dien-1-yl 2-methylpropanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAB CAT 9BU sing 1 n n OAH CAW 9BU sing 2 n n CAO CAP 9BU sing 3 n n CAO CAS 9BU sing 4 n n CAT CAP 9BU sing 5 n n CAT CAM 9BU doub 6 e n CLA CAY 9BU sing 7 n n CAW CAY 9BU doub 8 n y CAW CBA 9BU sing 9 n y CAS CAL 9BU doub 10 e n CAS CAA 9BU sing 11 n n CAL CAN 9BU sing 12 n n CAM CAQ 9BU sing 13 n n CAQ CBA 9BU sing 14 n n CAY CAV 9BU sing 15 n y CBA CAX 9BU doub 16 n y CAN OAR 9BU sing 17 n n CAV CAC 9BU sing 18 n n CAV CAZ 9BU doub 19 n y OAR CAU 9BU sing 20 n n CAX CAZ 9BU sing 21 n y CAX OAI 9BU sing 22 n n CAZ CAK 9BU sing 23 n n CAU OAG 9BU doub 24 n n CAU CBB 9BU sing 25 n n CAE CBB 9BU sing 26 n n CBB CAD 9BU sing 27 n n CAK OAF 9BU doub 28 n n CAD H1 9BU sing 29 n n CAD H2 9BU sing 30 n n CAD H3 9BU sing 31 n n CBB H4 9BU sing 32 n n CAE H5 9BU sing 33 n n CAE H6 9BU sing 34 n n CAE H7 9BU sing 35 n n CAN H8 9BU sing 36 n n CAN H9 9BU sing 37 n n CAL H10 9BU sing 38 n n CAA H11 9BU sing 39 n n CAA H12 9BU sing 40 n n CAA H13 9BU sing 41 n n CAO H14 9BU sing 42 n n CAO H15 9BU sing 43 n n CAP H16 9BU sing 44 n n CAP H17 9BU sing 45 n n CAB H18 9BU sing 46 n n CAB H19 9BU sing 47 n n CAB H20 9BU sing 48 n n CAM H21 9BU sing 49 n n CAQ H22 9BU sing 50 n n CAQ H23 9BU sing 51 n n OAI H24 9BU sing 52 n n CAK H25 9BU sing 53 n n CAC H26 9BU sing 54 n n CAC H27 9BU sing 55 n n CAC H28 9BU sing 56 n n OAH H29 9BU sing 57 n n # _atom_sites.entry_id 5ZFA _atom_sites.fract_transf_matrix[1][1] 0.01105 _atom_sites.fract_transf_matrix[1][2] 0.00638 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01276 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008152 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 401 398 FMN FMN . C 3 ORO A 1 402 399 ORO ORO . D 4 ACT A 1 403 401 ACT ACT . E 4 ACT A 1 404 402 ACT ACT . F 4 ACT A 1 405 404 ACT ACT . G 5 SO4 A 1 406 405 SO4 SO4 . H 5 SO4 A 1 407 406 SO4 SO4 . I 5 SO4 A 1 408 407 SO4 SO4 . J 6 9BU A 1 409 501 9BU DRG . K 7 HOH A 1 501 942 HOH HOH . K 7 HOH A 2 502 741 HOH HOH . K 7 HOH A 3 503 875 HOH HOH . K 7 HOH A 4 504 754 HOH HOH . K 7 HOH A 5 505 773 HOH HOH . K 7 HOH A 6 506 836 HOH HOH . K 7 HOH A 7 507 725 HOH HOH . K 7 HOH A 8 508 885 HOH HOH . K 7 HOH A 9 509 718 HOH HOH . K 7 HOH A 10 510 771 HOH HOH . K 7 HOH A 11 511 722 HOH HOH . K 7 HOH A 12 512 714 HOH HOH . K 7 HOH A 13 513 819 HOH HOH . K 7 HOH A 14 514 706 HOH HOH . K 7 HOH A 15 515 858 HOH HOH . K 7 HOH A 16 516 955 HOH HOH . K 7 HOH A 17 517 829 HOH HOH . K 7 HOH A 18 518 728 HOH HOH . K 7 HOH A 19 519 710 HOH HOH . K 7 HOH A 20 520 704 HOH HOH . K 7 HOH A 21 521 905 HOH HOH . K 7 HOH A 22 522 769 HOH HOH . K 7 HOH A 23 523 861 HOH HOH . K 7 HOH A 24 524 840 HOH HOH . K 7 HOH A 25 525 709 HOH HOH . K 7 HOH A 26 526 909 HOH HOH . K 7 HOH A 27 527 730 HOH HOH . K 7 HOH A 28 528 711 HOH HOH . K 7 HOH A 29 529 832 HOH HOH . K 7 HOH A 30 530 838 HOH HOH . K 7 HOH A 31 531 764 HOH HOH . K 7 HOH A 32 532 732 HOH HOH . K 7 HOH A 33 533 749 HOH HOH . K 7 HOH A 34 534 949 HOH HOH . K 7 HOH A 35 535 760 HOH HOH . K 7 HOH A 36 536 713 HOH HOH . K 7 HOH A 37 537 850 HOH HOH . K 7 HOH A 38 538 804 HOH HOH . K 7 HOH A 39 539 860 HOH HOH . K 7 HOH A 40 540 841 HOH HOH . K 7 HOH A 41 541 717 HOH HOH . K 7 HOH A 42 542 847 HOH HOH . K 7 HOH A 43 543 823 HOH HOH . K 7 HOH A 44 544 752 HOH HOH . K 7 HOH A 45 545 796 HOH HOH . K 7 HOH A 46 546 783 HOH HOH . K 7 HOH A 47 547 744 HOH HOH . K 7 HOH A 48 548 772 HOH HOH . K 7 HOH A 49 549 776 HOH HOH . K 7 HOH A 50 550 715 HOH HOH . K 7 HOH A 51 551 768 HOH HOH . K 7 HOH A 52 552 719 HOH HOH . K 7 HOH A 53 553 707 HOH HOH . K 7 HOH A 54 554 825 HOH HOH . K 7 HOH A 55 555 753 HOH HOH . K 7 HOH A 56 556 733 HOH HOH . K 7 HOH A 57 557 731 HOH HOH . K 7 HOH A 58 558 800 HOH HOH . K 7 HOH A 59 559 806 HOH HOH . K 7 HOH A 60 560 951 HOH HOH . K 7 HOH A 61 561 827 HOH HOH . K 7 HOH A 62 562 763 HOH HOH . K 7 HOH A 63 563 948 HOH HOH . K 7 HOH A 64 564 767 HOH HOH . K 7 HOH A 65 565 866 HOH HOH . K 7 HOH A 66 566 828 HOH HOH . K 7 HOH A 67 567 882 HOH HOH . K 7 HOH A 68 568 724 HOH HOH . K 7 HOH A 69 569 820 HOH HOH . K 7 HOH A 70 570 830 HOH HOH . K 7 HOH A 71 571 734 HOH HOH . K 7 HOH A 72 572 877 HOH HOH . K 7 HOH A 73 573 791 HOH HOH . K 7 HOH A 74 574 761 HOH HOH . K 7 HOH A 75 575 747 HOH HOH . K 7 HOH A 76 576 814 HOH HOH . K 7 HOH A 77 577 745 HOH HOH . K 7 HOH A 78 578 920 HOH HOH . K 7 HOH A 79 579 712 HOH HOH . K 7 HOH A 80 580 759 HOH HOH . K 7 HOH A 81 581 743 HOH HOH . K 7 HOH A 82 582 808 HOH HOH . K 7 HOH A 83 583 807 HOH HOH . K 7 HOH A 84 584 867 HOH HOH . K 7 HOH A 85 585 723 HOH HOH . K 7 HOH A 86 586 742 HOH HOH . K 7 HOH A 87 587 790 HOH HOH . K 7 HOH A 88 588 777 HOH HOH . K 7 HOH A 89 589 738 HOH HOH . K 7 HOH A 90 590 833 HOH HOH . K 7 HOH A 91 591 817 HOH HOH . K 7 HOH A 92 592 943 HOH HOH . K 7 HOH A 93 593 803 HOH HOH . K 7 HOH A 94 594 831 HOH HOH . K 7 HOH A 95 595 788 HOH HOH . K 7 HOH A 96 596 770 HOH HOH . K 7 HOH A 97 597 908 HOH HOH . K 7 HOH A 98 598 805 HOH HOH . K 7 HOH A 99 599 798 HOH HOH . K 7 HOH A 100 600 736 HOH HOH . K 7 HOH A 101 601 797 HOH HOH . K 7 HOH A 102 602 780 HOH HOH . K 7 HOH A 103 603 792 HOH HOH . K 7 HOH A 104 604 886 HOH HOH . K 7 HOH A 105 605 859 HOH HOH . K 7 HOH A 106 606 922 HOH HOH . K 7 HOH A 107 607 795 HOH HOH . K 7 HOH A 108 608 762 HOH HOH . K 7 HOH A 109 609 821 HOH HOH . K 7 HOH A 110 610 941 HOH HOH . K 7 HOH A 111 611 868 HOH HOH . K 7 HOH A 112 612 720 HOH HOH . K 7 HOH A 113 613 779 HOH HOH . K 7 HOH A 114 614 758 HOH HOH . K 7 HOH A 115 615 766 HOH HOH . K 7 HOH A 116 616 757 HOH HOH . K 7 HOH A 117 617 865 HOH HOH . K 7 HOH A 118 618 894 HOH HOH . K 7 HOH A 119 619 843 HOH HOH . K 7 HOH A 120 620 924 HOH HOH . K 7 HOH A 121 621 884 HOH HOH . K 7 HOH A 122 622 883 HOH HOH . K 7 HOH A 123 623 835 HOH HOH . K 7 HOH A 124 624 903 HOH HOH . K 7 HOH A 125 625 774 HOH HOH . K 7 HOH A 126 626 748 HOH HOH . K 7 HOH A 127 627 854 HOH HOH . K 7 HOH A 128 628 902 HOH HOH . K 7 HOH A 129 629 755 HOH HOH . K 7 HOH A 130 630 853 HOH HOH . K 7 HOH A 131 631 864 HOH HOH . K 7 HOH A 132 632 857 HOH HOH . K 7 HOH A 133 634 927 HOH HOH . K 7 HOH A 134 635 735 HOH HOH . K 7 HOH A 135 636 750 HOH HOH . K 7 HOH A 136 637 708 HOH HOH . K 7 HOH A 137 638 716 HOH HOH . K 7 HOH A 138 639 705 HOH HOH . K 7 HOH A 139 640 809 HOH HOH . K 7 HOH A 140 641 876 HOH HOH . K 7 HOH A 141 642 931 HOH HOH . K 7 HOH A 142 643 781 HOH HOH . K 7 HOH A 143 644 834 HOH HOH . K 7 HOH A 144 645 901 HOH HOH . K 7 HOH A 145 646 811 HOH HOH . K 7 HOH A 146 647 729 HOH HOH . K 7 HOH A 147 648 873 HOH HOH . K 7 HOH A 148 649 756 HOH HOH . K 7 HOH A 149 650 727 HOH HOH . K 7 HOH A 150 651 818 HOH HOH . K 7 HOH A 151 652 900 HOH HOH . K 7 HOH A 152 653 918 HOH HOH . K 7 HOH A 153 654 839 HOH HOH . K 7 HOH A 154 655 849 HOH HOH . K 7 HOH A 155 656 739 HOH HOH . K 7 HOH A 156 657 785 HOH HOH . K 7 HOH A 157 658 740 HOH HOH . K 7 HOH A 158 659 721 HOH HOH . K 7 HOH A 159 660 888 HOH HOH . K 7 HOH A 160 661 929 HOH HOH . K 7 HOH A 161 662 746 HOH HOH . K 7 HOH A 162 663 914 HOH HOH . K 7 HOH A 163 664 775 HOH HOH . K 7 HOH A 164 665 703 HOH HOH . K 7 HOH A 165 666 737 HOH HOH . K 7 HOH A 166 667 787 HOH HOH . K 7 HOH A 167 668 751 HOH HOH . K 7 HOH A 168 669 910 HOH HOH . K 7 HOH A 169 670 701 HOH HOH . K 7 HOH A 170 671 794 HOH HOH . K 7 HOH A 171 672 912 HOH HOH . K 7 HOH A 172 673 799 HOH HOH . K 7 HOH A 173 674 702 HOH HOH . K 7 HOH A 174 675 782 HOH HOH . K 7 HOH A 175 676 915 HOH HOH . K 7 HOH A 176 677 954 HOH HOH . K 7 HOH A 177 678 801 HOH HOH . K 7 HOH A 178 679 826 HOH HOH . K 7 HOH A 179 680 945 HOH HOH . K 7 HOH A 180 681 907 HOH HOH . K 7 HOH A 181 682 824 HOH HOH . K 7 HOH A 182 683 813 HOH HOH . K 7 HOH A 183 684 891 HOH HOH . K 7 HOH A 184 685 896 HOH HOH . K 7 HOH A 185 686 812 HOH HOH . K 7 HOH A 186 687 862 HOH HOH . K 7 HOH A 187 688 897 HOH HOH . K 7 HOH A 188 689 784 HOH HOH . K 7 HOH A 189 690 890 HOH HOH . K 7 HOH A 190 691 956 HOH HOH . K 7 HOH A 191 692 947 HOH HOH . K 7 HOH A 192 693 802 HOH HOH . K 7 HOH A 193 694 898 HOH HOH . K 7 HOH A 194 695 913 HOH HOH . K 7 HOH A 195 696 899 HOH HOH . K 7 HOH A 196 697 822 HOH HOH . K 7 HOH A 197 698 892 HOH HOH . K 7 HOH A 198 699 930 HOH