data_5ZIY # _model_server_result.job_id hVJtBSI2Rlc0ofhMfVsztQ _model_server_result.datetime_utc '2024-10-19 10:25:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5ziy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 5ZIY # _exptl.entry_id 5ZIY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.8 _cell.angle_gamma 90 _cell.entry_id 5ZIY _cell.length_a 138.619 _cell.length_b 57.986 _cell.length_c 67.914 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZIY _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,J 1 1 B,I,K 2 1 A,B,C,D,E,F,G,H,I,J,K 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 16 A HIS 54 1_555 F ZN ZN . A ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc2 A OE1 GLU 91 A GLU 129 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.62 ? metalc ? metalc3 A OE2 GLU 91 A GLU 129 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc4 A OE1 GLU 103 A GLU 141 1_555 G ZN ZN . A ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc5 A OE2 GLU 103 A GLU 141 1_555 G ZN ZN . A ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? metalc ? metalc6 A OD1 ASP 110 A ASP 148 1_555 H ZN ZN . A ZN 306 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.577 ? metalc ? metalc7 A OD2 ASP 110 A ASP 148 1_555 H ZN ZN . A ZN 306 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc8 A OE2 GLU 129 A GLU 167 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc9 A OE2 GLU 191 A GLU 229 1_555 E ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc10 C ZN ZN . A ZN 301 1_555 J O HOH . A HOH 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc11 C ZN ZN . A ZN 301 1_555 B OE1 GLU 103 B GLU 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.693 ? metalc ? metalc12 C ZN ZN . A ZN 301 1_555 B OE2 GLU 103 B GLU 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc13 D ZN ZN . A ZN 302 1_555 J O HOH . A HOH 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc14 D ZN ZN . A ZN 302 1_555 B OD1 ASP 30 B ASP 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc15 E ZN ZN . A ZN 303 1_555 J O HOH . A HOH 417 4_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc16 E ZN ZN . A ZN 303 1_555 J O HOH . A HOH 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc17 G ZN ZN . A ZN 305 1_555 B OE2 GLU 129 B GLU 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc18 B OE2 GLU 91 B GLU 129 1_555 I ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5ZIY _atom_sites.fract_transf_matrix[1][1] 0.007214 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003333 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017246 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01622 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 301 1 ZN ZN . D 2 ZN A 1 302 2 ZN ZN . E 2 ZN A 1 303 4 ZN ZN . F 2 ZN A 1 304 5 ZN ZN . G 2 ZN A 1 305 6 ZN ZN . H 2 ZN A 1 306 7 ZN ZN . I 2 ZN B 1 301 3 ZN ZN . J 3 HOH A 1 401 137 HOH HOH . J 3 HOH A 2 402 93 HOH HOH . J 3 HOH A 3 403 100 HOH HOH . J 3 HOH A 4 404 32 HOH HOH . J 3 HOH A 5 405 44 HOH HOH . J 3 HOH A 6 406 51 HOH HOH . J 3 HOH A 7 407 64 HOH HOH . J 3 HOH A 8 408 97 HOH HOH . J 3 HOH A 9 409 119 HOH HOH . J 3 HOH A 10 410 96 HOH HOH . J 3 HOH A 11 411 54 HOH HOH . J 3 HOH A 12 412 109 HOH HOH . J 3 HOH A 13 413 65 HOH HOH . J 3 HOH A 14 414 91 HOH HOH . J 3 HOH A 15 415 56 HOH HOH . J 3 HOH A 16 416 28 HOH HOH . J 3 HOH A 17 417 129 HOH HOH . J 3 HOH A 18 418 18 HOH HOH . J 3 HOH A 19 419 35 HOH HOH . J 3 HOH A 20 420 31 HOH HOH . J 3 HOH A 21 421 27 HOH HOH . J 3 HOH A 22 422 12 HOH HOH . J 3 HOH A 23 423 88 HOH HOH . J 3 HOH A 24 424 98 HOH HOH . J 3 HOH A 25 425 13 HOH HOH . J 3 HOH A 26 426 49 HOH HOH . J 3 HOH A 27 427 106 HOH HOH . J 3 HOH A 28 428 123 HOH HOH . J 3 HOH A 29 429 67 HOH HOH . J 3 HOH A 30 430 90 HOH HOH . J 3 HOH A 31 431 113 HOH HOH . J 3 HOH A 32 432 52 HOH HOH . J 3 HOH A 33 433 76 HOH HOH . J 3 HOH A 34 434 84 HOH HOH . J 3 HOH A 35 435 39 HOH HOH . J 3 HOH A 36 436 69 HOH HOH . J 3 HOH A 37 437 25 HOH HOH . J 3 HOH A 38 438 33 HOH HOH . J 3 HOH A 39 439 78 HOH HOH . J 3 HOH A 40 440 24 HOH HOH . J 3 HOH A 41 441 17 HOH HOH . J 3 HOH A 42 442 34 HOH HOH . J 3 HOH A 43 443 138 HOH HOH . J 3 HOH A 44 444 30 HOH HOH . J 3 HOH A 45 445 136 HOH HOH . J 3 HOH A 46 446 89 HOH HOH . J 3 HOH A 47 447 128 HOH HOH . J 3 HOH A 48 448 59 HOH HOH . J 3 HOH A 49 449 112 HOH HOH . K 3 HOH B 1 401 37 HOH HOH . K 3 HOH B 2 402 58 HOH HOH . K 3 HOH B 3 403 60 HOH HOH . K 3 HOH B 4 404 68 HOH HOH . K 3 HOH B 5 405 117 HOH HOH . K 3 HOH B 6 406 22 HOH HOH . K 3 HOH B 7 407 15 HOH HOH . K 3 HOH B 8 408 23 HOH HOH . K 3 HOH B 9 409 77 HOH HOH . K 3 HOH B 10 410 20 HOH HOH . K 3 HOH B 11 411 41 HOH HOH . K 3 HOH B 12 412 116 HOH HOH . K 3 HOH B 13 413 19 HOH HOH . K 3 HOH B 14 414 92 HOH HOH . K 3 HOH B 15 415 115 HOH HOH . K 3 HOH B 16 416 45 HOH HOH . K 3 HOH B 17 417 108 HOH HOH . K 3 HOH B 18 418 57 HOH HOH . K 3 HOH B 19 419 40 HOH HOH . K 3 HOH B 20 420 79 HOH HOH . K 3 HOH B 21 421 4 HOH HOH . K 3 HOH B 22 422 16 HOH HOH . K 3 HOH B 23 423 103 HOH HOH . K 3 HOH B 24 424 5 HOH HOH . K 3 HOH B 25 425 72 HOH HOH . K 3 HOH B 26 426 81 HOH HOH . K 3 HOH B 27 427 94 HOH HOH . K 3 HOH B 28 428 29 HOH HOH . K 3 HOH B 29 429 48 HOH HOH . K 3 HOH B 30 430 71 HOH HOH . K 3 HOH B 31 431 47 HOH HOH . K 3 HOH B 32 432 114 HOH HOH . K 3 HOH B 33 433 9 HOH HOH . K 3 HOH B 34 434 73 HOH HOH . K 3 HOH B 35 435 80 HOH HOH . K 3 HOH B 36 436 82 HOH HOH . K 3 HOH B 37 437 8 HOH HOH . K 3 HOH B 38 438 111 HOH HOH . K 3 HOH B 39 439 85 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 18.465 _atom_site.Cartn_y -13.133 _atom_site.Cartn_z -4.396 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #