data_5ZHW
#
_model_server_result.job_id            Vswb_OPUuR6FEhgZ7DkSIQ 
_model_server_result.datetime_utc      '2024-11-05 07:47:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5zhw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":304}' 
#
_entry.id    5ZHW 
#
_exptl.entry_id    5ZHW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          108.62 
_cell.angle_gamma         90 
_cell.entry_id            5ZHW 
_cell.length_a            85.861 
_cell.length_b            40.578 
_cell.length_c            115.449 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ZHW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,M 1 1 
B,H,I,J,K,L,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ILE 106 A ILE 154 1_555 A N MSE 107 A MSE 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale2 A C MSE 107 A MSE 155 1_555 A N ASP 108 A ASP 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale3 D N DAL . A DAL 302 1_555 E C DAL . A DAL 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.368 ? 
covale ? covale4 B C ILE 106 B ILE 154 1_555 B N MSE 107 B MSE 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? 
covale ? covale5 B C MSE 107 B MSE 155 1_555 B N ASP 108 B ASP 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? 
covale ? covale6 I N DAL . B DAL 302 1_555 J C DAL . B DAL 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.361 ? 
metalc ? metalc1 A NE2 HIS 140 A HIS 188 1_555 C CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc2 A OD1 ASP 147 A ASP 195 1_555 C CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? 
metalc ? metalc3 A ND1 HIS 193 A HIS 241 1_555 C CU CU . A CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? 
metalc ? metalc4 C CU CU . A CU 301 1_555 E O DAL . A DAL 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? 
metalc ? metalc5 B NE2 HIS 140 B HIS 188 1_555 H CU CU . B CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc6 B OD1 ASP 147 B ASP 195 1_555 H CU CU . B CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? 
metalc ? metalc7 B ND1 HIS 193 B HIS 241 1_555 H CU CU . B CU 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? 
metalc ? metalc8 H CU CU . B CU 301 1_555 J O DAL . B DAL 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 141 n n 
C1 C2 GOL sing 142 n n 
C1 H11 GOL sing 143 n n 
C1 H12 GOL sing 144 n n 
O1 HO1 GOL sing 145 n n 
C2 O2 GOL sing 146 n n 
C2 C3 GOL sing 147 n n 
C2 H2 GOL sing 148 n n 
O2 HO2 GOL sing 149 n n 
C3 O3 GOL sing 150 n n 
C3 H31 GOL sing 151 n n 
C3 H32 GOL sing 152 n n 
O3 HO3 GOL sing 153 n n 
#
_atom_sites.entry_id                     5ZHW 
_atom_sites.fract_transf_matrix[1][1]    0.011647 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003925 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024644 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00914 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CU A 1 301 1 CU CU . 
D 3 DAL A 1 302 1 DAL DAL . 
E 3 DAL A 1 303 2 DAL DAL . 
F 4 GOL A 1 304 11 GOL GOL . 
G 5 PG4 A 1 305 553 PG4 PG4 . 
H 2 CU B 1 301 2 CU CU . 
I 3 DAL B 1 302 3 DAL DAL . 
J 3 DAL B 1 303 4 DAL DAL . 
K 4 GOL B 1 304 9 GOL GOL . 
L 5 PG4 B 1 305 552 PG4 PG4 . 
M 6 HOH A 1 401 3 HOH HOH . 
M 6 HOH A 2 402 124 HOH HOH . 
M 6 HOH A 3 403 76 HOH HOH . 
M 6 HOH A 4 404 65 HOH HOH . 
M 6 HOH A 5 405 56 HOH HOH . 
M 6 HOH A 6 406 74 HOH HOH . 
M 6 HOH A 7 407 130 HOH HOH . 
M 6 HOH A 8 408 31 HOH HOH . 
M 6 HOH A 9 409 27 HOH HOH . 
M 6 HOH A 10 410 61 HOH HOH . 
M 6 HOH A 11 411 106 HOH HOH . 
M 6 HOH A 12 412 13 HOH HOH . 
M 6 HOH A 13 413 24 HOH HOH . 
M 6 HOH A 14 414 32 HOH HOH . 
M 6 HOH A 15 415 6 HOH HOH . 
M 6 HOH A 16 416 42 HOH HOH . 
M 6 HOH A 17 417 45 HOH HOH . 
M 6 HOH A 18 418 7 HOH HOH . 
M 6 HOH A 19 419 18 HOH HOH . 
M 6 HOH A 20 420 103 HOH HOH . 
M 6 HOH A 21 421 91 HOH HOH . 
M 6 HOH A 22 422 115 HOH HOH . 
M 6 HOH A 23 423 118 HOH HOH . 
M 6 HOH A 24 424 71 HOH HOH . 
M 6 HOH A 25 425 120 HOH HOH . 
M 6 HOH A 26 426 28 HOH HOH . 
M 6 HOH A 27 427 108 HOH HOH . 
M 6 HOH A 28 428 53 HOH HOH . 
M 6 HOH A 29 429 104 HOH HOH . 
M 6 HOH A 30 430 110 HOH HOH . 
M 6 HOH A 31 431 132 HOH HOH . 
M 6 HOH A 32 432 150 HOH HOH . 
M 6 HOH A 33 433 114 HOH HOH . 
M 6 HOH A 34 434 82 HOH HOH . 
M 6 HOH A 35 435 111 HOH HOH . 
M 6 HOH A 36 436 16 HOH HOH . 
M 6 HOH A 37 437 80 HOH HOH . 
M 6 HOH A 38 438 12 HOH HOH . 
M 6 HOH A 39 439 133 HOH HOH . 
M 6 HOH A 40 440 117 HOH HOH . 
M 6 HOH A 41 441 156 HOH HOH . 
M 6 HOH A 42 442 143 HOH HOH . 
M 6 HOH A 43 443 116 HOH HOH . 
M 6 HOH A 44 444 14 HOH HOH . 
M 6 HOH A 45 445 86 HOH HOH . 
M 6 HOH A 46 446 107 HOH HOH . 
M 6 HOH A 47 447 37 HOH HOH . 
M 6 HOH A 48 448 151 HOH HOH . 
M 6 HOH A 49 449 5 HOH HOH . 
M 6 HOH A 50 450 89 HOH HOH . 
M 6 HOH A 51 451 72 HOH HOH . 
M 6 HOH A 52 452 44 HOH HOH . 
M 6 HOH A 53 453 2 HOH HOH . 
M 6 HOH A 54 454 97 HOH HOH . 
M 6 HOH A 55 455 4 HOH HOH . 
M 6 HOH A 56 456 113 HOH HOH . 
M 6 HOH A 57 457 137 HOH HOH . 
M 6 HOH A 58 458 75 HOH HOH . 
M 6 HOH A 59 459 49 HOH HOH . 
M 6 HOH A 60 460 100 HOH HOH . 
M 6 HOH A 61 461 88 HOH HOH . 
M 6 HOH A 62 462 140 HOH HOH . 
N 6 HOH B 1 401 90 HOH HOH . 
N 6 HOH B 2 402 34 HOH HOH . 
N 6 HOH B 3 403 141 HOH HOH . 
N 6 HOH B 4 404 138 HOH HOH . 
N 6 HOH B 5 405 66 HOH HOH . 
N 6 HOH B 6 406 62 HOH HOH . 
N 6 HOH B 7 407 51 HOH HOH . 
N 6 HOH B 8 408 122 HOH HOH . 
N 6 HOH B 9 409 127 HOH HOH . 
N 6 HOH B 10 410 145 HOH HOH . 
N 6 HOH B 11 411 63 HOH HOH . 
N 6 HOH B 12 412 77 HOH HOH . 
N 6 HOH B 13 413 33 HOH HOH . 
N 6 HOH B 14 414 17 HOH HOH . 
N 6 HOH B 15 415 10 HOH HOH . 
N 6 HOH B 16 416 69 HOH HOH . 
N 6 HOH B 17 417 30 HOH HOH . 
N 6 HOH B 18 418 58 HOH HOH . 
N 6 HOH B 19 419 60 HOH HOH . 
N 6 HOH B 20 420 46 HOH HOH . 
N 6 HOH B 21 421 121 HOH HOH . 
N 6 HOH B 22 422 73 HOH HOH . 
N 6 HOH B 23 423 29 HOH HOH . 
N 6 HOH B 24 424 59 HOH HOH . 
N 6 HOH B 25 425 152 HOH HOH . 
N 6 HOH B 26 426 129 HOH HOH . 
N 6 HOH B 27 427 47 HOH HOH . 
N 6 HOH B 28 428 48 HOH HOH . 
N 6 HOH B 29 429 83 HOH HOH . 
N 6 HOH B 30 430 43 HOH HOH . 
N 6 HOH B 31 431 79 HOH HOH . 
N 6 HOH B 32 432 55 HOH HOH . 
N 6 HOH B 33 433 68 HOH HOH . 
N 6 HOH B 34 434 84 HOH HOH . 
N 6 HOH B 35 435 57 HOH HOH . 
N 6 HOH B 36 436 92 HOH HOH . 
N 6 HOH B 37 437 40 HOH HOH . 
N 6 HOH B 38 438 9 HOH HOH . 
N 6 HOH B 39 439 81 HOH HOH . 
N 6 HOH B 40 440 135 HOH HOH . 
N 6 HOH B 41 441 95 HOH HOH . 
N 6 HOH B 42 442 144 HOH HOH . 
N 6 HOH B 43 443 70 HOH HOH . 
N 6 HOH B 44 444 123 HOH HOH . 
N 6 HOH B 45 445 158 HOH HOH . 
N 6 HOH B 46 446 102 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 4 -19.531 -11.247 37.88 1 53.52 ? C1 GOL 304 A 1 
HETATM 2 O O1 GOL . . . F 4 -18.389 -12.052 38.211 1 57.79 ? O1 GOL 304 A 1 
HETATM 3 C C2 GOL . . . F 4 -19.504 -10.721 36.433 1 51.23 ? C2 GOL 304 A 1 
HETATM 4 O O2 GOL . . . F 4 -19.294 -9.306 36.338 1 40.3 ? O2 GOL 304 A 1 
HETATM 5 C C3 GOL . . . F 4 -18.458 -11.395 35.542 1 48.03 ? C3 GOL 304 A 1 
HETATM 6 O O3 GOL . . . F 4 -19.158 -12.239 34.65 1 44.2 ? O3 GOL 304 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#