data_5ZMM # _model_server_result.job_id DniSiiTx9Xk2bKJVRJiCag _model_server_result.datetime_utc '2024-10-19 16:48:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zmm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":603}' # _entry.id 5ZMM # _exptl.entry_id 5ZMM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ZMM _cell.length_a 130.183 _cell.length_b 139.367 _cell.length_c 281.005 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZMM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 K N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 Q N N ? 3 R N N ? 3 T N N ? 3 V N N ? 3 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 490 A CYS 489 1_555 G ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc2 A SG CYS 528 A CYS 527 1_555 G ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? metalc ? metalc3 A SG CYS 531 A CYS 530 1_555 G ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc4 B SG CYS 485 B CYS 484 1_555 J ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc5 B SG CYS 490 B CYS 489 1_555 J ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc6 B SG CYS 528 B CYS 527 1_555 J ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc7 B SG CYS 531 B CYS 530 1_555 J ZN ZN . B ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc8 C SG CYS 485 C CYS 484 1_555 L ZN ZN . C ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc9 C SG CYS 490 C CYS 489 1_555 L ZN ZN . C ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc10 C SG CYS 528 C CYS 527 1_555 L ZN ZN . C ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc11 C SG CYS 531 C CYS 530 1_555 L ZN ZN . C ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc12 D SG CYS 490 D CYS 489 1_555 P ZN ZN . D ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc13 D SG CYS 528 D CYS 527 1_555 P ZN ZN . D ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc14 D SG CYS 531 D CYS 530 1_555 P ZN ZN . D ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc15 E SG CYS 485 E CYS 484 1_555 S ZN ZN . E ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc16 E SG CYS 490 E CYS 489 1_555 S ZN ZN . E ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc17 E SG CYS 528 E CYS 527 1_555 S ZN ZN . E ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc18 E SG CYS 531 E CYS 530 1_555 S ZN ZN . E ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc19 F SG CYS 485 F CYS 484 1_555 U ZN ZN . F ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc20 F SG CYS 490 F CYS 489 1_555 U ZN ZN . F ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc21 F SG CYS 528 F CYS 527 1_555 U ZN ZN . F ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc22 F SG CYS 531 F CYS 530 1_555 U ZN ZN . F ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 5ZMM _atom_sites.fract_transf_matrix[1][1] 0.007681 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007175 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003559 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 ZN A 1 601 600 ZN ZN . H 3 SO4 A 1 602 101 SO4 SO4 . I 3 SO4 A 1 603 108 SO4 SO4 . J 2 ZN B 1 601 600 ZN ZN . K 3 SO4 B 1 602 107 SO4 SO4 . L 2 ZN C 1 601 600 ZN ZN . M 3 SO4 C 1 602 102 SO4 SO4 . N 3 SO4 C 1 603 104 SO4 SO4 . O 3 SO4 C 1 604 110 SO4 SO4 . P 2 ZN D 1 601 600 ZN ZN . Q 3 SO4 D 1 602 106 SO4 SO4 . R 3 SO4 D 1 603 111 SO4 SO4 . S 2 ZN E 1 601 600 ZN ZN . T 3 SO4 E 1 602 105 SO4 SO4 . U 2 ZN F 1 601 600 ZN ZN . V 3 SO4 F 1 602 103 SO4 SO4 . W 3 SO4 F 1 603 109 SO4 SO4 . X 4 HOH A 1 701 4 HOH HOH . X 4 HOH A 2 702 11 HOH HOH . X 4 HOH A 3 703 10 HOH HOH . X 4 HOH A 4 704 22 HOH HOH . X 4 HOH A 5 705 19 HOH HOH . X 4 HOH A 6 706 5 HOH HOH . X 4 HOH A 7 707 3 HOH HOH . Y 4 HOH B 1 701 15 HOH HOH . Y 4 HOH B 2 702 23 HOH HOH . Y 4 HOH B 3 703 18 HOH HOH . Y 4 HOH B 4 704 7 HOH HOH . Y 4 HOH B 5 705 13 HOH HOH . Z 4 HOH C 1 701 8 HOH HOH . Z 4 HOH C 2 702 21 HOH HOH . Z 4 HOH C 3 703 14 HOH HOH . Z 4 HOH C 4 704 12 HOH HOH . Z 4 HOH C 5 705 9 HOH HOH . AA 4 HOH D 1 701 20 HOH HOH . AA 4 HOH D 2 702 17 HOH HOH . AA 4 HOH D 3 703 16 HOH HOH . AA 4 HOH D 4 704 24 HOH HOH . BA 4 HOH F 1 701 2 HOH HOH . BA 4 HOH F 2 702 1 HOH HOH . BA 4 HOH F 3 703 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . N 3 249.797 133.258 535.17 1 54.88 ? S SO4 603 C 1 HETATM 2 O O1 SO4 . . . N 3 250.45 133.977 534.057 1 50.88 ? O1 SO4 603 C 1 HETATM 3 O O2 SO4 . . . N 3 248.519 132.616 534.722 1 54.27 ? O2 SO4 603 C 1 HETATM 4 O O3 SO4 . . . N 3 250.832 132.266 535.569 1 55.21 ? O3 SO4 603 C 1 HETATM 5 O O4 SO4 . . . N 3 249.454 134.181 536.312 1 54.76 ? O4 SO4 603 C 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #