data_5ZQY # _model_server_result.job_id zYfol6dtH7IRh1QeK1lqVA _model_server_result.datetime_utc '2025-02-05 10:52:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zqy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5ZQY # _exptl.entry_id 5ZQY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103 _cell.angle_gamma 90 _cell.entry_id 5ZQY _cell.length_a 43.88 _cell.length_b 76.74 _cell.length_c 48.53 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZQY _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 62 A THR 76 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc2 A OD1 ASP 63 A ASP 77 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc3 A OD1 ASP 64 A ASP 78 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc4 A OD1 ASP 300 A ASP 314 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc5 A OD1 ASP 302 A ASP 316 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc6 A OD2 ASP 302 A ASP 316 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc7 A OG1 THR 303 A THR 317 1_555 B MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc8 B MG MG . A MG 401 1_555 D O1D AR6 . A AR6 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc9 B MG MG . A MG 401 1_555 D O3D AR6 . A AR6 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc10 B MG MG . A MG 401 1_555 D O2D AR6 . A AR6 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.869 ? metalc ? metalc11 B MG MG . A MG 401 1_555 E O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc12 B MG MG . A MG 401 1_555 E O HOH . A HOH 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc13 C MG MG . A MG 402 1_555 E O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? metalc ? metalc14 C MG MG . A MG 402 1_555 E O HOH . A HOH 648 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5ZQY _atom_sites.fract_transf_matrix[1][1] 0.022789 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005261 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013031 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021148 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 401 1 MG MG . C 2 MG A 1 402 2 MG MG . D 3 AR6 A 1 403 1 AR6 AR6 . E 4 HOH A 1 501 269 HOH HOH . E 4 HOH A 2 502 159 HOH HOH . E 4 HOH A 3 503 218 HOH HOH . E 4 HOH A 4 504 104 HOH HOH . E 4 HOH A 5 505 288 HOH HOH . E 4 HOH A 6 506 123 HOH HOH . E 4 HOH A 7 507 59 HOH HOH . E 4 HOH A 8 508 111 HOH HOH . E 4 HOH A 9 509 142 HOH HOH . E 4 HOH A 10 510 88 HOH HOH . E 4 HOH A 11 511 170 HOH HOH . E 4 HOH A 12 512 134 HOH HOH . E 4 HOH A 13 513 114 HOH HOH . E 4 HOH A 14 514 310 HOH HOH . E 4 HOH A 15 515 164 HOH HOH . E 4 HOH A 16 516 161 HOH HOH . E 4 HOH A 17 517 153 HOH HOH . E 4 HOH A 18 518 341 HOH HOH . E 4 HOH A 19 519 202 HOH HOH . E 4 HOH A 20 520 242 HOH HOH . E 4 HOH A 21 521 144 HOH HOH . E 4 HOH A 22 522 278 HOH HOH . E 4 HOH A 23 523 107 HOH HOH . E 4 HOH A 24 524 197 HOH HOH . E 4 HOH A 25 525 270 HOH HOH . E 4 HOH A 26 526 20 HOH HOH . E 4 HOH A 27 527 65 HOH HOH . E 4 HOH A 28 528 110 HOH HOH . E 4 HOH A 29 529 45 HOH HOH . E 4 HOH A 30 530 253 HOH HOH . E 4 HOH A 31 531 305 HOH HOH . E 4 HOH A 32 532 121 HOH HOH . E 4 HOH A 33 533 51 HOH HOH . E 4 HOH A 34 534 194 HOH HOH . E 4 HOH A 35 535 352 HOH HOH . E 4 HOH A 36 536 53 HOH HOH . E 4 HOH A 37 537 79 HOH HOH . E 4 HOH A 38 538 292 HOH HOH . E 4 HOH A 39 539 235 HOH HOH . E 4 HOH A 40 540 145 HOH HOH . E 4 HOH A 41 541 151 HOH HOH . E 4 HOH A 42 542 345 HOH HOH . E 4 HOH A 43 543 329 HOH HOH . E 4 HOH A 44 544 1 HOH HOH . E 4 HOH A 45 545 50 HOH HOH . E 4 HOH A 46 546 148 HOH HOH . E 4 HOH A 47 547 39 HOH HOH . E 4 HOH A 48 548 312 HOH HOH . E 4 HOH A 49 549 8 HOH HOH . E 4 HOH A 50 550 206 HOH HOH . E 4 HOH A 51 551 10 HOH HOH . E 4 HOH A 52 552 63 HOH HOH . E 4 HOH A 53 553 336 HOH HOH . E 4 HOH A 54 554 127 HOH HOH . E 4 HOH A 55 555 37 HOH HOH . E 4 HOH A 56 556 304 HOH HOH . E 4 HOH A 57 557 203 HOH HOH . E 4 HOH A 58 558 231 HOH HOH . E 4 HOH A 59 559 34 HOH HOH . E 4 HOH A 60 560 119 HOH HOH . E 4 HOH A 61 561 152 HOH HOH . E 4 HOH A 62 562 30 HOH HOH . E 4 HOH A 63 563 187 HOH HOH . E 4 HOH A 64 564 196 HOH HOH . E 4 HOH A 65 565 27 HOH HOH . E 4 HOH A 66 566 67 HOH HOH . E 4 HOH A 67 567 52 HOH HOH . E 4 HOH A 68 568 98 HOH HOH . E 4 HOH A 69 569 182 HOH HOH . E 4 HOH A 70 570 99 HOH HOH . E 4 HOH A 71 571 130 HOH HOH . E 4 HOH A 72 572 143 HOH HOH . E 4 HOH A 73 573 125 HOH HOH . E 4 HOH A 74 574 338 HOH HOH . E 4 HOH A 75 575 214 HOH HOH . E 4 HOH A 76 576 155 HOH HOH . E 4 HOH A 77 577 90 HOH HOH . E 4 HOH A 78 578 124 HOH HOH . E 4 HOH A 79 579 344 HOH HOH . E 4 HOH A 80 580 66 HOH HOH . E 4 HOH A 81 581 48 HOH HOH . E 4 HOH A 82 582 211 HOH HOH . E 4 HOH A 83 583 349 HOH HOH . E 4 HOH A 84 584 96 HOH HOH . E 4 HOH A 85 585 283 HOH HOH . E 4 HOH A 86 586 78 HOH HOH . E 4 HOH A 87 587 93 HOH HOH . E 4 HOH A 88 588 296 HOH HOH . E 4 HOH A 89 589 64 HOH HOH . E 4 HOH A 90 590 73 HOH HOH . E 4 HOH A 91 591 259 HOH HOH . E 4 HOH A 92 592 7 HOH HOH . E 4 HOH A 93 593 157 HOH HOH . E 4 HOH A 94 594 70 HOH HOH . E 4 HOH A 95 595 11 HOH HOH . E 4 HOH A 96 596 343 HOH HOH . E 4 HOH A 97 597 22 HOH HOH . E 4 HOH A 98 598 16 HOH HOH . E 4 HOH A 99 599 295 HOH HOH . E 4 HOH A 100 600 250 HOH HOH . E 4 HOH A 101 601 19 HOH HOH . E 4 HOH A 102 602 342 HOH HOH . E 4 HOH A 103 603 9 HOH HOH . E 4 HOH A 104 604 33 HOH HOH . E 4 HOH A 105 605 116 HOH HOH . E 4 HOH A 106 606 6 HOH HOH . E 4 HOH A 107 607 332 HOH HOH . E 4 HOH A 108 608 176 HOH HOH . E 4 HOH A 109 609 181 HOH HOH . E 4 HOH A 110 610 191 HOH HOH . E 4 HOH A 111 611 101 HOH HOH . E 4 HOH A 112 612 328 HOH HOH . E 4 HOH A 113 613 2 HOH HOH . E 4 HOH A 114 614 220 HOH HOH . E 4 HOH A 115 615 97 HOH HOH . E 4 HOH A 116 616 41 HOH HOH . E 4 HOH A 117 617 297 HOH HOH . E 4 HOH A 118 618 131 HOH HOH . E 4 HOH A 119 619 165 HOH HOH . E 4 HOH A 120 620 105 HOH HOH . E 4 HOH A 121 621 146 HOH HOH . E 4 HOH A 122 622 44 HOH HOH . E 4 HOH A 123 623 166 HOH HOH . E 4 HOH A 124 624 351 HOH HOH . E 4 HOH A 125 625 137 HOH HOH . E 4 HOH A 126 626 169 HOH HOH . E 4 HOH A 127 627 188 HOH HOH . E 4 HOH A 128 628 56 HOH HOH . E 4 HOH A 129 629 29 HOH HOH . E 4 HOH A 130 630 167 HOH HOH . E 4 HOH A 131 631 158 HOH HOH . E 4 HOH A 132 632 136 HOH HOH . E 4 HOH A 133 633 49 HOH HOH . E 4 HOH A 134 634 229 HOH HOH . E 4 HOH A 135 635 251 HOH HOH . E 4 HOH A 136 636 132 HOH HOH . E 4 HOH A 137 637 74 HOH HOH . E 4 HOH A 138 638 72 HOH HOH . E 4 HOH A 139 639 55 HOH HOH . E 4 HOH A 140 640 340 HOH HOH . E 4 HOH A 141 641 174 HOH HOH . E 4 HOH A 142 642 140 HOH HOH . E 4 HOH A 143 643 103 HOH HOH . E 4 HOH A 144 644 71 HOH HOH . E 4 HOH A 145 645 94 HOH HOH . E 4 HOH A 146 646 205 HOH HOH . E 4 HOH A 147 647 82 HOH HOH . E 4 HOH A 148 648 85 HOH HOH . E 4 HOH A 149 649 179 HOH HOH . E 4 HOH A 150 650 76 HOH HOH . E 4 HOH A 151 651 314 HOH HOH . E 4 HOH A 152 652 217 HOH HOH . E 4 HOH A 153 653 95 HOH HOH . E 4 HOH A 154 654 225 HOH HOH . E 4 HOH A 155 655 12 HOH HOH . E 4 HOH A 156 656 303 HOH HOH . E 4 HOH A 157 657 293 HOH HOH . E 4 HOH A 158 658 326 HOH HOH . E 4 HOH A 159 659 294 HOH HOH . E 4 HOH A 160 660 279 HOH HOH . E 4 HOH A 161 661 46 HOH HOH . E 4 HOH A 162 662 18 HOH HOH . E 4 HOH A 163 663 122 HOH HOH . E 4 HOH A 164 664 212 HOH HOH . E 4 HOH A 165 665 227 HOH HOH . E 4 HOH A 166 666 43 HOH HOH . E 4 HOH A 167 667 92 HOH HOH . E 4 HOH A 168 668 337 HOH HOH . E 4 HOH A 169 669 281 HOH HOH . E 4 HOH A 170 670 87 HOH HOH . E 4 HOH A 171 671 102 HOH HOH . E 4 HOH A 172 672 257 HOH HOH . E 4 HOH A 173 673 193 HOH HOH . E 4 HOH A 174 674 80 HOH HOH . E 4 HOH A 175 675 115 HOH HOH . E 4 HOH A 176 676 117 HOH HOH . E 4 HOH A 177 677 149 HOH HOH . E 4 HOH A 178 678 89 HOH HOH . E 4 HOH A 179 679 267 HOH HOH . E 4 HOH A 180 680 91 HOH HOH . E 4 HOH A 181 681 350 HOH HOH . E 4 HOH A 182 682 224 HOH HOH . E 4 HOH A 183 683 200 HOH HOH . E 4 HOH A 184 684 315 HOH HOH . E 4 HOH A 185 685 185 HOH HOH . E 4 HOH A 186 686 31 HOH HOH . E 4 HOH A 187 687 126 HOH HOH . E 4 HOH A 188 688 189 HOH HOH . E 4 HOH A 189 689 83 HOH HOH . E 4 HOH A 190 690 299 HOH HOH . E 4 HOH A 191 691 274 HOH HOH . E 4 HOH A 192 692 346 HOH HOH . E 4 HOH A 193 693 24 HOH HOH . E 4 HOH A 194 694 135 HOH HOH . E 4 HOH A 195 695 230 HOH HOH . E 4 HOH A 196 696 180 HOH HOH . E 4 HOH A 197 697 183 HOH HOH . E 4 HOH A 198 698 184 HOH HOH . E 4 HOH A 199 699 247 HOH HOH . E 4 HOH A 200 700 195 HOH HOH . E 4 HOH A 201 701 128 HOH HOH . E 4 HOH A 202 702 198 HOH HOH . E 4 HOH A 203 703 260 HOH HOH . E 4 HOH A 204 704 186 HOH HOH . E 4 HOH A 205 705 42 HOH HOH . E 4 HOH A 206 706 100 HOH HOH . E 4 HOH A 207 707 150 HOH HOH . E 4 HOH A 208 708 319 HOH HOH . E 4 HOH A 209 709 290 HOH HOH . E 4 HOH A 210 710 168 HOH HOH . E 4 HOH A 211 711 271 HOH HOH . E 4 HOH A 212 712 241 HOH HOH . E 4 HOH A 213 713 69 HOH HOH . E 4 HOH A 214 714 112 HOH HOH . E 4 HOH A 215 715 339 HOH HOH . E 4 HOH A 216 716 258 HOH HOH . E 4 HOH A 217 717 277 HOH HOH . E 4 HOH A 218 718 265 HOH HOH . E 4 HOH A 219 719 219 HOH HOH . E 4 HOH A 220 720 147 HOH HOH . E 4 HOH A 221 721 109 HOH HOH . E 4 HOH A 222 722 173 HOH HOH . E 4 HOH A 223 723 210 HOH HOH . E 4 HOH A 224 724 347 HOH HOH . E 4 HOH A 225 725 335 HOH HOH . E 4 HOH A 226 726 68 HOH HOH . E 4 HOH A 227 727 190 HOH HOH . E 4 HOH A 228 728 262 HOH HOH . E 4 HOH A 229 729 282 HOH HOH . E 4 HOH A 230 730 264 HOH HOH . E 4 HOH A 231 731 245 HOH HOH . E 4 HOH A 232 732 334 HOH HOH . E 4 HOH A 233 733 263 HOH HOH . E 4 HOH A 234 734 311 HOH HOH . E 4 HOH A 235 735 215 HOH HOH . E 4 HOH A 236 736 273 HOH HOH . E 4 HOH A 237 737 201 HOH HOH . E 4 HOH A 238 738 163 HOH HOH . E 4 HOH A 239 739 154 HOH HOH . E 4 HOH A 240 740 129 HOH HOH . E 4 HOH A 241 741 213 HOH HOH . E 4 HOH A 242 742 276 HOH HOH . E 4 HOH A 243 743 118 HOH HOH . E 4 HOH A 244 744 324 HOH HOH . E 4 HOH A 245 745 204 HOH HOH . E 4 HOH A 246 746 317 HOH HOH . E 4 HOH A 247 747 209 HOH HOH . E 4 HOH A 248 748 222 HOH HOH . E 4 HOH A 249 749 252 HOH HOH . E 4 HOH A 250 750 162 HOH HOH . E 4 HOH A 251 751 266 HOH HOH . E 4 HOH A 252 752 108 HOH HOH . E 4 HOH A 253 753 300 HOH HOH . E 4 HOH A 254 754 308 HOH HOH . E 4 HOH A 255 755 106 HOH HOH . E 4 HOH A 256 756 177 HOH HOH . E 4 HOH A 257 757 160 HOH HOH . E 4 HOH A 258 758 287 HOH HOH . E 4 HOH A 259 759 268 HOH HOH . E 4 HOH A 260 760 81 HOH HOH . E 4 HOH A 261 761 175 HOH HOH . E 4 HOH A 262 762 141 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.372 _atom_site.Cartn_y 9.857 _atom_site.Cartn_z -10.143 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.44 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 402 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 370 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #