data_5ZR2 # _model_server_result.job_id 2kYjo2ebjZuZ9pgHtJWURQ _model_server_result.datetime_utc '2024-11-12 21:23:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zr2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":301}' # _entry.id 5ZR2 # _exptl.entry_id 5ZR2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 185.072 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHOSERINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ZR2 _cell.length_a 95.107 _cell.length_b 111.737 _cell.length_c 178.246 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZR2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,M,N 1 1 C,J,K,O 2 1 D,L,P 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x+1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 47.5535 55.8685 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 J N N ? 2 L N N # _chem_comp.formula 'C3 H8 N O6 P' _chem_comp.formula_weight 185.072 _chem_comp.id SEP _chem_comp.mon_nstd_flag n _chem_comp.name PHOSPHOSERINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms PHOSPHONOSERINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA SEP sing 323 n n N H SEP sing 324 n n N H2 SEP sing 325 n n CA CB SEP sing 326 n n CA C SEP sing 327 n n CA HA SEP sing 328 n n CB OG SEP sing 329 n n CB HB2 SEP sing 330 n n CB HB3 SEP sing 331 n n OG P SEP sing 332 n n C O SEP doub 333 n n C OXT SEP sing 334 n n OXT HXT SEP sing 335 n n P O1P SEP doub 336 n n P O2P SEP sing 337 n n P O3P SEP sing 338 n n O2P HOP2 SEP sing 339 n n O3P HOP3 SEP sing 340 n n # _atom_sites.entry_id 5ZR2 _atom_sites.fract_transf_matrix[1][1] 0.010514 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00895 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00561 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SEP A 1 301 2 SEP SEP . F 3 SO4 A 1 302 1 SO4 SO4 . G 4 PG4 A 1 303 1 PG4 PG4 . H 2 SEP B 1 301 3 SEP SEP . I 5 PEG B 1 302 3 PEG PEG . J 2 SEP C 1 301 4 SEP SEP . K 3 SO4 C 1 302 2 SO4 SO4 . L 2 SEP D 1 301 1 SEP SEP . M 6 HOH A 1 401 12 HOH HOH . M 6 HOH A 2 402 17 HOH HOH . M 6 HOH A 3 403 32 HOH HOH . M 6 HOH A 4 404 1 HOH HOH . M 6 HOH A 5 405 2 HOH HOH . M 6 HOH A 6 406 19 HOH HOH . M 6 HOH A 7 407 33 HOH HOH . M 6 HOH A 8 408 35 HOH HOH . M 6 HOH A 9 409 22 HOH HOH . M 6 HOH A 10 410 28 HOH HOH . N 6 HOH B 1 401 9 HOH HOH . N 6 HOH B 2 402 3 HOH HOH . N 6 HOH B 3 403 23 HOH HOH . N 6 HOH B 4 404 11 HOH HOH . N 6 HOH B 5 405 4 HOH HOH . N 6 HOH B 6 406 29 HOH HOH . O 6 HOH C 1 401 7 HOH HOH . O 6 HOH C 2 402 25 HOH HOH . O 6 HOH C 3 403 10 HOH HOH . O 6 HOH C 4 404 15 HOH HOH . O 6 HOH C 5 405 24 HOH HOH . O 6 HOH C 6 406 6 HOH HOH . P 6 HOH D 1 401 16 HOH HOH . P 6 HOH D 2 402 14 HOH HOH . P 6 HOH D 3 403 30 HOH HOH . P 6 HOH D 4 404 5 HOH HOH . P 6 HOH D 5 405 31 HOH HOH . P 6 HOH D 6 406 27 HOH HOH . P 6 HOH D 7 407 20 HOH HOH . P 6 HOH D 8 408 18 HOH HOH . P 6 HOH D 9 409 13 HOH HOH . P 6 HOH D 10 410 21 HOH HOH . P 6 HOH D 11 411 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N SEP . . . L 2 -60.209 -16.135 7.428 1 71.37 ? N SEP 301 D 1 HETATM 2 C CA SEP . . . L 2 -60.05 -15.42 6.117 1 70.36 ? CA SEP 301 D 1 HETATM 3 C CB SEP . . . L 2 -61.387 -15.381 5.376 1 70.95 ? CB SEP 301 D 1 HETATM 4 O OG SEP . . . L 2 -61.291 -14.73 4.107 1 70.05 ? OG SEP 301 D 1 HETATM 5 C C SEP . . . L 2 -59.53 -14.029 6.338 1 68.49 ? C SEP 301 D 1 HETATM 6 O O SEP . . . L 2 -58.615 -13.597 5.644 1 67.27 ? O SEP 301 D 1 HETATM 7 O OXT SEP . . . L 2 -59.994 -13.295 7.212 1 66.46 ? OXT SEP 301 D 1 HETATM 8 P P SEP . . . L 2 -62.567 -13.942 3.504 1 69.01 ? P SEP 301 D 1 HETATM 9 O O1P SEP . . . L 2 -62.346 -13.908 2.007 1 71.41 ? O1P SEP 301 D 1 HETATM 10 O O2P SEP . . . L 2 -62.466 -12.603 4.195 1 66.81 ? O2P SEP 301 D 1 HETATM 11 O O3P SEP . . . L 2 -63.763 -14.781 3.885 1 69.48 ? O3P SEP 301 D 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 379 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #