data_5ZO8
#
_model_server_result.job_id            cQDvaruogUIlEmJWncOzmg 
_model_server_result.datetime_utc      '2024-10-22 03:44:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5zo8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":601}' 
#
_entry.id    5ZO8 
#
_exptl.entry_id    5ZO8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          112.99 
_cell.angle_gamma         90 
_cell.entry_id            5ZO8 
_cell.length_a            95.293 
_cell.length_b            50.724 
_cell.length_c            83.355 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ZO8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,O 1 1 
B,I,J,K,L,M,N,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 103 A THR 112 1_555 D MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? 
metalc ? metalc2 A OE1 GLU 158 A GLU 167 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.806 ? 
metalc ? metalc3 C O1B ADP . A ADP 600 1_555 D MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
metalc ? metalc4 D MG MG . A MG 601 1_555 O O HOH . A HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc5 D MG MG . A MG 601 1_555 O O HOH . A HOH 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
metalc ? metalc6 D MG MG . A MG 601 1_555 O O HOH . A HOH 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
metalc ? metalc7 D MG MG . A MG 601 1_555 O O HOH . A HOH 749 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? 
metalc ? metalc8 G O1 SO4 . A SO4 604 1_555 H NA NA . A NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.74 ? 
metalc ? metalc9 H NA NA . A NA 605 1_555 O O HOH . A HOH 759 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? 
metalc ? metalc10 B OG1 THR 103 B THR 112 1_555 J MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
metalc ? metalc11 B OE1 GLU 158 B GLU 167 1_555 N NA NA . B NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.826 ? 
metalc ? metalc12 I O3B ADP . B ADP 600 1_555 J MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? 
metalc ? metalc13 J MG MG . B MG 601 1_555 P O HOH . B HOH 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
metalc ? metalc14 J MG MG . B MG 601 1_555 P O HOH . B HOH 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? 
metalc ? metalc15 J MG MG . B MG 601 1_555 P O HOH . B HOH 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc16 J MG MG . B MG 601 1_555 P O HOH . B HOH 745 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? 
metalc ? metalc17 M O4 SO4 . B SO4 604 1_555 N NA NA . B NA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5ZO8 
_atom_sites.fract_transf_matrix[1][1]    0.010494 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004452 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019715 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013032 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ADP A 1 600 600 ADP ADP . 
D 3 MG A 1 601 601 MG MG . 
E 4 4C5 A 1 602 602 4C5 4C5 . 
F 5 SO4 A 1 603 603 SO4 SO4 . 
G 5 SO4 A 1 604 604 SO4 SO4 . 
H 6 NA A 1 605 605 NA NA . 
I 2 ADP B 1 600 600 ADP ADP . 
J 3 MG B 1 601 601 MG MG . 
K 4 4C5 B 1 602 602 4C5 4C5 . 
L 5 SO4 B 1 603 603 SO4 SO4 . 
M 5 SO4 B 1 604 604 SO4 SO4 . 
N 6 NA B 1 605 605 NA NA . 
O 7 HOH A 1 701 41 HOH HOH . 
O 7 HOH A 2 702 16 HOH HOH . 
O 7 HOH A 3 703 49 HOH HOH . 
O 7 HOH A 4 704 58 HOH HOH . 
O 7 HOH A 5 705 78 HOH HOH . 
O 7 HOH A 6 706 102 HOH HOH . 
O 7 HOH A 7 707 38 HOH HOH . 
O 7 HOH A 8 708 53 HOH HOH . 
O 7 HOH A 9 709 66 HOH HOH . 
O 7 HOH A 10 710 5 HOH HOH . 
O 7 HOH A 11 711 13 HOH HOH . 
O 7 HOH A 12 712 106 HOH HOH . 
O 7 HOH A 13 713 57 HOH HOH . 
O 7 HOH A 14 714 21 HOH HOH . 
O 7 HOH A 15 715 48 HOH HOH . 
O 7 HOH A 16 716 91 HOH HOH . 
O 7 HOH A 17 717 2 HOH HOH . 
O 7 HOH A 18 718 8 HOH HOH . 
O 7 HOH A 19 719 3 HOH HOH . 
O 7 HOH A 20 720 83 HOH HOH . 
O 7 HOH A 21 721 31 HOH HOH . 
O 7 HOH A 22 722 82 HOH HOH . 
O 7 HOH A 23 723 11 HOH HOH . 
O 7 HOH A 24 724 7 HOH HOH . 
O 7 HOH A 25 725 6 HOH HOH . 
O 7 HOH A 26 726 75 HOH HOH . 
O 7 HOH A 27 727 39 HOH HOH . 
O 7 HOH A 28 728 62 HOH HOH . 
O 7 HOH A 29 729 79 HOH HOH . 
O 7 HOH A 30 730 45 HOH HOH . 
O 7 HOH A 31 731 27 HOH HOH . 
O 7 HOH A 32 732 107 HOH HOH . 
O 7 HOH A 33 733 100 HOH HOH . 
O 7 HOH A 34 734 101 HOH HOH . 
O 7 HOH A 35 735 18 HOH HOH . 
O 7 HOH A 36 736 56 HOH HOH . 
O 7 HOH A 37 737 55 HOH HOH . 
O 7 HOH A 38 738 28 HOH HOH . 
O 7 HOH A 39 739 94 HOH HOH . 
O 7 HOH A 40 740 105 HOH HOH . 
O 7 HOH A 41 741 96 HOH HOH . 
O 7 HOH A 42 742 93 HOH HOH . 
O 7 HOH A 43 743 61 HOH HOH . 
O 7 HOH A 44 744 85 HOH HOH . 
O 7 HOH A 45 745 20 HOH HOH . 
O 7 HOH A 46 746 10 HOH HOH . 
O 7 HOH A 47 747 97 HOH HOH . 
O 7 HOH A 48 748 98 HOH HOH . 
O 7 HOH A 49 749 54 HOH HOH . 
O 7 HOH A 50 750 92 HOH HOH . 
O 7 HOH A 51 751 1 HOH HOH . 
O 7 HOH A 52 752 47 HOH HOH . 
O 7 HOH A 53 753 74 HOH HOH . 
O 7 HOH A 54 754 15 HOH HOH . 
O 7 HOH A 55 755 29 HOH HOH . 
O 7 HOH A 56 756 36 HOH HOH . 
O 7 HOH A 57 757 24 HOH HOH . 
O 7 HOH A 58 758 67 HOH HOH . 
O 7 HOH A 59 759 70 HOH HOH . 
P 7 HOH B 1 701 72 HOH HOH . 
P 7 HOH B 2 702 64 HOH HOH . 
P 7 HOH B 3 703 26 HOH HOH . 
P 7 HOH B 4 704 77 HOH HOH . 
P 7 HOH B 5 705 84 HOH HOH . 
P 7 HOH B 6 706 42 HOH HOH . 
P 7 HOH B 7 707 12 HOH HOH . 
P 7 HOH B 8 708 25 HOH HOH . 
P 7 HOH B 9 709 86 HOH HOH . 
P 7 HOH B 10 710 88 HOH HOH . 
P 7 HOH B 11 711 22 HOH HOH . 
P 7 HOH B 12 712 68 HOH HOH . 
P 7 HOH B 13 713 95 HOH HOH . 
P 7 HOH B 14 714 35 HOH HOH . 
P 7 HOH B 15 715 87 HOH HOH . 
P 7 HOH B 16 716 60 HOH HOH . 
P 7 HOH B 17 717 104 HOH HOH . 
P 7 HOH B 18 718 80 HOH HOH . 
P 7 HOH B 19 719 90 HOH HOH . 
P 7 HOH B 20 720 73 HOH HOH . 
P 7 HOH B 21 721 50 HOH HOH . 
P 7 HOH B 22 722 103 HOH HOH . 
P 7 HOH B 23 723 71 HOH HOH . 
P 7 HOH B 24 724 17 HOH HOH . 
P 7 HOH B 25 725 51 HOH HOH . 
P 7 HOH B 26 726 89 HOH HOH . 
P 7 HOH B 27 727 43 HOH HOH . 
P 7 HOH B 28 728 32 HOH HOH . 
P 7 HOH B 29 729 59 HOH HOH . 
P 7 HOH B 30 730 4 HOH HOH . 
P 7 HOH B 31 731 37 HOH HOH . 
P 7 HOH B 32 732 40 HOH HOH . 
P 7 HOH B 33 733 44 HOH HOH . 
P 7 HOH B 34 734 52 HOH HOH . 
P 7 HOH B 35 735 81 HOH HOH . 
P 7 HOH B 36 736 65 HOH HOH . 
P 7 HOH B 37 737 33 HOH HOH . 
P 7 HOH B 38 738 76 HOH HOH . 
P 7 HOH B 39 739 23 HOH HOH . 
P 7 HOH B 40 740 46 HOH HOH . 
P 7 HOH B 41 741 14 HOH HOH . 
P 7 HOH B 42 742 30 HOH HOH . 
P 7 HOH B 43 743 9 HOH HOH . 
P 7 HOH B 44 744 19 HOH HOH . 
P 7 HOH B 45 745 69 HOH HOH . 
P 7 HOH B 46 746 34 HOH HOH . 
P 7 HOH B 47 747 63 HOH HOH . 
P 7 HOH B 48 748 99 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -16.049 
_atom_site.Cartn_y               -10.217 
_atom_site.Cartn_z               48.607 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        24.35 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           601 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#