data_5ZQO # _model_server_result.job_id 0r-dTLZoIYD6AcxqS-Cluw _model_server_result.datetime_utc '2024-11-19 20:36:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zqo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1206}' # _entry.id 5ZQO # _exptl.entry_id 5ZQO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ZQO _cell.length_a 66.897 _cell.length_b 66.897 _cell.length_c 117.08 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZQO _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 G N N ? 6 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 135 A CYS 1081 1_555 C ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc2 A ND1 HIS 138 A HIS 1084 1_555 C ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc3 A SG CYS 143 A CYS 1089 1_555 C ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc4 A SG CYS 146 A CYS 1092 1_555 C ZN ZN . A ZN 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 181 n n C1 C2 GOL sing 182 n n C1 H11 GOL sing 183 n n C1 H12 GOL sing 184 n n O1 HO1 GOL sing 185 n n C2 O2 GOL sing 186 n n C2 C3 GOL sing 187 n n C2 H2 GOL sing 188 n n O2 HO2 GOL sing 189 n n C3 O3 GOL sing 190 n n C3 H31 GOL sing 191 n n C3 H32 GOL sing 192 n n O3 HO3 GOL sing 193 n n # _atom_sites.entry_id 5ZQO _atom_sites.fract_transf_matrix[1][1] 0.014948 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014948 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008541 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 1201 1201 ZN ZN . D 4 9GX A 1 1202 1202 9GX 9GX . E 5 SO4 A 1 1203 1203 SO4 SO4 . F 5 SO4 A 1 1204 1204 SO4 SO4 . G 6 GOL A 1 1205 1206 GOL GOL . H 6 GOL A 1 1206 1207 GOL GOL . I 5 SO4 B 1 1201 1205 SO4 SO4 . J 7 HOH A 1 1301 1301 HOH HOH . J 7 HOH A 2 1302 1302 HOH HOH . J 7 HOH A 3 1303 1303 HOH HOH . J 7 HOH A 4 1304 1305 HOH HOH . J 7 HOH A 5 1305 1306 HOH HOH . J 7 HOH A 6 1306 1308 HOH HOH . J 7 HOH A 7 1307 1309 HOH HOH . J 7 HOH A 8 1308 1310 HOH HOH . J 7 HOH A 9 1309 1311 HOH HOH . J 7 HOH A 10 1310 1313 HOH HOH . J 7 HOH A 11 1311 1314 HOH HOH . J 7 HOH A 12 1312 1317 HOH HOH . J 7 HOH A 13 1313 1318 HOH HOH . J 7 HOH A 14 1314 1319 HOH HOH . J 7 HOH A 15 1315 1320 HOH HOH . J 7 HOH A 16 1316 1321 HOH HOH . J 7 HOH A 17 1317 1323 HOH HOH . J 7 HOH A 18 1318 1324 HOH HOH . J 7 HOH A 19 1319 1325 HOH HOH . J 7 HOH A 20 1320 1326 HOH HOH . J 7 HOH A 21 1321 1327 HOH HOH . J 7 HOH A 22 1322 1328 HOH HOH . J 7 HOH A 23 1323 1330 HOH HOH . J 7 HOH A 24 1324 1333 HOH HOH . J 7 HOH A 25 1325 1334 HOH HOH . J 7 HOH A 26 1326 1335 HOH HOH . J 7 HOH A 27 1327 1336 HOH HOH . J 7 HOH A 28 1328 1337 HOH HOH . J 7 HOH A 29 1329 1338 HOH HOH . J 7 HOH A 30 1330 1339 HOH HOH . J 7 HOH A 31 1331 1340 HOH HOH . J 7 HOH A 32 1332 1341 HOH HOH . J 7 HOH A 33 1333 1342 HOH HOH . J 7 HOH A 34 1334 1346 HOH HOH . J 7 HOH A 35 1335 1347 HOH HOH . J 7 HOH A 36 1336 1348 HOH HOH . J 7 HOH A 37 1337 1349 HOH HOH . J 7 HOH A 38 1338 1351 HOH HOH . J 7 HOH A 39 1339 1353 HOH HOH . J 7 HOH A 40 1340 1355 HOH HOH . J 7 HOH A 41 1341 1356 HOH HOH . J 7 HOH A 42 1342 1358 HOH HOH . J 7 HOH A 43 1343 1360 HOH HOH . J 7 HOH A 44 1344 1361 HOH HOH . J 7 HOH A 45 1345 1363 HOH HOH . J 7 HOH A 46 1346 1364 HOH HOH . J 7 HOH A 47 1347 1365 HOH HOH . J 7 HOH A 48 1348 1366 HOH HOH . J 7 HOH A 49 1349 1367 HOH HOH . J 7 HOH A 50 1350 1368 HOH HOH . J 7 HOH A 51 1351 1369 HOH HOH . J 7 HOH A 52 1352 1370 HOH HOH . J 7 HOH A 53 1353 1371 HOH HOH . J 7 HOH A 54 1354 1372 HOH HOH . J 7 HOH A 55 1355 1373 HOH HOH . J 7 HOH A 56 1356 1375 HOH HOH . J 7 HOH A 57 1357 1376 HOH HOH . J 7 HOH A 58 1358 1377 HOH HOH . J 7 HOH A 59 1359 1378 HOH HOH . J 7 HOH A 60 1360 1379 HOH HOH . J 7 HOH A 61 1361 1380 HOH HOH . J 7 HOH A 62 1362 1382 HOH HOH . J 7 HOH A 63 1363 1383 HOH HOH . J 7 HOH A 64 1364 1384 HOH HOH . J 7 HOH A 65 1365 1385 HOH HOH . J 7 HOH A 66 1366 1386 HOH HOH . J 7 HOH A 67 1367 1387 HOH HOH . J 7 HOH A 68 1368 1388 HOH HOH . J 7 HOH A 69 1369 1390 HOH HOH . J 7 HOH A 70 1370 1392 HOH HOH . J 7 HOH A 71 1371 1394 HOH HOH . J 7 HOH A 72 1372 1396 HOH HOH . J 7 HOH A 73 1373 1397 HOH HOH . J 7 HOH A 74 1374 1398 HOH HOH . J 7 HOH A 75 1375 1399 HOH HOH . J 7 HOH A 76 1376 1400 HOH HOH . J 7 HOH A 77 1377 1401 HOH HOH . J 7 HOH A 78 1378 1403 HOH HOH . J 7 HOH A 79 1379 1404 HOH HOH . J 7 HOH A 80 1380 1406 HOH HOH . J 7 HOH A 81 1381 1407 HOH HOH . J 7 HOH A 82 1382 1408 HOH HOH . J 7 HOH A 83 1383 1409 HOH HOH . J 7 HOH A 84 1384 1410 HOH HOH . J 7 HOH A 85 1385 1411 HOH HOH . J 7 HOH A 86 1386 1412 HOH HOH . J 7 HOH A 87 1387 1413 HOH HOH . J 7 HOH A 88 1388 1414 HOH HOH . J 7 HOH A 89 1389 1415 HOH HOH . J 7 HOH A 90 1390 1416 HOH HOH . J 7 HOH A 91 1391 1417 HOH HOH . J 7 HOH A 92 1392 1418 HOH HOH . J 7 HOH A 93 1393 1419 HOH HOH . J 7 HOH A 94 1394 1420 HOH HOH . J 7 HOH A 95 1395 1421 HOH HOH . J 7 HOH A 96 1396 1422 HOH HOH . J 7 HOH A 97 1397 1423 HOH HOH . J 7 HOH A 98 1398 1424 HOH HOH . J 7 HOH A 99 1399 1425 HOH HOH . J 7 HOH A 100 1400 1426 HOH HOH . J 7 HOH A 101 1401 1427 HOH HOH . J 7 HOH A 102 1402 1428 HOH HOH . J 7 HOH A 103 1403 1429 HOH HOH . J 7 HOH A 104 1404 1430 HOH HOH . J 7 HOH A 105 1405 1431 HOH HOH . J 7 HOH A 106 1406 1432 HOH HOH . J 7 HOH A 107 1407 1433 HOH HOH . J 7 HOH A 108 1408 1434 HOH HOH . J 7 HOH A 109 1409 1435 HOH HOH . J 7 HOH A 110 1410 1436 HOH HOH . J 7 HOH A 111 1411 1437 HOH HOH . J 7 HOH A 112 1412 1438 HOH HOH . J 7 HOH A 113 1413 1440 HOH HOH . J 7 HOH A 114 1414 1441 HOH HOH . J 7 HOH A 115 1415 1442 HOH HOH . J 7 HOH A 116 1416 1443 HOH HOH . J 7 HOH A 117 1417 1444 HOH HOH . J 7 HOH A 118 1418 1445 HOH HOH . J 7 HOH A 119 1419 1446 HOH HOH . J 7 HOH A 120 1420 1447 HOH HOH . J 7 HOH A 121 1421 1448 HOH HOH . J 7 HOH A 122 1422 1449 HOH HOH . J 7 HOH A 123 1423 1450 HOH HOH . J 7 HOH A 124 1424 1451 HOH HOH . J 7 HOH A 125 1425 1452 HOH HOH . K 7 HOH B 1 1301 1304 HOH HOH . K 7 HOH B 2 1302 1307 HOH HOH . K 7 HOH B 3 1303 1312 HOH HOH . K 7 HOH B 4 1304 1315 HOH HOH . K 7 HOH B 5 1305 1316 HOH HOH . K 7 HOH B 6 1306 1322 HOH HOH . K 7 HOH B 7 1307 1329 HOH HOH . K 7 HOH B 8 1308 1331 HOH HOH . K 7 HOH B 9 1309 1332 HOH HOH . K 7 HOH B 10 1310 1343 HOH HOH . K 7 HOH B 11 1311 1344 HOH HOH . K 7 HOH B 12 1312 1345 HOH HOH . K 7 HOH B 13 1313 1350 HOH HOH . K 7 HOH B 14 1314 1352 HOH HOH . K 7 HOH B 15 1315 1354 HOH HOH . K 7 HOH B 16 1316 1357 HOH HOH . K 7 HOH B 17 1317 1359 HOH HOH . K 7 HOH B 18 1318 1362 HOH HOH . K 7 HOH B 19 1319 1374 HOH HOH . K 7 HOH B 20 1320 1381 HOH HOH . K 7 HOH B 21 1321 1389 HOH HOH . K 7 HOH B 22 1322 1391 HOH HOH . K 7 HOH B 23 1323 1393 HOH HOH . K 7 HOH B 24 1324 1395 HOH HOH . K 7 HOH B 25 1325 1402 HOH HOH . K 7 HOH B 26 1326 1405 HOH HOH . K 7 HOH B 27 1327 1439 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 6 -0.765 50.788 10.588 1 59.32 ? C1 GOL 1206 A 1 HETATM 2 O O1 GOL . . . H 6 -1.973 50.646 11.294 1 58.68 ? O1 GOL 1206 A 1 HETATM 3 C C2 GOL . . . H 6 -0.848 52.128 9.831 1 58.39 ? C2 GOL 1206 A 1 HETATM 4 O O2 GOL . . . H 6 -0.827 53.186 10.692 1 60.94 ? O2 GOL 1206 A 1 HETATM 5 C C3 GOL . . . H 6 0.355 52.154 8.884 1 59.2 ? C3 GOL 1206 A 1 HETATM 6 O O3 GOL . . . H 6 0.238 53.341 8.167 1 60.83 ? O3 GOL 1206 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 234 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #