data_5ZFB
#
_model_server_result.job_id            bUhaxt6FnUbMGmcf8d_YVg 
_model_server_result.datetime_utc      '2024-11-27 01:06:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5zfb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    5ZFB 
#
_exptl.entry_id    5ZFB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5ZFB 
_cell.length_a            90.323 
_cell.length_b            90.323 
_cell.length_c            123.71 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ZFB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 134 n n 
N1 C10 FMN doub 135 n n 
C2 O2 FMN doub 136 n n 
C2 N3 FMN sing 137 n n 
N3 C4 FMN sing 138 n n 
N3 HN3 FMN sing 139 n n 
C4 O4 FMN doub 140 n n 
C4 C4A FMN sing 141 n n 
C4A N5 FMN doub 142 n n 
C4A C10 FMN sing 143 n n 
N5 C5A FMN sing 144 n n 
C5A C6 FMN doub 145 n y 
C5A C9A FMN sing 146 n y 
C6 C7 FMN sing 147 n y 
C6 H6 FMN sing 148 n n 
C7 C7M FMN sing 149 n n 
C7 C8 FMN doub 150 n y 
C7M HM71 FMN sing 151 n n 
C7M HM72 FMN sing 152 n n 
C7M HM73 FMN sing 153 n n 
C8 C8M FMN sing 154 n n 
C8 C9 FMN sing 155 n y 
C8M HM81 FMN sing 156 n n 
C8M HM82 FMN sing 157 n n 
C8M HM83 FMN sing 158 n n 
C9 C9A FMN doub 159 n y 
C9 H9 FMN sing 160 n n 
C9A N10 FMN sing 161 n n 
N10 C10 FMN sing 162 n n 
N10 C1' FMN sing 163 n n 
C1' C2' FMN sing 164 n n 
C1' "H1'1" FMN sing 165 n n 
C1' "H1'2" FMN sing 166 n n 
C2' O2' FMN sing 167 n n 
C2' C3' FMN sing 168 n n 
C2' H2' FMN sing 169 n n 
O2' HO2' FMN sing 170 n n 
C3' O3' FMN sing 171 n n 
C3' C4' FMN sing 172 n n 
C3' H3' FMN sing 173 n n 
O3' HO3' FMN sing 174 n n 
C4' O4' FMN sing 175 n n 
C4' C5' FMN sing 176 n n 
C4' H4' FMN sing 177 n n 
O4' HO4' FMN sing 178 n n 
C5' O5' FMN sing 179 n n 
C5' "H5'1" FMN sing 180 n n 
C5' "H5'2" FMN sing 181 n n 
O5' P FMN sing 182 n n 
P O1P FMN doub 183 n n 
P O2P FMN sing 184 n n 
P O3P FMN sing 185 n n 
O2P HOP2 FMN sing 186 n n 
O3P HOP3 FMN sing 187 n n 
#
_atom_sites.entry_id                     5ZFB 
_atom_sites.fract_transf_matrix[1][1]    0.011071 
_atom_sites.fract_transf_matrix[1][2]    0.006392 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012784 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008083 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FMN A 1 401 398 FMN FMN . 
C 3 ORO A 1 402 399 ORO ORO . 
D 4 ACT A 1 403 401 ACT ACT . 
E 5 SO4 A 1 404 402 SO4 SO4 . 
F 5 SO4 A 1 405 403 SO4 SO4 . 
G 5 SO4 A 1 406 404 SO4 SO4 . 
H 5 SO4 A 1 407 406 SO4 SO4 . 
I 5 SO4 A 1 408 407 SO4 SO4 . 
J 6 9BX A 1 409 501 9BX DRG . 
K 5 SO4 A 1 410 1 SO4 SO4 . 
L 7 HOH A 1 501 783 HOH HOH . 
L 7 HOH A 2 502 948 HOH HOH . 
L 7 HOH A 3 503 776 HOH HOH . 
L 7 HOH A 4 504 836 HOH HOH . 
L 7 HOH A 5 505 704 HOH HOH . 
L 7 HOH A 6 506 732 HOH HOH . 
L 7 HOH A 7 507 773 HOH HOH . 
L 7 HOH A 8 508 861 HOH HOH . 
L 7 HOH A 9 509 706 HOH HOH . 
L 7 HOH A 10 510 754 HOH HOH . 
L 7 HOH A 11 511 963 HOH HOH . 
L 7 HOH A 12 512 710 HOH HOH . 
L 7 HOH A 13 513 714 HOH HOH . 
L 7 HOH A 14 514 749 HOH HOH . 
L 7 HOH A 15 515 958 HOH HOH . 
L 7 HOH A 16 516 838 HOH HOH . 
L 7 HOH A 17 517 819 HOH HOH . 
L 7 HOH A 18 518 722 HOH HOH . 
L 7 HOH A 19 519 718 HOH HOH . 
L 7 HOH A 20 520 724 HOH HOH . 
L 7 HOH A 21 521 829 HOH HOH . 
L 7 HOH A 22 522 711 HOH HOH . 
L 7 HOH A 23 523 840 HOH HOH . 
L 7 HOH A 24 524 803 HOH HOH . 
L 7 HOH A 25 525 796 HOH HOH . 
L 7 HOH A 26 526 752 HOH HOH . 
L 7 HOH A 27 527 742 HOH HOH . 
L 7 HOH A 28 528 791 HOH HOH . 
L 7 HOH A 29 529 768 HOH HOH . 
L 7 HOH A 30 530 841 HOH HOH . 
L 7 HOH A 31 531 709 HOH HOH . 
L 7 HOH A 32 532 719 HOH HOH . 
L 7 HOH A 33 533 736 HOH HOH . 
L 7 HOH A 34 534 733 HOH HOH . 
L 7 HOH A 35 535 725 HOH HOH . 
L 7 HOH A 36 536 781 HOH HOH . 
L 7 HOH A 37 537 810 HOH HOH . 
L 7 HOH A 38 538 885 HOH HOH . 
L 7 HOH A 39 539 763 HOH HOH . 
L 7 HOH A 40 540 905 HOH HOH . 
L 7 HOH A 41 541 744 HOH HOH . 
L 7 HOH A 42 542 764 HOH HOH . 
L 7 HOH A 43 543 932 HOH HOH . 
L 7 HOH A 44 544 832 HOH HOH . 
L 7 HOH A 45 545 769 HOH HOH . 
L 7 HOH A 46 546 866 HOH HOH . 
L 7 HOH A 47 547 753 HOH HOH . 
L 7 HOH A 48 548 772 HOH HOH . 
L 7 HOH A 49 549 827 HOH HOH . 
L 7 HOH A 50 550 757 HOH HOH . 
L 7 HOH A 51 551 743 HOH HOH . 
L 7 HOH A 52 552 729 HOH HOH . 
L 7 HOH A 53 553 858 HOH HOH . 
L 7 HOH A 54 554 908 HOH HOH . 
L 7 HOH A 55 555 730 HOH HOH . 
L 7 HOH A 56 556 713 HOH HOH . 
L 7 HOH A 57 557 831 HOH HOH . 
L 7 HOH A 58 558 946 HOH HOH . 
L 7 HOH A 59 559 780 HOH HOH . 
L 7 HOH A 60 560 731 HOH HOH . 
L 7 HOH A 61 561 767 HOH HOH . 
L 7 HOH A 62 562 741 HOH HOH . 
L 7 HOH A 63 563 728 HOH HOH . 
L 7 HOH A 64 564 738 HOH HOH . 
L 7 HOH A 65 565 951 HOH HOH . 
L 7 HOH A 66 566 715 HOH HOH . 
L 7 HOH A 67 567 734 HOH HOH . 
L 7 HOH A 68 568 820 HOH HOH . 
L 7 HOH A 69 569 707 HOH HOH . 
L 7 HOH A 70 570 712 HOH HOH . 
L 7 HOH A 71 571 777 HOH HOH . 
L 7 HOH A 72 572 745 HOH HOH . 
L 7 HOH A 73 573 771 HOH HOH . 
L 7 HOH A 74 574 750 HOH HOH . 
L 7 HOH A 75 575 705 HOH HOH . 
L 7 HOH A 76 576 877 HOH HOH . 
L 7 HOH A 77 577 957 HOH HOH . 
L 7 HOH A 78 578 814 HOH HOH . 
L 7 HOH A 79 579 849 HOH HOH . 
L 7 HOH A 80 580 808 HOH HOH . 
L 7 HOH A 81 581 931 HOH HOH . 
L 7 HOH A 82 582 942 HOH HOH . 
L 7 HOH A 83 583 723 HOH HOH . 
L 7 HOH A 84 584 823 HOH HOH . 
L 7 HOH A 85 585 804 HOH HOH . 
L 7 HOH A 86 586 756 HOH HOH . 
L 7 HOH A 87 587 717 HOH HOH . 
L 7 HOH A 88 588 779 HOH HOH . 
L 7 HOH A 89 589 790 HOH HOH . 
L 7 HOH A 90 590 915 HOH HOH . 
L 7 HOH A 91 591 765 HOH HOH . 
L 7 HOH A 92 592 795 HOH HOH . 
L 7 HOH A 93 593 758 HOH HOH . 
L 7 HOH A 94 594 761 HOH HOH . 
L 7 HOH A 95 595 720 HOH HOH . 
L 7 HOH A 96 596 891 HOH HOH . 
L 7 HOH A 97 597 817 HOH HOH . 
L 7 HOH A 98 598 868 HOH HOH . 
L 7 HOH A 99 599 864 HOH HOH . 
L 7 HOH A 100 600 821 HOH HOH . 
L 7 HOH A 101 601 900 HOH HOH . 
L 7 HOH A 102 602 813 HOH HOH . 
L 7 HOH A 103 603 735 HOH HOH . 
L 7 HOH A 104 604 959 HOH HOH . 
L 7 HOH A 105 605 807 HOH HOH . 
L 7 HOH A 106 606 854 HOH HOH . 
L 7 HOH A 107 607 882 HOH HOH . 
L 7 HOH A 108 608 857 HOH HOH . 
L 7 HOH A 109 609 884 HOH HOH . 
L 7 HOH A 110 610 708 HOH HOH . 
L 7 HOH A 111 611 748 HOH HOH . 
L 7 HOH A 112 612 739 HOH HOH . 
L 7 HOH A 113 613 799 HOH HOH . 
L 7 HOH A 114 614 853 HOH HOH . 
L 7 HOH A 115 615 933 HOH HOH . 
L 7 HOH A 116 616 806 HOH HOH . 
L 7 HOH A 117 617 924 HOH HOH . 
L 7 HOH A 118 618 785 HOH HOH . 
L 7 HOH A 119 619 876 HOH HOH . 
L 7 HOH A 120 620 843 HOH HOH . 
L 7 HOH A 121 621 809 HOH HOH . 
L 7 HOH A 122 622 737 HOH HOH . 
L 7 HOH A 123 623 793 HOH HOH . 
L 7 HOH A 124 624 824 HOH HOH . 
L 7 HOH A 125 625 760 HOH HOH . 
L 7 HOH A 126 626 805 HOH HOH . 
L 7 HOH A 127 627 755 HOH HOH . 
L 7 HOH A 128 628 716 HOH HOH . 
L 7 HOH A 129 629 792 HOH HOH . 
L 7 HOH A 130 630 956 HOH HOH . 
L 7 HOH A 131 631 811 HOH HOH . 
L 7 HOH A 132 632 794 HOH HOH . 
L 7 HOH A 133 633 929 HOH HOH . 
L 7 HOH A 134 634 798 HOH HOH . 
L 7 HOH A 135 635 883 HOH HOH . 
L 7 HOH A 136 636 818 HOH HOH . 
L 7 HOH A 137 637 774 HOH HOH . 
L 7 HOH A 138 638 740 HOH HOH . 
L 7 HOH A 139 639 746 HOH HOH . 
L 7 HOH A 140 640 751 HOH HOH . 
L 7 HOH A 141 641 703 HOH HOH . 
L 7 HOH A 142 642 775 HOH HOH . 
L 7 HOH A 143 643 833 HOH HOH . 
L 7 HOH A 144 644 812 HOH HOH . 
L 7 HOH A 145 645 897 HOH HOH . 
L 7 HOH A 146 646 787 HOH HOH . 
L 7 HOH A 147 647 955 HOH HOH . 
L 7 HOH A 148 648 962 HOH HOH . 
L 7 HOH A 149 649 881 HOH HOH . 
L 7 HOH A 150 650 797 HOH HOH . 
L 7 HOH A 151 651 727 HOH HOH . 
L 7 HOH A 152 652 945 HOH HOH . 
L 7 HOH A 153 653 907 HOH HOH . 
L 7 HOH A 154 654 941 HOH HOH . 
L 7 HOH A 155 655 815 HOH HOH . 
L 7 HOH A 156 656 851 HOH HOH . 
L 7 HOH A 157 657 952 HOH HOH . 
L 7 HOH A 158 658 702 HOH HOH . 
L 7 HOH A 159 659 778 HOH HOH . 
L 7 HOH A 160 660 910 HOH HOH . 
L 7 HOH A 161 661 901 HOH HOH . 
L 7 HOH A 162 662 834 HOH HOH . 
L 7 HOH A 163 663 949 HOH HOH . 
L 7 HOH A 164 664 954 HOH HOH . 
L 7 HOH A 165 665 802 HOH HOH . 
L 7 HOH A 166 666 890 HOH HOH . 
L 7 HOH A 167 667 898 HOH HOH . 
L 7 HOH A 168 668 899 HOH HOH . 
L 7 HOH A 169 669 892 HOH HOH . 
L 7 HOH A 170 670 950 HOH HOH . 
L 7 HOH A 171 671 826 HOH HOH . 
L 7 HOH A 172 672 930 HOH HOH . 
L 7 HOH A 173 673 964 HOH HOH . 
L 7 HOH A 174 674 943 HOH HOH . 
L 7 HOH A 175 675 896 HOH HOH . 
L 7 HOH A 176 676 925 HOH HOH . 
L 7 HOH A 177 677 947 HOH HOH . 
L 7 HOH A 178 678 893 HOH HOH . 
L 7 HOH A 179 679 921 HOH HOH . 
L 7 HOH A 180 680 846 HOH HOH . 
L 7 HOH A 181 681 928 HOH HOH . 
L 7 HOH A 182 682 786 HOH HOH . 
L 7 HOH A 183 683 953 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . B 2 38.434 -18.054 11.799 1 10.62 ? N1 FMN 401 A 1 
HETATM 2 C C2 FMN . . . B 2 38.792 -18.782 10.704 1 11.61 ? C2 FMN 401 A 1 
HETATM 3 O O2 FMN . . . B 2 39.006 -18.173 9.63 1 11.95 ? O2 FMN 401 A 1 
HETATM 4 N N3 FMN . . . B 2 38.946 -20.127 10.736 1 11.18 ? N3 FMN 401 A 1 
HETATM 5 C C4 FMN . . . B 2 38.742 -20.877 11.846 1 11.48 ? C4 FMN 401 A 1 
HETATM 6 O O4 FMN . . . B 2 38.903 -22.153 11.874 1 10.91 ? O4 FMN 401 A 1 
HETATM 7 C C4A FMN . . . B 2 38.349 -20.172 13.07 1 10.68 ? C4A FMN 401 A 1 
HETATM 8 N N5 FMN . . . B 2 38.145 -20.845 14.242 1 10.58 ? N5 FMN 401 A 1 
HETATM 9 C C5A FMN . . . B 2 37.743 -20.205 15.377 1 10.8 ? C5A FMN 401 A 1 
HETATM 10 C C6 FMN . . . B 2 37.487 -20.898 16.565 1 10.95 ? C6 FMN 401 A 1 
HETATM 11 C C7 FMN . . . B 2 37.068 -20.202 17.7 1 11.25 ? C7 FMN 401 A 1 
HETATM 12 C C7M FMN . . . B 2 36.784 -20.928 19.011 1 11.5 ? C7M FMN 401 A 1 
HETATM 13 C C8 FMN . . . B 2 36.866 -18.732 17.633 1 11.03 ? C8 FMN 401 A 1 
HETATM 14 C C8M FMN . . . B 2 36.397 -17.933 18.82 1 11.03 ? C8M FMN 401 A 1 
HETATM 15 C C9 FMN . . . B 2 37.119 -18.066 16.463 1 10.8 ? C9 FMN 401 A 1 
HETATM 16 C C9A FMN . . . B 2 37.532 -18.732 15.324 1 10.75 ? C9A FMN 401 A 1 
HETATM 17 N N10 FMN . . . B 2 37.779 -18.007 14.114 1 10.55 ? N10 FMN 401 A 1 
HETATM 18 C C10 FMN . . . B 2 38.207 -18.69 12.973 1 10.55 ? C10 FMN 401 A 1 
HETATM 19 C C1' FMN . . . B 2 37.629 -16.558 14.067 1 9.4 ? C1' FMN 401 A 1 
HETATM 20 C C2' FMN . . . B 2 36.205 -16.116 13.816 1 9.15 ? C2' FMN 401 A 1 
HETATM 21 O O2' FMN . . . B 2 35.856 -16.626 12.525 1 9.24 ? O2' FMN 401 A 1 
HETATM 22 C C3' FMN . . . B 2 36.153 -14.575 13.837 1 9.49 ? C3' FMN 401 A 1 
HETATM 23 O O3' FMN . . . B 2 37.06 -14.098 12.796 1 9.59 ? O3' FMN 401 A 1 
HETATM 24 C C4' FMN . . . B 2 36.641 -14.008 15.202 1 9.18 ? C4' FMN 401 A 1 
HETATM 25 O O4' FMN . . . B 2 36.329 -14.891 16.308 1 8.67 ? O4' FMN 401 A 1 
HETATM 26 C C5' FMN . . . B 2 36.053 -12.626 15.492 1 9.19 ? C5' FMN 401 A 1 
HETATM 27 O O5' FMN . . . B 2 34.634 -12.703 15.586 1 9.8 ? O5' FMN 401 A 1 
HETATM 28 P P FMN . . . B 2 33.802 -12.811 16.972 1 10.62 ? P FMN 401 A 1 
HETATM 29 O O1P FMN . . . B 2 34.018 -14.221 17.453 1 10.93 ? O1P FMN 401 A 1 
HETATM 30 O O2P FMN . . . B 2 32.395 -12.502 16.567 1 9.99 ? O2P FMN 401 A 1 
HETATM 31 O O3P FMN . . . B 2 34.392 -11.749 17.883 1 10.31 ? O3P FMN 401 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           31 
#