data_5ZFT
#
_model_server_result.job_id            gY3ThlUd9XFFMShbZD6_9g 
_model_server_result.datetime_utc      '2024-11-22 09:34:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5zft 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    5ZFT 
#
_exptl.entry_id    5ZFT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              340.418 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '5-METHYL-2-[2-OXO-1-(2-THIOPHEN-2-YL-ACETYLAMINO)-ETHYL]-3,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         77.63 
_cell.angle_beta          75.51 
_cell.angle_gamma         69.27 
_cell.entry_id            5ZFT 
_cell.length_a            43.24 
_cell.length_b            45.88 
_cell.length_c            66.09 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ZFT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C14 H16 N2 O4 S2' 
_chem_comp.formula_weight    340.418 
_chem_comp.id                CED 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '5-METHYL-2-[2-OXO-1-(2-THIOPHEN-2-YL-ACETYLAMINO)-ETHYL]-3,6-DIHYDRO-2H-[1,3]THIAZINE-4-CARBOXYLIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'DEGRADED CEPHALORIDINE, open form' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S1 C2 CED sing 70 n n 
S1 C6 CED sing 71 n n 
C2 C3 CED sing 72 n n 
C2 H21 CED sing 73 n n 
C2 H22 CED sing 74 n n 
C3 C3' CED sing 75 n n 
C3 C4 CED doub 76 n n 
C3' "H3'1" CED sing 77 n n 
C3' "H3'2" CED sing 78 n n 
C3' "H3'3" CED sing 79 n n 
C4 C4' CED sing 80 n n 
C4 N5 CED sing 81 n n 
C4' O4A CED doub 82 n n 
C4' O4B CED sing 83 n n 
O4B HO4 CED sing 84 n n 
N5 C6 CED sing 85 n n 
N5 HN5 CED sing 86 n n 
C6 C7 CED sing 87 n n 
C6 H6 CED sing 88 n n 
C7 C8 CED sing 89 n n 
C7 N10 CED sing 90 n n 
C7 H7 CED sing 91 n n 
C8 O9 CED doub 92 n n 
C8 H8 CED sing 93 n n 
N10 C11 CED sing 94 n n 
N10 HN1 CED sing 95 n n 
C11 O12 CED doub 96 n n 
C11 C13 CED sing 97 n n 
C13 C14 CED sing 98 n n 
C13 H131 CED sing 99 n n 
C13 H132 CED sing 100 n n 
C14 C15 CED doub 101 n y 
C14 S19 CED sing 102 n y 
C15 C16 CED sing 103 n y 
C15 H15 CED sing 104 n n 
C16 C17 CED doub 105 n y 
C16 H16 CED sing 106 n n 
C17 S19 CED sing 107 n y 
C17 H17 CED sing 108 n n 
#
_atom_sites.entry_id                     5ZFT 
_atom_sites.fract_transf_matrix[1][1]    0.023127 
_atom_sites.fract_transf_matrix[1][2]    -0.008753 
_atom_sites.fract_transf_matrix[1][3]    -0.004809 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023305 
_atom_sites.fract_transf_matrix[2][3]    -0.003266 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015781 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CED A 1 301 1 CED CED . 
D 2 CED B 1 301 1 CED CED . 
E 3 HOH A 1 401 130 HOH HOH . 
E 3 HOH A 2 402 5 HOH HOH . 
E 3 HOH A 3 403 100 HOH HOH . 
E 3 HOH A 4 404 26 HOH HOH . 
E 3 HOH A 5 405 10 HOH HOH . 
E 3 HOH A 6 406 15 HOH HOH . 
E 3 HOH A 7 407 21 HOH HOH . 
E 3 HOH A 8 408 12 HOH HOH . 
E 3 HOH A 9 409 123 HOH HOH . 
E 3 HOH A 10 410 92 HOH HOH . 
E 3 HOH A 11 411 99 HOH HOH . 
E 3 HOH A 12 412 27 HOH HOH . 
E 3 HOH A 13 413 42 HOH HOH . 
E 3 HOH A 14 414 77 HOH HOH . 
E 3 HOH A 15 415 80 HOH HOH . 
E 3 HOH A 16 416 25 HOH HOH . 
E 3 HOH A 17 417 67 HOH HOH . 
E 3 HOH A 18 418 101 HOH HOH . 
E 3 HOH A 19 419 110 HOH HOH . 
E 3 HOH A 20 420 51 HOH HOH . 
E 3 HOH A 21 421 81 HOH HOH . 
E 3 HOH A 22 422 16 HOH HOH . 
E 3 HOH A 23 423 54 HOH HOH . 
E 3 HOH A 24 424 45 HOH HOH . 
E 3 HOH A 25 425 58 HOH HOH . 
E 3 HOH A 26 426 98 HOH HOH . 
E 3 HOH A 27 427 1 HOH HOH . 
E 3 HOH A 28 428 93 HOH HOH . 
E 3 HOH A 29 429 68 HOH HOH . 
E 3 HOH A 30 430 19 HOH HOH . 
E 3 HOH A 31 431 53 HOH HOH . 
E 3 HOH A 32 432 83 HOH HOH . 
E 3 HOH A 33 433 20 HOH HOH . 
E 3 HOH A 34 434 57 HOH HOH . 
E 3 HOH A 35 435 82 HOH HOH . 
E 3 HOH A 36 436 63 HOH HOH . 
E 3 HOH A 37 437 2 HOH HOH . 
E 3 HOH A 38 438 86 HOH HOH . 
E 3 HOH A 39 439 97 HOH HOH . 
E 3 HOH A 40 440 28 HOH HOH . 
E 3 HOH A 41 441 22 HOH HOH . 
E 3 HOH A 42 442 74 HOH HOH . 
E 3 HOH A 43 443 23 HOH HOH . 
E 3 HOH A 44 444 126 HOH HOH . 
E 3 HOH A 45 445 34 HOH HOH . 
E 3 HOH A 46 446 70 HOH HOH . 
E 3 HOH A 47 447 78 HOH HOH . 
E 3 HOH A 48 448 118 HOH HOH . 
E 3 HOH A 49 449 50 HOH HOH . 
E 3 HOH A 50 450 104 HOH HOH . 
E 3 HOH A 51 451 48 HOH HOH . 
E 3 HOH A 52 452 62 HOH HOH . 
E 3 HOH A 53 453 55 HOH HOH . 
E 3 HOH A 54 454 43 HOH HOH . 
E 3 HOH A 55 455 79 HOH HOH . 
E 3 HOH A 56 456 132 HOH HOH . 
E 3 HOH A 57 457 17 HOH HOH . 
E 3 HOH A 58 458 127 HOH HOH . 
E 3 HOH A 59 459 71 HOH HOH . 
E 3 HOH A 60 460 102 HOH HOH . 
E 3 HOH A 61 461 120 HOH HOH . 
F 3 HOH B 1 401 131 HOH HOH . 
F 3 HOH B 2 402 41 HOH HOH . 
F 3 HOH B 3 403 44 HOH HOH . 
F 3 HOH B 4 404 109 HOH HOH . 
F 3 HOH B 5 405 106 HOH HOH . 
F 3 HOH B 6 406 24 HOH HOH . 
F 3 HOH B 7 407 122 HOH HOH . 
F 3 HOH B 8 408 69 HOH HOH . 
F 3 HOH B 9 409 14 HOH HOH . 
F 3 HOH B 10 410 32 HOH HOH . 
F 3 HOH B 11 411 115 HOH HOH . 
F 3 HOH B 12 412 38 HOH HOH . 
F 3 HOH B 13 413 4 HOH HOH . 
F 3 HOH B 14 414 73 HOH HOH . 
F 3 HOH B 15 415 39 HOH HOH . 
F 3 HOH B 16 416 90 HOH HOH . 
F 3 HOH B 17 417 95 HOH HOH . 
F 3 HOH B 18 418 7 HOH HOH . 
F 3 HOH B 19 419 46 HOH HOH . 
F 3 HOH B 20 420 114 HOH HOH . 
F 3 HOH B 21 421 103 HOH HOH . 
F 3 HOH B 22 422 111 HOH HOH . 
F 3 HOH B 23 423 119 HOH HOH . 
F 3 HOH B 24 424 121 HOH HOH . 
F 3 HOH B 25 425 124 HOH HOH . 
F 3 HOH B 26 426 52 HOH HOH . 
F 3 HOH B 27 427 64 HOH HOH . 
F 3 HOH B 28 428 8 HOH HOH . 
F 3 HOH B 29 429 91 HOH HOH . 
F 3 HOH B 30 430 37 HOH HOH . 
F 3 HOH B 31 431 125 HOH HOH . 
F 3 HOH B 32 432 33 HOH HOH . 
F 3 HOH B 33 433 105 HOH HOH . 
F 3 HOH B 34 434 31 HOH HOH . 
F 3 HOH B 35 435 85 HOH HOH . 
F 3 HOH B 36 436 87 HOH HOH . 
F 3 HOH B 37 437 18 HOH HOH . 
F 3 HOH B 38 438 65 HOH HOH . 
F 3 HOH B 39 439 75 HOH HOH . 
F 3 HOH B 40 440 47 HOH HOH . 
F 3 HOH B 41 441 13 HOH HOH . 
F 3 HOH B 42 442 84 HOH HOH . 
F 3 HOH B 43 443 117 HOH HOH . 
F 3 HOH B 44 444 40 HOH HOH . 
F 3 HOH B 45 445 72 HOH HOH . 
F 3 HOH B 46 446 29 HOH HOH . 
F 3 HOH B 47 447 36 HOH HOH . 
F 3 HOH B 48 448 11 HOH HOH . 
F 3 HOH B 49 449 96 HOH HOH . 
F 3 HOH B 50 450 30 HOH HOH . 
F 3 HOH B 51 451 59 HOH HOH . 
F 3 HOH B 52 452 94 HOH HOH . 
F 3 HOH B 53 453 88 HOH HOH . 
F 3 HOH B 54 454 35 HOH HOH . 
F 3 HOH B 55 455 60 HOH HOH . 
F 3 HOH B 56 456 61 HOH HOH . 
F 3 HOH B 57 457 89 HOH HOH . 
F 3 HOH B 58 458 66 HOH HOH . 
F 3 HOH B 59 459 9 HOH HOH . 
F 3 HOH B 60 460 3 HOH HOH . 
F 3 HOH B 61 461 108 HOH HOH . 
F 3 HOH B 62 462 6 HOH HOH . 
F 3 HOH B 63 463 76 HOH HOH . 
F 3 HOH B 64 464 113 HOH HOH . 
F 3 HOH B 65 465 128 HOH HOH . 
F 3 HOH B 66 466 133 HOH HOH . 
F 3 HOH B 67 467 116 HOH HOH . 
F 3 HOH B 68 468 56 HOH HOH . 
F 3 HOH B 69 469 107 HOH HOH . 
F 3 HOH B 70 470 112 HOH HOH . 
F 3 HOH B 71 471 129 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 CED . . . D 2 12.126 40.347 37.9 1 33.07 ? S1 CED 301 B 1 
HETATM 2 C C2 CED . . . D 2 13.66 39.411 38.138 1 32.7 ? C2 CED 301 B 1 
HETATM 3 C C3 CED . . . D 2 13.47 37.96 38.488 1 33.37 ? C3 CED 301 B 1 
HETATM 4 C C3' CED . . . D 2 14.727 37.158 38.282 1 34.82 ? C3' CED 301 B 1 
HETATM 5 C C4 CED . . . D 2 12.312 37.414 38.95 1 33.15 ? C4 CED 301 B 1 
HETATM 6 C C4' CED . . . D 2 12.14 35.929 39.281 1 30.22 ? C4' CED 301 B 1 
HETATM 7 O O4A CED . . . D 2 11.018 35.501 39.302 1 31.48 ? O4A CED 301 B 1 
HETATM 8 O O4B CED . . . D 2 13.126 35.303 39.49 1 30.61 ? O4B CED 301 B 1 
HETATM 9 N N5 CED . . . D 2 11.159 38.162 39.204 1 27.68 ? N5 CED 301 B 1 
HETATM 10 C C6 CED . . . D 2 11.051 39.622 39.176 1 31.39 ? C6 CED 301 B 1 
HETATM 11 C C7 CED . . . D 2 11.363 40.107 40.584 1 31.24 ? C7 CED 301 B 1 
HETATM 12 C C8 CED . . . D 2 11.526 38.846 41.443 1 30.21 ? C8 CED 301 B 1 
HETATM 13 O O9 CED . . . D 2 11.094 38.824 42.522 1 30.82 ? O9 CED 301 B 1 
HETATM 14 N N10 CED . . . D 2 12.579 40.875 40.77 1 30.15 ? N10 CED 301 B 1 
HETATM 15 C C11 CED . . . D 2 12.631 42.2 40.698 1 32.89 ? C11 CED 301 B 1 
HETATM 16 O O12 CED . . . D 2 11.741 42.88 40.204 1 26.51 ? O12 CED 301 B 1 
HETATM 17 C C13 CED . . . D 2 13.873 42.837 41.267 1 36.87 ? C13 CED 301 B 1 
HETATM 18 C C14 CED . . . D 2 15.055 42.497 40.419 1 43.19 ? C14 CED 301 B 1 
HETATM 19 C C15 CED . . . D 2 15.19 42.651 39.029 1 44.28 ? C15 CED 301 B 1 
HETATM 20 C C16 CED . . . D 2 16.448 42.136 38.618 1 47.73 ? C16 CED 301 B 1 
HETATM 21 C C17 CED . . . D 2 17.206 41.662 39.646 1 46.1 ? C17 CED 301 B 1 
HETATM 22 S S19 CED . . . D 2 16.439 41.817 41.158 1 51.3 ? S19 CED 301 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           22 
#