HOH . K 7 HOH A 199 700 851 HOH HOH . K 7 HOH A 200 701 887 HOH HOH . K 7 HOH A 201 702 844 HOH HOH . K 7 HOH A 202 703 837 HOH HOH . K 7 HOH A 203 704 845 HOH HOH . K 7 HOH A 204 705 870 HOH HOH . K 7 HOH A 205 706 893 HOH HOH . K 7 HOH A 206 707 925 HOH HOH . K 7 HOH A 207 708 928 HOH HOH . K 7 HOH A 208 709 952 HOH HOH . K 7 HOH A 209 710 869 HOH HOH . K 7 HOH A 210 711 921 HOH HOH . K 7 HOH A 211 712 786 HOH HOH . K 7 HOH A 212 713 846 HOH HOH . K 7 HOH A 213 714 944 HOH HOH . K 7 HOH A 214 715 950 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAD 9BU . . . J 6 -6.967 32.518 1.188 1 39.22 ? CAD 9BU 409 A 1 HETATM 2 C CBB 9BU . . . J 6 -6.734 32.11 -0.273 1 40.12 ? CBB 9BU 409 A 1 HETATM 3 C CAE 9BU . . . J 6 -5.754 33.061 -0.971 1 36.7 ? CAE 9BU 409 A 1 HETATM 4 C CAU 9BU . . . J 6 -8.061 32.049 -1.058 1 40.96 ? CAU 9BU 409 A 1 HETATM 5 O OAG 9BU . . . J 6 -9.106 32.507 -0.588 1 45.29 ? OAG 9BU 409 A 1 HETATM 6 O OAR 9BU . . . J 6 -8.054 31.446 -2.281 1 42.26 ? OAR 9BU 409 A 1 HETATM 7 C CAN 9BU . . . J 6 -9.212 31.675 -3.142 1 39.6 ? CAN 9BU 409 A 1 HETATM 8 C CAL 9BU . . . J 6 -9.105 32.613 -4.171 1 37.63 ? CAL 9BU 409 A 1 HETATM 9 C CAS 9BU . . . J 6 -9.865 33.787 -4.271 1 36.34 ? CAS 9BU 409 A 1 HETATM 10 C CAA 9BU . . . J 6 -10.996 34.189 -3.295 1 35.89 ? CAA 9BU 409 A 1 HETATM 11 C CAO 9BU . . . J 6 -9.603 34.678 -5.472 1 32.83 ? CAO 9BU 409 A 1 HETATM 12 C CAP 9BU . . . J 6 -8.686 35.84 -5.119 1 28.07 ? CAP 9BU 409 A 1 HETATM 13 C CAT 9BU . . . J 6 -7.197 35.482 -5.252 1 25.52 ? CAT 9BU 409 A 1 HETATM 14 C CAB 9BU . . . J 6 -6.634 34.966 -6.586 1 25.9 ? CAB 9BU 409 A 1 HETATM 15 C CAM 9BU . . . J 6 -6.362 35.726 -4.164 1 23.09 ? CAM 9BU 409 A 1 HETATM 16 C CAQ 9BU . . . J 6 -4.973 35.512 -4.09 1 21 ? CAQ 9BU 409 A 1 HETATM 17 C CBA 9BU . . . J 6 -4.231 36.746 -3.527 1 19.91 ? CBA 9BU 409 A 1 HETATM 18 C CAX 9BU . . . J 6 -4.336 37.084 -2.177 1 19.56 ? CAX 9BU 409 A 1 HETATM 19 O OAI 9BU . . . J 6 -5.101 36.299 -1.363 1 20.94 ? OAI 9BU 409 A 1 HETATM 20 C CAZ 9BU . . . J 6 -3.672 38.203 -1.642 1 19.76 ? CAZ 9BU 409 A 1 HETATM 21 C CAK 9BU . . . J 6 -3.803 38.491 -0.155 1 19.46 ? CAK 9BU 409 A 1 HETATM 22 O OAF 9BU . . . J 6 -4.406 37.684 0.543 1 20.8 ? OAF 9BU 409 A 1 HETATM 23 C CAV 9BU . . . J 6 -2.867 39.004 -2.457 1 19.32 ? CAV 9BU 409 A 1 HETATM 24 C CAC 9BU . . . J 6 -2.118 40.232 -1.904 1 20.54 ? CAC 9BU 409 A 1 HETATM 25 C CAY 9BU . . . J 6 -2.76 38.684 -3.802 1 20.23 ? CAY 9BU 409 A 1 HETATM 26 CL CLA 9BU . . . J 6 -1.758 39.659 -4.826 1 22.31 ? CLA 9BU 409 A 1 HETATM 27 C CAW 9BU . . . J 6 -3.438 37.581 -4.334 1 20.52 ? CAW 9BU 409 A 1 HETATM 28 O OAH 9BU . . . J 6 -3.294 37.315 -5.658 1 20.54 ? OAH 9BU 409 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #