data_5ZS8 # _model_server_result.job_id ZVYQSHurzuoS-5i3J6gaew _model_server_result.datetime_utc '2024-10-20 20:54:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zs8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 5ZS8 # _exptl.entry_id 5ZS8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ZS8 _cell.length_a 78.743 _cell.length_b 83.101 _cell.length_c 100.368 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZS8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ARG 9 C ARG 10 1_555 B N NEP 10 C NEP 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 B C NEP 10 C NEP 11 1_555 B N GLY 11 C GLY 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 B C ASN 98 C ASN 99 1_555 B N ALY 99 C ALY 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale4 B C ALY 99 C ALY 100 1_555 B N ALA 100 C ALA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5ZS8 _atom_sites.fract_transf_matrix[1][1] 0.0127 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012034 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009963 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL B 1 301 1 CL CL . D 4 MES C 1 301 303 MES MES . E 5 9JF C 1 302 1 9JF UNK . F 6 HOH B 1 401 169 HOH HOH . F 6 HOH B 2 402 187 HOH HOH . F 6 HOH B 3 403 151 HOH HOH . F 6 HOH B 4 404 14 HOH HOH . F 6 HOH B 5 405 35 HOH HOH . F 6 HOH B 6 406 163 HOH HOH . F 6 HOH B 7 407 184 HOH HOH . F 6 HOH B 8 408 77 HOH HOH . F 6 HOH B 9 409 170 HOH HOH . F 6 HOH B 10 410 2 HOH HOH . F 6 HOH B 11 411 36 HOH HOH . F 6 HOH B 12 412 178 HOH HOH . F 6 HOH B 13 413 145 HOH HOH . F 6 HOH B 14 414 20 HOH HOH . F 6 HOH B 15 415 175 HOH HOH . F 6 HOH B 16 416 23 HOH HOH . F 6 HOH B 17 417 3 HOH HOH . F 6 HOH B 18 418 66 HOH HOH . F 6 HOH B 19 419 161 HOH HOH . F 6 HOH B 20 420 40 HOH HOH . F 6 HOH B 21 421 115 HOH HOH . F 6 HOH B 22 422 144 HOH HOH . F 6 HOH B 23 423 30 HOH HOH . F 6 HOH B 24 424 162 HOH HOH . F 6 HOH B 25 425 78 HOH HOH . F 6 HOH B 26 426 39 HOH HOH . F 6 HOH B 27 427 126 HOH HOH . F 6 HOH B 28 428 147 HOH HOH . F 6 HOH B 29 429 104 HOH HOH . F 6 HOH B 30 430 83 HOH HOH . F 6 HOH B 31 431 75 HOH HOH . F 6 HOH B 32 432 94 HOH HOH . F 6 HOH B 33 433 29 HOH HOH . F 6 HOH B 34 434 216 HOH HOH . F 6 HOH B 35 435 5 HOH HOH . F 6 HOH B 36 436 74 HOH HOH . F 6 HOH B 37 437 9 HOH HOH . F 6 HOH B 38 438 84 HOH HOH . F 6 HOH B 39 439 72 HOH HOH . F 6 HOH B 40 440 133 HOH HOH . F 6 HOH B 41 441 28 HOH HOH . F 6 HOH B 42 442 50 HOH HOH . F 6 HOH B 43 443 89 HOH HOH . F 6 HOH B 44 444 43 HOH HOH . F 6 HOH B 45 445 79 HOH HOH . F 6 HOH B 46 446 62 HOH HOH . F 6 HOH B 47 447 101 HOH HOH . F 6 HOH B 48 448 16 HOH HOH . F 6 HOH B 49 449 121 HOH HOH . F 6 HOH B 50 450 88 HOH HOH . F 6 HOH B 51 451 34 HOH HOH . F 6 HOH B 52 452 57 HOH HOH . F 6 HOH B 53 453 37 HOH HOH . F 6 HOH B 54 454 67 HOH HOH . F 6 HOH B 55 455 138 HOH HOH . F 6 HOH B 56 456 259 HOH HOH . F 6 HOH B 57 457 106 HOH HOH . F 6 HOH B 58 458 31 HOH HOH . F 6 HOH B 59 459 220 HOH HOH . F 6 HOH B 60 460 53 HOH HOH . F 6 HOH B 61 461 17 HOH HOH . F 6 HOH B 62 462 258 HOH HOH . F 6 HOH B 63 463 205 HOH HOH . F 6 HOH B 64 464 93 HOH HOH . F 6 HOH B 65 465 123 HOH HOH . F 6 HOH B 66 466 4 HOH HOH . F 6 HOH B 67 467 118 HOH HOH . F 6 HOH B 68 468 81 HOH HOH . F 6 HOH B 69 469 32 HOH HOH . F 6 HOH B 70 470 146 HOH HOH . F 6 HOH B 71 471 48 HOH HOH . F 6 HOH B 72 472 55 HOH HOH . F 6 HOH B 73 473 49 HOH HOH . F 6 HOH B 74 474 105 HOH HOH . F 6 HOH B 75 475 18 HOH HOH . F 6 HOH B 76 476 13 HOH HOH . F 6 HOH B 77 477 71 HOH HOH . F 6 HOH B 78 478 233 HOH HOH . F 6 HOH B 79 479 141 HOH HOH . F 6 HOH B 80 480 173 HOH HOH . F 6 HOH B 81 481 65 HOH HOH . F 6 HOH B 82 482 153 HOH HOH . F 6 HOH B 83 483 19 HOH HOH . F 6 HOH B 84 484 95 HOH HOH . F 6 HOH B 85 485 215 HOH HOH . F 6 HOH B 86 486 140 HOH HOH . F 6 HOH B 87 487 171 HOH HOH . F 6 HOH B 88 488 192 HOH HOH . F 6 HOH B 89 489 45 HOH HOH . F 6 HOH B 90 490 142 HOH HOH . F 6 HOH B 91 491 92 HOH HOH . F 6 HOH B 92 492 166 HOH HOH . F 6 HOH B 93 493 152 HOH HOH . F 6 HOH B 94 494 250 HOH HOH . F 6 HOH B 95 495 270 HOH HOH . F 6 HOH B 96 496 226 HOH HOH . F 6 HOH B 97 497 27 HOH HOH . F 6 HOH B 98 498 227 HOH HOH . F 6 HOH B 99 499 182 HOH HOH . F 6 HOH B 100 500 165 HOH HOH . F 6 HOH B 101 501 249 HOH HOH . F 6 HOH B 102 502 217 HOH HOH . F 6 HOH B 103 503 149 HOH HOH . F 6 HOH B 104 504 148 HOH HOH . F 6 HOH B 105 505 160 HOH HOH . F 6 HOH B 106 506 168 HOH HOH . F 6 HOH B 107 507 237 HOH HOH . F 6 HOH B 108 508 235 HOH HOH . F 6 HOH B 109 509 206 HOH HOH . F 6 HOH B 110 510 261 HOH HOH . F 6 HOH B 111 511 253 HOH HOH . F 6 HOH B 112 512 116 HOH HOH . F 6 HOH B 113 513 167 HOH HOH . F 6 HOH B 114 514 156 HOH HOH . F 6 HOH B 115 515 139 HOH HOH . F 6 HOH B 116 516 174 HOH HOH . F 6 HOH B 117 517 196 HOH HOH . F 6 HOH B 118 518 260 HOH HOH . F 6 HOH B 119 519 128 HOH HOH . F 6 HOH B 120 520 109 HOH HOH . F 6 HOH B 121 521 172 HOH HOH . F 6 HOH B 122 522 248 HOH HOH . F 6 HOH B 123 523 103 HOH HOH . F 6 HOH B 124 524 200 HOH HOH . F 6 HOH B 125 525 208 HOH HOH . F 6 HOH B 126 526 56 HOH HOH . F 6 HOH B 127 527 210 HOH HOH . F 6 HOH B 128 528 251 HOH HOH . G 6 HOH C 1 401 102 HOH HOH . G 6 HOH C 2 402 70 HOH HOH . G 6 HOH C 3 403 61 HOH HOH . G 6 HOH C 4 404 33 HOH HOH . G 6 HOH C 5 405 110 HOH HOH . G 6 HOH C 6 406 143 HOH HOH . G 6 HOH C 7 407 1 HOH HOH . G 6 HOH C 8 408 180 HOH HOH . G 6 HOH C 9 409 15 HOH HOH . G 6 HOH C 10 410 64 HOH HOH . G 6 HOH C 11 411 134 HOH HOH . G 6 HOH C 12 412 76 HOH HOH . G 6 HOH C 13 413 201 HOH HOH . G 6 HOH C 14 414 25 HOH HOH . G 6 HOH C 15 415 44 HOH HOH . G 6 HOH C 16 416 6 HOH HOH . G 6 HOH C 17 417 112 HOH HOH . G 6 HOH C 18 418 90 HOH HOH . G 6 HOH C 19 419 100 HOH HOH . G 6 HOH C 20 420 99 HOH HOH . G 6 HOH C 21 421 96 HOH HOH . G 6 HOH C 22 422 122 HOH HOH . G 6 HOH C 23 423 98 HOH HOH . G 6 HOH C 24 424 176 HOH HOH . G 6 HOH C 25 425 82 HOH HOH . G 6 HOH C 26 426 255 HOH HOH . G 6 HOH C 27 427 158 HOH HOH . G 6 HOH C 28 428 191 HOH HOH . G 6 HOH C 29 429 252 HOH HOH . G 6 HOH C 30 430 42 HOH HOH . G 6 HOH C 31 431 273 HOH HOH . G 6 HOH C 32 432 51 HOH HOH . G 6 HOH C 33 433 189 HOH HOH . G 6 HOH C 34 434 73 HOH HOH . G 6 HOH C 35 435 198 HOH HOH . G 6 HOH C 36 436 47 HOH HOH . G 6 HOH C 37 437 113 HOH HOH . G 6 HOH C 38 438 86 HOH HOH . G 6 HOH C 39 439 24 HOH HOH . G 6 HOH C 40 440 22 HOH HOH . G 6 HOH C 41 441 131 HOH HOH . G 6 HOH C 42 442 108 HOH HOH . G 6 HOH C 43 443 11 HOH HOH . G 6 HOH C 44 444 195 HOH HOH . G 6 HOH C 45 445 223 HOH HOH . G 6 HOH C 46 446 63 HOH HOH . G 6 HOH C 47 447 52 HOH HOH . G 6 HOH C 48 448 85 HOH HOH . G 6 HOH C 49 449 26 HOH HOH . G 6 HOH C 50 450 80 HOH HOH . G 6 HOH C 51 451 120 HOH HOH . G 6 HOH C 52 452 179 HOH HOH . G 6 HOH C 53 453 7 HOH HOH . G 6 HOH C 54 454 107 HOH HOH . G 6 HOH C 55 455 54 HOH HOH . G 6 HOH C 56 456 127 HOH HOH . G 6 HOH C 57 457 10 HOH HOH . G 6 HOH C 58 458 59 HOH HOH . G 6 HOH C 59 459 188 HOH HOH . G 6 HOH C 60 460 213 HOH HOH . G 6 HOH C 61 461 228 HOH HOH . G 6 HOH C 62 462 234 HOH HOH . G 6 HOH C 63 463 219 HOH HOH . G 6 HOH C 64 464 38 HOH HOH . G 6 HOH C 65 465 60 HOH HOH . G 6 HOH C 66 466 256 HOH HOH . G 6 HOH C 67 467 150 HOH HOH . G 6 HOH C 68 468 185 HOH HOH . G 6 HOH C 69 469 97 HOH HOH . G 6 HOH C 70 470 12 HOH HOH . G 6 HOH C 71 471 119 HOH HOH . G 6 HOH C 72 472 130 HOH HOH . G 6 HOH C 73 473 181 HOH HOH . G 6 HOH C 74 474 243 HOH HOH . G 6 HOH C 75 475 68 HOH HOH . G 6 HOH C 76 476 136 HOH HOH . G 6 HOH C 77 477 114 HOH HOH . G 6 HOH C 78 478 8 HOH HOH . G 6 HOH C 79 479 186 HOH HOH . G 6 HOH C 80 480 46 HOH HOH . G 6 HOH C 81 481 58 HOH HOH . G 6 HOH C 82 482 124 HOH HOH . G 6 HOH C 83 483 154 HOH HOH . G 6 HOH C 84 484 263 HOH HOH . G 6 HOH C 85 485 225 HOH HOH . G 6 HOH C 86 486 254 HOH HOH . G 6 HOH C 87 487 117 HOH HOH . G 6 HOH C 88 488 221 HOH HOH . G 6 HOH C 89 489 164 HOH HOH . G 6 HOH C 90 490 267 HOH HOH . G 6 HOH C 91 491 230 HOH HOH . G 6 HOH C 92 492 135 HOH HOH . G 6 HOH C 93 493 159 HOH HOH . G 6 HOH C 94 494 275 HOH HOH . G 6 HOH C 95 495 41 HOH HOH . G 6 HOH C 96 496 21 HOH HOH . G 6 HOH C 97 497 257 HOH HOH . G 6 HOH C 98 498 125 HOH HOH . G 6 HOH C 99 499 214 HOH HOH . G 6 HOH C 100 500 129 HOH HOH . G 6 HOH C 101 501 236 HOH HOH . G 6 HOH C 102 502 247 HOH HOH . G 6 HOH C 103 503 271 HOH HOH . G 6 HOH C 104 504 203 HOH HOH . G 6 HOH C 105 505 239 HOH HOH . G 6 HOH C 106 506 202 HOH HOH . G 6 HOH C 107 507 91 HOH HOH . G 6 HOH C 108 508 69 HOH HOH . G 6 HOH C 109 509 204 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . D 4 56.5 74.217 127.654 1 75.39 ? O1 MES 301 C 1 HETATM 2 C C2 MES . . . D 4 56.513 74.766 126.334 1 73.94 ? C2 MES 301 C 1 HETATM 3 C C3 MES . . . D 4 55.085 74.94 125.817 1 64.03 ? C3 MES 301 C 1 HETATM 4 N N4 MES . . . D 4 54.374 73.717 126.169 1 56.85 ? N4 MES 301 C 1 HETATM 5 C C5 MES . . . D 4 55.143 72.527 126.492 1 60.83 ? C5 MES 301 C 1 HETATM 6 C C6 MES . . . D 4 55.978 72.886 127.721 1 72.69 ? C6 MES 301 C 1 HETATM 7 C C7 MES . . . D 4 53.023 73.543 125.661 1 49.94 ? C7 MES 301 C 1 HETATM 8 C C8 MES . . . D 4 53.111 73.368 124.144 1 45.19 ? C8 MES 301 C 1 HETATM 9 S S MES . . . D 4 51.774 72.479 123.702 1 37.02 ? S MES 301 C 1 HETATM 10 O O1S MES . . . D 4 51.935 72.031 122.295 1 32.93 ? O1S MES 301 C 1 HETATM 11 O O2S MES . . . D 4 50.545 73.297 123.858 1 35.24 ? O2S MES 301 C 1 HETATM 12 O O3S MES . . . D 4 51.649 71.306 124.602 1 39.18 ? O3S MES 301 C 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #