data_5ZRM # _model_server_result.job_id d1bHyd1VAdbF2j2pmhHSbw _model_server_result.datetime_utc '2024-10-20 20:50:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zrm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 5ZRM # _exptl.entry_id 5ZRM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ZRM _cell.length_a 82.421 _cell.length_b 82.971 _cell.length_c 103.841 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZRM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ARG 9 C ARG 10 1_555 B N NEP 10 C NEP 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 B C NEP 10 C NEP 11 1_555 B N GLY 11 C GLY 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5ZRM _atom_sites.fract_transf_matrix[1][1] 0.012133 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012052 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00963 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL B 1 301 1 CL CL . D 4 MES C 1 301 303 MES MES . E 5 9HU C 1 302 1 9HU AC1 . F 6 HOH B 1 401 100 HOH HOH . F 6 HOH B 2 402 106 HOH HOH . F 6 HOH B 3 403 3 HOH HOH . F 6 HOH B 4 404 42 HOH HOH . F 6 HOH B 5 405 83 HOH HOH . F 6 HOH B 6 406 93 HOH HOH . F 6 HOH B 7 407 108 HOH HOH . F 6 HOH B 8 408 16 HOH HOH . F 6 HOH B 9 409 36 HOH HOH . F 6 HOH B 10 410 49 HOH HOH . F 6 HOH B 11 411 1 HOH HOH . F 6 HOH B 12 412 28 HOH HOH . F 6 HOH B 13 413 63 HOH HOH . F 6 HOH B 14 414 6 HOH HOH . F 6 HOH B 15 415 32 HOH HOH . F 6 HOH B 16 416 21 HOH HOH . F 6 HOH B 17 417 129 HOH HOH . F 6 HOH B 18 418 48 HOH HOH . F 6 HOH B 19 419 8 HOH HOH . F 6 HOH B 20 420 66 HOH HOH . F 6 HOH B 21 421 73 HOH HOH . F 6 HOH B 22 422 62 HOH HOH . F 6 HOH B 23 423 31 HOH HOH . F 6 HOH B 24 424 107 HOH HOH . F 6 HOH B 25 425 94 HOH HOH . F 6 HOH B 26 426 4 HOH HOH . F 6 HOH B 27 427 12 HOH HOH . F 6 HOH B 28 428 53 HOH HOH . F 6 HOH B 29 429 121 HOH HOH . F 6 HOH B 30 430 19 HOH HOH . F 6 HOH B 31 431 26 HOH HOH . F 6 HOH B 32 432 18 HOH HOH . F 6 HOH B 33 433 22 HOH HOH . F 6 HOH B 34 434 60 HOH HOH . F 6 HOH B 35 435 57 HOH HOH . F 6 HOH B 36 436 25 HOH HOH . F 6 HOH B 37 437 69 HOH HOH . F 6 HOH B 38 438 115 HOH HOH . F 6 HOH B 39 439 123 HOH HOH . F 6 HOH B 40 440 98 HOH HOH . F 6 HOH B 41 441 46 HOH HOH . F 6 HOH B 42 442 75 HOH HOH . F 6 HOH B 43 443 15 HOH HOH . F 6 HOH B 44 444 34 HOH HOH . F 6 HOH B 45 445 77 HOH HOH . F 6 HOH B 46 446 76 HOH HOH . F 6 HOH B 47 447 90 HOH HOH . F 6 HOH B 48 448 131 HOH HOH . F 6 HOH B 49 449 55 HOH HOH . F 6 HOH B 50 450 109 HOH HOH . F 6 HOH B 51 451 59 HOH HOH . F 6 HOH B 52 452 88 HOH HOH . F 6 HOH B 53 453 91 HOH HOH . F 6 HOH B 54 454 67 HOH HOH . F 6 HOH B 55 455 96 HOH HOH . F 6 HOH B 56 456 56 HOH HOH . F 6 HOH B 57 457 84 HOH HOH . F 6 HOH B 58 458 120 HOH HOH . F 6 HOH B 59 459 87 HOH HOH . F 6 HOH B 60 460 71 HOH HOH . F 6 HOH B 61 461 85 HOH HOH . F 6 HOH B 62 462 20 HOH HOH . F 6 HOH B 63 463 86 HOH HOH . F 6 HOH B 64 464 116 HOH HOH . F 6 HOH B 65 465 79 HOH HOH . F 6 HOH B 66 466 128 HOH HOH . G 6 HOH C 1 401 41 HOH HOH . G 6 HOH C 2 402 43 HOH HOH . G 6 HOH C 3 403 92 HOH HOH . G 6 HOH C 4 404 50 HOH HOH . G 6 HOH C 5 405 65 HOH HOH . G 6 HOH C 6 406 127 HOH HOH . G 6 HOH C 7 407 37 HOH HOH . G 6 HOH C 8 408 2 HOH HOH . G 6 HOH C 9 409 23 HOH HOH . G 6 HOH C 10 410 35 HOH HOH . G 6 HOH C 11 411 61 HOH HOH . G 6 HOH C 12 412 72 HOH HOH . G 6 HOH C 13 413 30 HOH HOH . G 6 HOH C 14 414 82 HOH HOH . G 6 HOH C 15 415 7 HOH HOH . G 6 HOH C 16 416 11 HOH HOH . G 6 HOH C 17 417 47 HOH HOH . G 6 HOH C 18 418 40 HOH HOH . G 6 HOH C 19 419 133 HOH HOH . G 6 HOH C 20 420 38 HOH HOH . G 6 HOH C 21 421 10 HOH HOH . G 6 HOH C 22 422 101 HOH HOH . G 6 HOH C 23 423 13 HOH HOH . G 6 HOH C 24 424 117 HOH HOH . G 6 HOH C 25 425 33 HOH HOH . G 6 HOH C 26 426 95 HOH HOH . G 6 HOH C 27 427 103 HOH HOH . G 6 HOH C 28 428 39 HOH HOH . G 6 HOH C 29 429 78 HOH HOH . G 6 HOH C 30 430 17 HOH HOH . G 6 HOH C 31 431 136 HOH HOH . G 6 HOH C 32 432 45 HOH HOH . G 6 HOH C 33 433 24 HOH HOH . G 6 HOH C 34 434 130 HOH HOH . G 6 HOH C 35 435 58 HOH HOH . G 6 HOH C 36 436 74 HOH HOH . G 6 HOH C 37 437 132 HOH HOH . G 6 HOH C 38 438 51 HOH HOH . G 6 HOH C 39 439 102 HOH HOH . G 6 HOH C 40 440 29 HOH HOH . G 6 HOH C 41 441 68 HOH HOH . G 6 HOH C 42 442 99 HOH HOH . G 6 HOH C 43 443 52 HOH HOH . G 6 HOH C 44 444 110 HOH HOH . G 6 HOH C 45 445 70 HOH HOH . G 6 HOH C 46 446 89 HOH HOH . G 6 HOH C 47 447 14 HOH HOH . G 6 HOH C 48 448 54 HOH HOH . G 6 HOH C 49 449 81 HOH HOH . G 6 HOH C 50 450 5 HOH HOH . G 6 HOH C 51 451 80 HOH HOH . G 6 HOH C 52 452 64 HOH HOH . G 6 HOH C 53 453 27 HOH HOH . G 6 HOH C 54 454 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . D 4 17.451 8.364 22.282 1 79.26 ? O1 MES 301 C 1 HETATM 2 C C2 MES . . . D 4 17.16 9.475 23.137 1 77.94 ? C2 MES 301 C 1 HETATM 3 C C3 MES . . . D 4 15.661 9.59 23.426 1 67.28 ? C3 MES 301 C 1 HETATM 4 N N4 MES . . . D 4 15.245 8.243 23.78 1 69.19 ? N4 MES 301 C 1 HETATM 5 C C5 MES . . . D 4 15.363 7.212 22.758 1 77.32 ? C5 MES 301 C 1 HETATM 6 C C6 MES . . . D 4 16.28 7.801 21.685 1 80.7 ? C6 MES 301 C 1 HETATM 7 C C7 MES . . . D 4 14.262 8.062 24.84 1 64.35 ? C7 MES 301 C 1 HETATM 8 C C8 MES . . . D 4 13.858 9.477 25.211 1 61.09 ? C8 MES 301 C 1 HETATM 9 S S MES . . . D 4 12.572 9.452 26.257 1 55.93 ? S MES 301 C 1 HETATM 10 O O1S MES . . . D 4 11.877 8.146 26.264 1 60.07 ? O1S MES 301 C 1 HETATM 11 O O2S MES . . . D 4 11.604 10.458 25.743 1 63.86 ? O2S MES 301 C 1 HETATM 12 O O3S MES . . . D 4 12.988 9.832 27.626 1 50.64 ? O3S MES 301 C 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 12 #