data_5ZIE
#
_model_server_result.job_id            PWaTDSCQxLhvxNxtgPDLiA 
_model_server_result.datetime_utc      '2024-11-25 16:12:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5zie 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":911}' 
#
_entry.id    5ZIE 
#
_exptl.entry_id    5ZIE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              133.103 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ASPARTIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.52 
_cell.angle_gamma         90 
_cell.entry_id            5ZIE 
_cell.length_a            70.953 
_cell.length_b            102.511 
_cell.length_c            111.241 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ZIE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 734 A CYS 713 1_555 A SG CYS 738 A CYS 717 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
disulf ? disulf2 B SG CYS 734 B CYS 713 1_555 B SG CYS 738 B CYS 717 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? 
#
_chem_comp.formula           'C4 H7 N O4' 
_chem_comp.formula_weight    133.103 
_chem_comp.id                ASP 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              'ASPARTIC ACID' 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA ASP sing 55 n n 
N H ASP sing 56 n n 
N H2 ASP sing 57 n n 
CA C ASP sing 58 n n 
CA CB ASP sing 59 n n 
CA HA ASP sing 60 n n 
C O ASP doub 61 n n 
C OXT ASP sing 62 n n 
CB CG ASP sing 63 n n 
CB HB2 ASP sing 64 n n 
CB HB3 ASP sing 65 n n 
CG OD1 ASP doub 66 n n 
CG OD2 ASP sing 67 n n 
OD2 HD2 ASP sing 68 n n 
OXT HXT ASP sing 69 n n 
#
_atom_sites.entry_id                     5ZIE 
_atom_sites.fract_transf_matrix[1][1]    0.014094 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000127 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009755 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00899 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ASP A 1 911 911 ASP ASP . 
D 2 ASP B 1 911 911 ASP ASP . 
E 3 HOH A 1 1001 1001 HOH HOH . 
E 3 HOH A 2 1002 1002 HOH HOH . 
E 3 HOH A 3 1003 1003 HOH HOH . 
E 3 HOH A 4 1004 1004 HOH HOH . 
E 3 HOH A 5 1005 1005 HOH HOH . 
E 3 HOH A 6 1006 1006 HOH HOH . 
E 3 HOH A 7 1007 1007 HOH HOH . 
E 3 HOH A 8 1008 1008 HOH HOH . 
E 3 HOH A 9 1009 1009 HOH HOH . 
E 3 HOH A 10 1010 1010 HOH HOH . 
E 3 HOH A 11 1011 1011 HOH HOH . 
E 3 HOH A 12 1012 1012 HOH HOH . 
E 3 HOH A 13 1013 1013 HOH HOH . 
E 3 HOH A 14 1014 1014 HOH HOH . 
E 3 HOH A 15 1015 1015 HOH HOH . 
E 3 HOH A 16 1016 1016 HOH HOH . 
E 3 HOH A 17 1017 1017 HOH HOH . 
E 3 HOH A 18 1018 1018 HOH HOH . 
E 3 HOH A 19 1019 1019 HOH HOH . 
E 3 HOH A 20 1020 1020 HOH HOH . 
E 3 HOH A 21 1021 1021 HOH HOH . 
E 3 HOH A 22 1022 1022 HOH HOH . 
E 3 HOH A 23 1023 1023 HOH HOH . 
E 3 HOH A 24 1024 1024 HOH HOH . 
E 3 HOH A 25 1025 1025 HOH HOH . 
E 3 HOH A 26 1026 1026 HOH HOH . 
E 3 HOH A 27 1027 1027 HOH HOH . 
E 3 HOH A 28 1028 1028 HOH HOH . 
E 3 HOH A 29 1029 1029 HOH HOH . 
E 3 HOH A 30 1030 1030 HOH HOH . 
E 3 HOH A 31 1031 1031 HOH HOH . 
E 3 HOH A 32 1032 1032 HOH HOH . 
E 3 HOH A 33 1033 1033 HOH HOH . 
E 3 HOH A 34 1034 1034 HOH HOH . 
E 3 HOH A 35 1035 1035 HOH HOH . 
E 3 HOH A 36 1036 1036 HOH HOH . 
E 3 HOH A 37 1037 1037 HOH HOH . 
E 3 HOH A 38 1038 1038 HOH HOH . 
E 3 HOH A 39 1039 1039 HOH HOH . 
E 3 HOH A 40 1040 1040 HOH HOH . 
E 3 HOH A 41 1041 1041 HOH HOH . 
E 3 HOH A 42 1042 1042 HOH HOH . 
E 3 HOH A 43 1043 1043 HOH HOH . 
E 3 HOH A 44 1044 1044 HOH HOH . 
E 3 HOH A 45 1045 1045 HOH HOH . 
E 3 HOH A 46 1046 1046 HOH HOH . 
E 3 HOH A 47 1047 1047 HOH HOH . 
E 3 HOH A 48 1048 1048 HOH HOH . 
E 3 HOH A 49 1049 1049 HOH HOH . 
E 3 HOH A 50 1050 1050 HOH HOH . 
E 3 HOH A 51 1051 1051 HOH HOH . 
E 3 HOH A 52 1052 1052 HOH HOH . 
E 3 HOH A 53 1053 1053 HOH HOH . 
E 3 HOH A 54 1054 1054 HOH HOH . 
E 3 HOH A 55 1055 1055 HOH HOH . 
E 3 HOH A 56 1056 1056 HOH HOH . 
E 3 HOH A 57 1057 1057 HOH HOH . 
E 3 HOH A 58 1058 1058 HOH HOH . 
E 3 HOH A 59 1059 1059 HOH HOH . 
E 3 HOH A 60 1060 1060 HOH HOH . 
E 3 HOH A 61 1061 1061 HOH HOH . 
E 3 HOH A 62 1062 1062 HOH HOH . 
E 3 HOH A 63 1063 1063 HOH HOH . 
E 3 HOH A 64 1064 1064 HOH HOH . 
E 3 HOH A 65 1065 1065 HOH HOH . 
E 3 HOH A 66 1066 1066 HOH HOH . 
E 3 HOH A 67 1067 1067 HOH HOH . 
E 3 HOH A 68 1068 1068 HOH HOH . 
E 3 HOH A 69 1069 1069 HOH HOH . 
E 3 HOH A 70 1070 1070 HOH HOH . 
E 3 HOH A 71 1071 1071 HOH HOH . 
E 3 HOH A 72 1072 1072 HOH HOH . 
E 3 HOH A 73 1073 1073 HOH HOH . 
E 3 HOH A 74 1074 1074 HOH HOH . 
E 3 HOH A 75 1075 1075 HOH HOH . 
E 3 HOH A 76 1076 1076 HOH HOH . 
E 3 HOH A 77 1077 1077 HOH HOH . 
E 3 HOH A 78 1078 1078 HOH HOH . 
E 3 HOH A 79 1079 1079 HOH HOH . 
E 3 HOH A 80 1080 1080 HOH HOH . 
E 3 HOH A 81 1081 1081 HOH HOH . 
E 3 HOH A 82 1082 1082 HOH HOH . 
E 3 HOH A 83 1083 1083 HOH HOH . 
E 3 HOH A 84 1084 1084 HOH HOH . 
E 3 HOH A 85 1085 1085 HOH HOH . 
E 3 HOH A 86 1086 1086 HOH HOH . 
E 3 HOH A 87 1087 1087 HOH HOH . 
E 3 HOH A 88 1088 1088 HOH HOH . 
E 3 HOH A 89 1089 1089 HOH HOH . 
E 3 HOH A 90 1090 1090 HOH HOH . 
E 3 HOH A 91 1091 1091 HOH HOH . 
E 3 HOH A 92 1092 1092 HOH HOH . 
E 3 HOH A 93 1093 1093 HOH HOH . 
E 3 HOH A 94 1094 1094 HOH HOH . 
E 3 HOH A 95 1095 1095 HOH HOH . 
E 3 HOH A 96 1096 1096 HOH HOH . 
E 3 HOH A 97 1097 1097 HOH HOH . 
E 3 HOH A 98 1098 1098 HOH HOH . 
E 3 HOH A 99 1099 1099 HOH HOH . 
E 3 HOH A 100 1100 1100 HOH HOH . 
E 3 HOH A 101 1101 1101 HOH HOH . 
E 3 HOH A 102 1102 1102 HOH HOH . 
E 3 HOH A 103 1103 1103 HOH HOH . 
F 3 HOH B 1 1001 1001 HOH HOH . 
F 3 HOH B 2 1002 1002 HOH HOH . 
F 3 HOH B 3 1003 1003 HOH HOH . 
F 3 HOH B 4 1004 1004 HOH HOH . 
F 3 HOH B 5 1005 1005 HOH HOH . 
