data_5ZNP # _model_server_result.job_id runFBk8WVgbYNynGWMzLPw _model_server_result.datetime_utc '2024-12-26 19:28:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5znp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 5ZNP # _exptl.entry_id 5ZNP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ZNP _cell.length_a 44.34 _cell.length_b 91.909 _cell.length_c 114.37 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZNP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,I 1 1 B,D,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C THR 3 P THR 3 1_555 C N M3L 4 P M3L 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 C C M3L 4 P M3L 4 1_555 C N GLN 5 P GLN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 D C THR 3 Q THR 3 1_555 D N M3L 4 Q M3L 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale4 D C M3L 4 Q M3L 4 1_555 D N GLN 5 Q GLN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A SG CYS 143 A CYS 142 1_555 E ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc2 A SG CYS 145 A CYS 144 1_555 E ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.532 ? metalc ? metalc3 A SG CYS 158 A CYS 157 1_555 F ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc4 A SG CYS 161 A CYS 160 1_555 F ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? metalc ? metalc5 A ND1 HIS 166 A HIS 165 1_555 E ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc6 A SG CYS 169 A CYS 168 1_555 E ZN ZN . A ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? metalc ? metalc7 A SG CYS 185 A CYS 184 1_555 F ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc8 A SG CYS 188 A CYS 187 1_555 F ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? metalc ? metalc9 B SG CYS 143 B CYS 142 1_555 G ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? metalc ? metalc10 B SG CYS 145 B CYS 144 1_555 G ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc11 B SG CYS 158 B CYS 157 1_555 H ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.893 ? metalc ? metalc12 B N CYS 161 B CYS 160 1_555 H ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? metalc ? metalc13 B SG CYS 161 B CYS 160 1_555 H ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc14 B ND1 HIS 166 B HIS 165 1_555 G ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc15 B SG CYS 169 B CYS 168 1_555 G ZN ZN . B ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? metalc ? metalc16 B SG CYS 185 B CYS 184 1_555 H ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5ZNP _atom_sites.fract_transf_matrix[1][1] 0.022553 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01088 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008744 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 501 501 ZN ZN . F 3 ZN A 1 502 502 ZN ZN . G 3 ZN B 1 501 501 ZN ZN . H 3 ZN B 1 502 502 ZN ZN . I 4 HOH A 1 601 6 HOH HOH . I 4 HOH A 2 602 1 HOH HOH . I 4 HOH A 3 603 5 HOH HOH . I 4 HOH A 4 604 21 HOH HOH . I 4 HOH A 5 605 18 HOH HOH . I 4 HOH A 6 606 17 HOH HOH . I 4 HOH A 7 607 16 HOH HOH . I 4 HOH A 8 608 3 HOH HOH . I 4 HOH A 9 609 7 HOH HOH . I 4 HOH A 10 610 2 HOH HOH . I 4 HOH A 11 611 4 HOH HOH . I 4 HOH A 12 612 13 HOH HOH . I 4 HOH A 13 613 19 HOH HOH . J 4 HOH B 1 601 22 HOH HOH . J 4 HOH B 2 602 9 HOH HOH . J 4 HOH B 3 603 8 HOH HOH . J 4 HOH B 4 604 14 HOH HOH . J 4 HOH B 5 605 10 HOH HOH . J 4 HOH B 6 606 12 HOH HOH . J 4 HOH B 7 607 15 HOH HOH . J 4 HOH B 8 608 20 HOH HOH . J 4 HOH B 9 609 11 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -31.307 _atom_site.Cartn_y -0.4 _atom_site.Cartn_z 14.333 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 78.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #