data_5ZNC # _model_server_result.job_id dcA76kj2erebZCQL3dDV8Q _model_server_result.datetime_utc '2024-10-14 19:15:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5znc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5ZNC # _exptl.entry_id 5ZNC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 324.417 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Quinine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5ZNC _cell.length_a 95.123 _cell.length_b 95.123 _cell.length_c 47.141 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZNC _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_765 -y+2,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 142.6845 82.378934 0 3 'crystal symmetry operation' 3_675 -x+y+1,-x+2,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 164.757869 0 4 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 47.141 5 'crystal symmetry operation' 5_676 x-y+1,-y+2,-z+1 1 0 0 0 -1 0 0 0 -1 0 164.757869 47.141 6 'crystal symmetry operation' 6_766 -x+2,-x+y+1,-z+1 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 142.6845 82.378934 47.141 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H24 N2 O2' _chem_comp.formula_weight 324.417 _chem_comp.id QI9 _chem_comp.mon_nstd_flag . _chem_comp.name Quinine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "(3alpha,8alpha,9R)-6'-methoxycinchonan-9-ol" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 N1 QI9 sing 281 n n C16 C17 QI9 sing 282 n n N1 C15 QI9 sing 283 n n N1 C11 QI9 sing 284 n n C15 C14 QI9 sing 285 n n C17 C18 QI9 sing 286 n n C17 C13 QI9 sing 287 n n O C QI9 sing 288 n n O C1 QI9 sing 289 n n C19 C18 QI9 doub 290 n n C14 C13 QI9 sing 291 n n C11 C10 QI9 sing 292 n n C11 C12 QI9 sing 293 n n C13 C12 QI9 sing 294 n n C1 C2 QI9 doub 295 n y C1 C9 QI9 sing 296 n y C2 C3 QI9 sing 297 n y C10 O1 QI9 sing 298 n n C10 C4 QI9 sing 299 n n C9 C8 QI9 doub 300 n y C3 C4 QI9 doub 301 n y C3 C7 QI9 sing 302 n y C4 C5 QI9 sing 303 n y C8 C7 QI9 sing 304 n y C7 N QI9 doub 305 n y C5 C6 QI9 doub 306 n y N C6 QI9 sing 307 n y O1 H1 QI9 sing 308 n n C10 H2 QI9 sing 309 n n C11 H3 QI9 sing 310 n n C15 H5 QI9 sing 311 n n C15 H6 QI9 sing 312 n n C14 H7 QI9 sing 313 n n C14 H8 QI9 sing 314 n n C16 H9 QI9 sing 315 n n C16 H10 QI9 sing 316 n n C17 H11 QI9 sing 317 n n C18 H12 QI9 sing 318 n n C19 H13 QI9 sing 319 n n C19 H14 QI9 sing 320 n n C13 H15 QI9 sing 321 n n C12 H16 QI9 sing 322 n n C12 H17 QI9 sing 323 n n C5 H18 QI9 sing 324 n n C6 H19 QI9 sing 325 n n C2 H20 QI9 sing 326 n n C8 H21 QI9 sing 327 n n C9 H22 QI9 sing 328 n n C H23 QI9 sing 329 n n C H24 QI9 sing 330 n n C H25 QI9 sing 331 n n # _atom_sites.entry_id 5ZNC _atom_sites.fract_transf_matrix[1][1] 0.010513 _atom_sites.fract_transf_matrix[1][2] 0.00607 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012139 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021213 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QI9 A 1 301 1 QI9 QI9 . C 3 PO4 A 1 302 1 PO4 PO4 . D 3 PO4 A 1 303 2 PO4 PO4 . E 3 PO4 A 1 304 3 PO4 PO4 . F 4 HOH A 1 401 248 HOH HOH . F 4 HOH A 2 402 371 HOH HOH . F 4 HOH A 3 403 94 HOH HOH . F 4 HOH A 4 404 383 HOH HOH . F 4 HOH A 5 405 172 HOH HOH . F 4 HOH A 6 406 70 HOH HOH . F 4 HOH A 7 407 108 HOH HOH . F 4 HOH A 8 408 73 HOH HOH . F 4 HOH A 9 409 362 HOH HOH . F 4 HOH A 10 410 58 HOH HOH . F 4 HOH A 11 411 3 HOH HOH . F 4 HOH A 12 412 10 HOH HOH . F 4 HOH A 13 413 368 HOH HOH . F 4 HOH A 14 414 13 HOH HOH . F 4 HOH A 15 415 119 HOH HOH . F 4 HOH A 16 416 158 HOH HOH . F 4 HOH A 17 417 22 HOH HOH . F 4 HOH A 18 418 30 HOH HOH . F 4 HOH A 19 419 87 HOH HOH . F 4 HOH A 20 420 34 HOH HOH . F 4 HOH A 21 421 133 HOH HOH . F 4 HOH A 22 422 96 HOH HOH . F 4 HOH A 23 423 100 HOH HOH . F 4 HOH A 24 424 104 HOH HOH . F 4 HOH A 25 425 363 HOH HOH . F 4 HOH A 26 426 106 HOH HOH . F 4 HOH A 27 427 15 HOH HOH . F 4 HOH A 28 428 20 HOH HOH . F 4 HOH A 29 429 32 HOH HOH . F 4 HOH A 30 430 385 HOH HOH . F 4 HOH A 31 431 85 HOH HOH . F 4 HOH A 32 432 62 HOH HOH . F 4 HOH A 33 433 387 HOH HOH . F 4 HOH A 34 434 90 HOH HOH . F 4 HOH A 35 435 145 HOH HOH . F 4 HOH A 36 436 77 HOH HOH . F 4 HOH A 37 437 394 HOH HOH . F 4 HOH A 38 438 45 HOH HOH . F 4 HOH A 39 439 107 HOH HOH . F 4 HOH A 40 440 395 HOH HOH . F 4 HOH A 41 441 4 HOH HOH . F 4 HOH A 42 442 47 HOH HOH . F 4 HOH A 43 443 33 HOH HOH . F 4 HOH A 44 444 12 HOH HOH . F 4 HOH A 45 445 97 HOH HOH . F 4 HOH A 46 446 9 HOH HOH . F 4 HOH A 47 447 51 HOH HOH . F 4 HOH A 48 448 41 HOH HOH . F 4 HOH A 49 449 17 HOH HOH . F 4 HOH A 50 450 16 HOH HOH . F 4 HOH A 51 451 2 HOH HOH . F 4 HOH A 52 452 127 HOH HOH . F 4 HOH A 53 453 105 HOH HOH . F 4 HOH A 54 454 252 HOH HOH . F 4 HOH A 55 455 209 HOH HOH . F 4 HOH A 56 456 36 HOH HOH . F 4 HOH A 57 457 52 HOH HOH . F 4 HOH A 58 458 18 HOH HOH . F 4 HOH A 59 459 111 HOH HOH . F 4 HOH A 60 460 1 HOH HOH . F 4 HOH A 61 461 11 HOH HOH . F 4 HOH A 62 462 82 HOH HOH . F 4 HOH A 63 463 117 HOH HOH . F 4 HOH A 64 464 396 HOH HOH . F 4 HOH A 65 465 28 HOH HOH . F 4 HOH A 66 466 200 HOH HOH . F 4 HOH A 67 467 8 HOH HOH . F 4 HOH A 68 468 19 HOH HOH . F 4 HOH A 69 469 42 HOH HOH . F 4 HOH A 70 470 162 HOH HOH . F 4 HOH A 71 471 64 HOH HOH . F 4 HOH A 72 472 7 HOH HOH . F 4 HOH A 73 473 60 HOH HOH . F 4 HOH A 74 474 109 HOH HOH . F 4 HOH A 75 475 142 HOH HOH . F 4 HOH A 76 476 103 HOH HOH . F 4 HOH A 77 477 38 HOH HOH . F 4 HOH A 78 478 53 HOH HOH . F 4 HOH A 79 479 5 HOH HOH . F 4 HOH A 80 480 214 HOH HOH . F 4 HOH A 81 481 21 HOH HOH . F 4 HOH A 82 482 326 HOH HOH . F 4 HOH A 83 483 364 HOH HOH . F 4 HOH A 84 484 91 HOH HOH . F 4 HOH A 85 485 27 HOH HOH . F 4 HOH A 86 486 83 HOH HOH . F 4 HOH A 87 487 25 HOH HOH . F 4 HOH A 88 488 231 HOH HOH . F 4 HOH A 89 489 188 HOH HOH . F 4 HOH A 90 490 207 HOH HOH . F 4 HOH A 91 491 113 HOH HOH . F 4 HOH A 92 492 89 HOH HOH . F 4 HOH A 93 493 373 HOH HOH . F 4 HOH A 94 494 131 HOH HOH . F 4 HOH A 95 495 50 HOH HOH . F 4 HOH A 96 496 54 HOH HOH . F 4 HOH A 97 497 66 HOH HOH . F 4 HOH A 98 498 23 HOH HOH . F 4 HOH A 99 499 134 HOH HOH . F 4 HOH A 100 500 63 HOH HOH . F 4 HOH A 101 501 24 HOH HOH . F 4 HOH A 102 502 365 HOH HOH . F 4 HOH A 103 503 48 HOH HOH . F 4 HOH A 104 504 81 HOH HOH . F 4 HOH A 105 505 44 HOH HOH . F 4 HOH A 106 506 168 HOH HOH . F 4 HOH A 107 507 65 HOH HOH . F 4 HOH A 108 508 79 HOH HOH . F 4 HOH A 109 509 46 HOH HOH . F 4 HOH A 110 510 186 HOH HOH . F 4 HOH A 111 511 56 HOH HOH . F 4 HOH A 112 512 228 HOH HOH . F 4 HOH A 113 513 255 HOH HOH . F 4 HOH A 114 514 258 HOH HOH . F 4 HOH A 115 515 95 HOH HOH . F 4 HOH A 116 516 135 HOH HOH . F 4 HOH A 117 517 390 HOH HOH . F 4 HOH A 118 518 169 HOH HOH . F 4 HOH A 119 519 372 HOH HOH . F 4 HOH A 120 520 122 HOH HOH . F 4 HOH A 121 521 80 HOH HOH . F 4 HOH A 122 522 76 HOH HOH . F 4 HOH A 123 523 115 HOH HOH . F 4 HOH A 124 524 71 HOH HOH . F 4 HOH A 125 525 121 HOH HOH . F 4 HOH A 126 526 370 HOH HOH . F 4 HOH A 127 527 49 HOH HOH . F 4 HOH A 128 528 72 HOH HOH . F 4 HOH A 129 529 88 HOH HOH . F 4 HOH A 130 530 144 HOH HOH . F 4 HOH A 131 531 187 HOH HOH . F 4 HOH A 132 532 165 HOH HOH . F 4 HOH A 133 533 148 HOH HOH . F 4 HOH A 134 534 369 HOH HOH . F 4 HOH A 135 535 274 HOH HOH . F 4 HOH A 136 536 323 HOH HOH . F 4 HOH A 137 537 140 HOH HOH . F 4 HOH A 138 538 35 HOH HOH . F 4 HOH A 139 539 192 HOH HOH . F 4 HOH A 140 540 185 HOH HOH . F 4 HOH A 141 541 123 HOH HOH . F 4 HOH A 142 542 101 HOH HOH . F 4 HOH A 143 543 391 HOH HOH . F 4 HOH A 144 544 14 HOH HOH . F 4 HOH A 145 545 201 HOH HOH . F 4 HOH A 146 546 37 HOH HOH . F 4 HOH A 147 547 366 HOH HOH . F 4 HOH A 148 548 29 HOH HOH . F 4 HOH A 149 549 392 HOH HOH . F 4 HOH A 150 550 327 HOH HOH . F 4 HOH A 151 551 149 HOH HOH . F 4 HOH A 152 552 92 HOH HOH . F 4 HOH A 153 553 157 HOH HOH . F 4 HOH A 154 554 40 HOH HOH . F 4 HOH A 155 555 84 HOH HOH . F 4 HOH A 156 556 132 HOH HOH . F 4 HOH A 157 557 146 HOH HOH . F 4 HOH A 158 558 99 HOH HOH . F 4 HOH A 159 559 26 HOH HOH . F 4 HOH A 160 560 204 HOH HOH . F 4 HOH A 161 561 380 HOH HOH . F 4 HOH A 162 562 342 HOH HOH . F 4 HOH A 163 563 151 HOH HOH . F 4 HOH A 164 564 137 HOH HOH . F 4 HOH A 165 565 114 HOH HOH . F 4 HOH A 166 566 163 HOH HOH . F 4 HOH A 167 567 61 HOH HOH . F 4 HOH A 168 568 160 HOH HOH . F 4 HOH A 169 569 283 HOH HOH . F 4 HOH A 170 570 153 HOH HOH . F 4 HOH A 171 571 67 HOH HOH . F 4 HOH A 172 572 375 HOH HOH . F 4 HOH A 173 573 247 HOH HOH . F 4 HOH A 174 574 102 HOH HOH . F 4 HOH A 175 575 55 HOH HOH . F 4 HOH A 176 576 376 HOH HOH . F 4 HOH A 177 577 155 HOH HOH . F 4 HOH A 178 578 333 HOH HOH . F 4 HOH A 179 579 128 HOH HOH . F 4 HOH A 180 580 393 HOH HOH . F 4 HOH A 181 581 171 HOH HOH . F 4 HOH A 182 582 120 HOH HOH . F 4 HOH A 183 583 367 HOH HOH . F 4 HOH A 184 584 399 HOH HOH . F 4 HOH A 185 585 156 HOH HOH . F 4 HOH A 186 586 147 HOH HOH . F 4 HOH A 187 587 329 HOH HOH . F 4 HOH A 188 588 116 HOH HOH . F 4 HOH A 189 589 402 HOH HOH . F 4 HOH A 190 590 401 HOH HOH . F 4 HOH A 191 591 59 HOH HOH . F 4 HOH A 192 592 361 HOH HOH . F 4 HOH A 193 593 150 HOH HOH . F 4 HOH A 194 594 233 HOH HOH . F 4 HOH A 195 595 86 HOH HOH . F 4 HOH A 196 596 348 HOH HOH . F 4 HOH A 197 597 398 HOH HOH . F 4 HOH A 198 598 129 HOH HOH . F 4 HOH A 199 599 378 HOH HOH . F 4 HOH A 200 600 93 HOH HOH . F 4 HOH A 201 601 170 HOH HOH . F 4 HOH A 202 602 403 HOH HOH . F 4 HOH A 203 603 75 HOH HOH . F 4 HOH A 204 604 384 HOH HOH . F 4 HOH A 205 605 195 HOH HOH . F 4 HOH A 206 606 389 HOH HOH . F 4 HOH A 207 607 261 HOH HOH . F 4 HOH A 208 608 374 HOH HOH . F 4 HOH A 209 609 136 HOH HOH . F 4 HOH A 210 610 331 HOH HOH . F 4 HOH A 211 611 386 HOH HOH . F 4 HOH A 212 612 335 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 QI9 . . . B 2 65.51 65.629 14.948 1 12.27 ? O1 QI9 301 A 1 HETATM 2 C C10 QI9 . . . B 2 65.955 64.683 13.973 1 12.43 ? C10 QI9 301 A 1 HETATM 3 C C11 QI9 . . . B 2 64.999 63.451 13.955 1 12.8 ? C11 QI9 301 A 1 HETATM 4 N N1 QI9 . . . B 2 65.351 62.442 12.872 1 14.46 ? N1 QI9 301 A 1 HETATM 5 C C15 QI9 . . . B 2 66.701 61.892 13.135 1 14.93 ? C15 QI9 301 A 1 HETATM 6 C C14 QI9 . . . B 2 66.862 61.51 14.638 1 14.51 ? C14 QI9 301 A 1 HETATM 7 C C16 QI9 . . . B 2 64.378 61.345 13.014 1 13.92 ? C16 QI9 301 A 1 HETATM 8 C C17 QI9 . . . B 2 64.664 60.459 14.264 1 14.66 ? C17 QI9 301 A 1 HETATM 9 C C18 QI9 . . . B 2 63.399 59.88 14.86 1 15.88 ? C18 QI9 301 A 1 HETATM 10 C C19 QI9 . . . B 2 63.122 58.61 14.936 1 15.83 ? C19 QI9 301 A 1 HETATM 11 C C13 QI9 . . . B 2 65.472 61.336 15.233 1 12.94 ? C13 QI9 301 A 1 HETATM 12 C C12 QI9 . . . B 2 64.839 62.743 15.33 1 12.5 ? C12 QI9 301 A 1 HETATM 13 C C4 QI9 . . . B 2 66.013 65.285 12.556 1 12.95 ? C4 QI9 301 A 1 HETATM 14 C C5 QI9 . . . B 2 67.103 65.003 11.782 1 13.59 ? C5 QI9 301 A 1 HETATM 15 C C6 QI9 . . . B 2 67.113 65.371 10.428 1 14.33 ? C6 QI9 301 A 1 HETATM 16 N N QI9 . . . B 2 66.111 65.999 9.827 1 12.99 ? N QI9 301 A 1 HETATM 17 C C7 QI9 . . . B 2 65.012 66.317 10.567 1 12.34 ? C7 QI9 301 A 1 HETATM 18 C C3 QI9 . . . B 2 64.917 65.996 11.953 1 12.95 ? C3 QI9 301 A 1 HETATM 19 C C2 QI9 . . . B 2 63.76 66.385 12.664 1 11.74 ? C2 QI9 301 A 1 HETATM 20 C C8 QI9 . . . B 2 63.974 67.02 9.941 1 12.66 ? C8 QI9 301 A 1 HETATM 21 C C9 QI9 . . . B 2 62.858 67.37 10.638 1 10.56 ? C9 QI9 301 A 1 HETATM 22 C C1 QI9 . . . B 2 62.807 67.151 12.044 1 10.76 ? C1 QI9 301 A 1 HETATM 23 O O QI9 . . . B 2 61.633 67.595 12.567 1 10.66 ? O QI9 301 A 1 HETATM 24 C C QI9 . . . B 2 61.507 67.568 14.004 1 11.29 ? C QI9 301 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 24 #