F 3 HOH B 6 1006 1006 HOH HOH . 
F 3 HOH B 7 1007 1007 HOH HOH . 
F 3 HOH B 8 1008 1008 HOH HOH . 
F 3 HOH B 9 1009 1009 HOH HOH . 
F 3 HOH B 10 1010 1010 HOH HOH . 
F 3 HOH B 11 1011 1011 HOH HOH . 
F 3 HOH B 12 1012 1012 HOH HOH . 
F 3 HOH B 13 1013 1013 HOH HOH . 
F 3 HOH B 14 1014 1014 HOH HOH . 
F 3 HOH B 15 1015 1015 HOH HOH . 
F 3 HOH B 16 1016 1016 HOH HOH . 
F 3 HOH B 17 1017 1017 HOH HOH . 
F 3 HOH B 18 1018 1018 HOH HOH . 
F 3 HOH B 19 1019 1019 HOH HOH . 
F 3 HOH B 20 1020 1020 HOH HOH . 
F 3 HOH B 21 1021 1021 HOH HOH . 
F 3 HOH B 22 1022 1022 HOH HOH . 
F 3 HOH B 23 1023 1023 HOH HOH . 
F 3 HOH B 24 1024 1024 HOH HOH . 
F 3 HOH B 25 1025 1025 HOH HOH . 
F 3 HOH B 26 1026 1026 HOH HOH . 
F 3 HOH B 27 1027 1027 HOH HOH . 
F 3 HOH B 28 1028 1028 HOH HOH . 
F 3 HOH B 29 1029 1029 HOH HOH . 
F 3 HOH B 30 1030 1030 HOH HOH . 
F 3 HOH B 31 1031 1031 HOH HOH . 
F 3 HOH B 32 1032 1032 HOH HOH . 
F 3 HOH B 33 1033 1033 HOH HOH . 
F 3 HOH B 34 1034 1034 HOH HOH . 
F 3 HOH B 35 1035 1035 HOH HOH . 
F 3 HOH B 36 1036 1036 HOH HOH . 
F 3 HOH B 37 1037 1037 HOH HOH . 
F 3 HOH B 38 1038 1038 HOH HOH . 
F 3 HOH B 39 1039 1039 HOH HOH . 
F 3 HOH B 40 1040 1040 HOH HOH . 
F 3 HOH B 41 1041 1041 HOH HOH . 
F 3 HOH B 42 1042 1042 HOH HOH . 
F 3 HOH B 43 1043 1043 HOH HOH . 
F 3 HOH B 44 1044 1044 HOH HOH . 
F 3 HOH B 45 1045 1045 HOH HOH . 
F 3 HOH B 46 1046 1046 HOH HOH . 
F 3 HOH B 47 1047 1047 HOH HOH . 
F 3 HOH B 48 1048 1048 HOH HOH . 
F 3 HOH B 49 1049 1049 HOH HOH . 
F 3 HOH B 50 1050 1050 HOH HOH . 
F 3 HOH B 51 1051 1051 HOH HOH . 
F 3 HOH B 52 1052 1052 HOH HOH . 
F 3 HOH B 53 1053 1053 HOH HOH . 
F 3 HOH B 54 1054 1054 HOH HOH . 
F 3 HOH B 55 1055 1055 HOH HOH . 
F 3 HOH B 56 1056 1056 HOH HOH . 
F 3 HOH B 57 1057 1057 HOH HOH . 
F 3 HOH B 58 1058 1058 HOH HOH . 
F 3 HOH B 59 1059 1059 HOH HOH . 
F 3 HOH B 60 1060 1060 HOH HOH . 
F 3 HOH B 61 1061 1061 HOH HOH . 
F 3 HOH B 62 1062 1062 HOH HOH . 
F 3 HOH B 63 1063 1063 HOH HOH . 
F 3 HOH B 64 1064 1064 HOH HOH . 
F 3 HOH B 65 1065 1065 HOH HOH . 
F 3 HOH B 66 1066 1066 HOH HOH . 
F 3 HOH B 67 1067 1067 HOH HOH . 
F 3 HOH B 68 1068 1068 HOH HOH . 
F 3 HOH B 69 1069 1069 HOH HOH . 
F 3 HOH B 70 1070 1070 HOH HOH . 
F 3 HOH B 71 1071 1071 HOH HOH . 
F 3 HOH B 72 1072 1072 HOH HOH . 
F 3 HOH B 73 1073 1073 HOH HOH . 
F 3 HOH B 74 1074 1074 HOH HOH . 
F 3 HOH B 75 1075 1075 HOH HOH . 
F 3 HOH B 76 1076 1076 HOH HOH . 
F 3 HOH B 77 1077 1077 HOH HOH . 
F 3 HOH B 78 1078 1078 HOH HOH . 
F 3 HOH B 79 1079 1079 HOH HOH . 
F 3 HOH B 80 1080 1080 HOH HOH . 
F 3 HOH B 81 1081 1081 HOH HOH . 
F 3 HOH B 82 1082 1082 HOH HOH . 
F 3 HOH B 83 1083 1083 HOH HOH . 
F 3 HOH B 84 1084 1084 HOH HOH . 
F 3 HOH B 85 1085 1085 HOH HOH . 
F 3 HOH B 86 1086 1086 HOH HOH . 
F 3 HOH B 87 1087 1087 HOH HOH . 
F 3 HOH B 88 1088 1088 HOH HOH . 
F 3 HOH B 89 1089 1089 HOH HOH . 
F 3 HOH B 90 1090 1090 HOH HOH . 
F 3 HOH B 91 1091 1091 HOH HOH . 
F 3 HOH B 92 1092 1092 HOH HOH . 
F 3 HOH B 93 1093 1093 HOH HOH . 
F 3 HOH B 94 1094 1094 HOH HOH . 
F 3 HOH B 95 1095 1095 HOH HOH . 
F 3 HOH B 96 1096 1096 HOH HOH . 
F 3 HOH B 97 1097 1097 HOH HOH . 
F 3 HOH B 98 1098 1098 HOH HOH . 
F 3 HOH B 99 1099 1099 HOH HOH . 
F 3 HOH B 100 1100 1100 HOH HOH . 
F 3 HOH B 101 1101 1101 HOH HOH . 
F 3 HOH B 102 1102 1102 HOH HOH . 
F 3 HOH B 103 1103 1103 HOH HOH . 
F 3 HOH B 104 1104 1104 HOH HOH . 
F 3 HOH B 105 1105 1105 HOH HOH . 
F 3 HOH B 106 1106 1106 HOH HOH . 
F 3 HOH B 107 1107 1107 HOH HOH . 
F 3 HOH B 108 1108 1108 HOH HOH . 
F 3 HOH B 109 1109 1109 HOH HOH . 
F 3 HOH B 110 1110 1110 HOH HOH . 
F 3 HOH B 111 1111 1111 HOH HOH . 
F 3 HOH B 112 1112 1112 HOH HOH . 
F 3 HOH B 113 1113 1113 HOH HOH . 
F 3 HOH B 114 1114 1114 HOH HOH . 
F 3 HOH B 115 1115 1115 HOH HOH . 
F 3 HOH B 116 1116 1116 HOH HOH . 
F 3 HOH B 117 1117 1117 HOH HOH . 
F 3 HOH B 118 1118 1118 HOH HOH . 
F 3 HOH B 119 1119 1119 HOH HOH . 
F 3 HOH B 120 1120 1120 HOH HOH . 
F 3 HOH B 121 1121 1121 HOH HOH . 
F 3 HOH B 122 1122 1122 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N ASP . . . C 2 13.196 -0.043 6.62 1 38.3 ? N ASP 911 A 1 
HETATM 2 C CA ASP . . . C 2 12.3 1.106 6.846 1 44.79 ? CA ASP 911 A 1 
HETATM 3 C C ASP . . . C 2 11.433 1.006 8.136 1 49.77 ? C ASP 911 A 1 
HETATM 4 O O ASP . . . C 2 10.236 1.242 8.16 1 48.01 ? O ASP 911 A 1 
HETATM 5 C CB ASP . . . C 2 11.484 1.379 5.599 1 37.98 ? CB ASP 911 A 1 
HETATM 6 C CG ASP . . . C 2 12.284 2.206 4.549 1 46.14 ? CG ASP 911 A 1 
HETATM 7 O OD1 ASP . . . C 2 12.192 1.948 3.371 1 50.44 ? OD1 ASP 911 A 1 
HETATM 8 O OD2 ASP . . . C 2 13.038 3.131 4.895 1 52.82 ? OD2 ASP 911 A 1 
HETATM 9 O OXT ASP . . . C 2 11.947 0.729 9.226 1 50.4 ? OXT ASP 911 A 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           9 
#