data_5ZSN # _model_server_result.job_id 4pi9hRHRx4TmEOGNfffHcA _model_server_result.datetime_utc '2024-11-15 03:00:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zsn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":1019}' # _entry.id 5ZSN # _exptl.entry_id 5ZSN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 7 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ZSN _cell.length_a 98.448 _cell.length_b 139.391 _cell.length_c 149.579 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZSN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 P N N ? 7 Q N N ? 7 R N N ? 7 S N N ? 7 T N N ? 7 U N N ? 7 V N N ? 7 W N N ? 7 X N N ? 7 Y N N ? 7 DA N N ? 7 EA N N ? 7 FA N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 4 2 1 BMA NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n E NAG 1 C 1 NAG B 837 NAG 3 n E NAG 2 C 2 NAG B 838 NAG 4 n F NAG 1 F 1 NAG A 837 NAG 4 n F BMA 2 F 2 BMA A 838 BMA 3 n G NAG 1 G 1 NAG A 839 NAG 3 n G NAG 2 G 2 NAG A 840 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 14 B CYS 36 1_555 A SG CYS 29 B CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf2 A SG CYS 76 B CYS 98 1_555 A SG CYS 453 B CYS 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf3 A SG CYS 78 B CYS 100 1_555 A SG CYS 90 B CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf4 A SG CYS 161 B CYS 183 1_555 A SG CYS 167 B CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? disulf ? disulf5 A SG CYS 238 B CYS 260 1_555 A SG CYS 251 B CYS 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf6 A SG CYS 241 B CYS 263 1_555 A SG CYS 248 B CYS 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf7 A SG CYS 469 B CYS 491 1_555 A SG CYS 499 B CYS 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? disulf ? disulf8 A SG CYS 765 B CYS 787 1_555 A SG CYS 792 B CYS 814 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf9 A SG CYS 767 B CYS 789 1_555 A SG CYS 811 B CYS 833 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf10 B SG CYS 14 A CYS 36 1_555 B SG CYS 29 A CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf11 B SG CYS 76 A CYS 98 1_555 B SG CYS 453 A CYS 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf12 B SG CYS 78 A CYS 100 1_555 B SG CYS 90 A CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? disulf ? disulf13 B SG CYS 161 A CYS 183 1_555 B SG CYS 167 A CYS 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? disulf ? disulf14 B SG CYS 238 A CYS 260 1_555 B SG CYS 251 A CYS 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf15 B SG CYS 241 A CYS 263 1_555 B SG CYS 248 A CYS 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf16 B SG CYS 469 A CYS 491 1_555 B SG CYS 499 A CYS 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf17 B SG CYS 765 A CYS 787 1_555 B SG CYS 792 A CYS 814 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf18 B SG CYS 767 A CYS 789 1_555 B SG CYS 811 A CYS 833 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? covale ? covale1 A ND2 ASN 47 B ASN 69 1_555 M C1 NAG . B NAG 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale2 A ND2 ASN 193 B ASN 215 1_555 E C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale3 A ND2 ASN 339 B ASN 361 1_555 N C1 NAG . B NAG 1009 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale4 A ND2 ASN 391 B ASN 413 1_555 J C1 NAG . B NAG 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.423 ? covale ? covale5 A ND2 ASN 501 B ASN 523 1_555 H C1 NAG . B NAG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? covale ? covale6 A ND2 ASN 568 B ASN 590 1_555 I C1 NAG . B NAG 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? covale ? covale7 A ND2 ASN 657 B ASN 679 1_555 L C1 NAG . B NAG 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale8 A ND2 ASN 698 B ASN 720 1_555 K C1 NAG . B NAG 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.469 ? covale ? covale9 B ND2 ASN 47 A ASN 69 1_555 G C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale10 B ND2 ASN 193 A ASN 215 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale11 B ND2 ASN 501 A ASN 523 1_555 AA C1 NAG . A NAG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale12 B ND2 ASN 568 A ASN 590 1_555 BA C1 NAG . A NAG 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale13 E O4 NAG . C NAG 1 1_555 E C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.425 ? covale ? covale14 F O4 NAG . F NAG 1 1_555 F C1 BMA . F BMA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale15 G O4 NAG . G NAG 1 1_555 G C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 424 n n S O2 SO4 doub 425 n n S O3 SO4 sing 426 n n S O4 SO4 sing 427 n n # _atom_sites.entry_id 5ZSN _atom_sites.fract_transf_matrix[1][1] 0.010158 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007174 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006685 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 5 NAG B 1 1001 836 NAG NAG . I 5 NAG B 1 1004 839 NAG NAG . J 5 NAG B 1 1005 840 NAG NAG . K 5 NAG B 1 1006 841 NAG NAG . L 5 NAG B 1 1007 842 NAG NAG . M 5 NAG B 1 1008 843 NAG NAG . N 5 NAG B 1 1009 844 NAG NAG . O 6 PO4 B 1 1010 2 PO4 PO4 . P 7 SO4 B 1 1011 1 SO4 SO4 . Q 7 SO4 B 1 1012 3 SO4 SO4 . R 7 SO4 B 1 1013 4 SO4 SO4 . S 7 SO4 B 1 1014 5 SO4 SO4 . T 7 SO4 B 1 1015 6 SO4 SO4 . U 7 SO4 B 1 1016 8 SO4 SO4 . V 7 SO4 B 1 1017 9 SO4 SO4 . W 7 SO4 B 1 1018 10 SO4 SO4 . X 7 SO4 B 1 1019 11 SO4 SO4 . Y 7 SO4 B 1 1020 12 SO4 SO4 . Z 8 ACK B 1 1021 1 ACK sdf . AA 5 NAG A 1 1001 836 NAG NAG . BA 5 NAG A 1 1006 841 NAG NAG . CA 6 PO4 A 1 1007 1 PO4 PO4 . DA 7 SO4 A 1 1008 2 SO4 SO4 . EA 7 SO4 A 1 1009 7 SO4 SO4 . FA 7 SO4 A 1 1010 13 SO4 SO4 . GA 8 ACK A 1 1011 2 ACK sdf . HA 9 HOH B 1 1101 28 HOH HOH . HA 9 HOH B 2 1102 3 HOH HOH . HA 9 HOH B 3 1103 17 HOH HOH . HA 9 HOH B 4 1104 46 HOH HOH . HA 9 HOH B 5 1105 6 HOH HOH . HA 9 HOH B 6 1106 34 HOH HOH . HA 9 HOH B 7 1107 45 HOH HOH . HA 9 HOH B 8 1108 33 HOH HOH . HA 9 HOH B 9 1109 5 HOH HOH . HA 9 HOH B 10 1110 19 HOH HOH . HA 9 HOH B 11 1111 25 HOH HOH . HA 9 HOH B 12 1112 21 HOH HOH . HA 9 HOH B 13 1113 50 HOH HOH . HA 9 HOH B 14 1114 40 HOH HOH . HA 9 HOH B 15 1115 27 HOH HOH . HA 9 HOH B 16 1116 1 HOH HOH . HA 9 HOH B 17 1117 22 HOH HOH . HA 9 HOH B 18 1118 18 HOH HOH . HA 9 HOH B 19 1119 47 HOH HOH . HA 9 HOH B 20 1120 24 HOH HOH . HA 9 HOH B 21 1121 15 HOH HOH . HA 9 HOH B 22 1122 16 HOH HOH . HA 9 HOH B 23 1123 56 HOH HOH . HA 9 HOH B 24 1124 44 HOH HOH . HA 9 HOH B 25 1125 58 HOH HOH . HA 9 HOH B 26 1126 59 HOH HOH . HA 9 HOH B 27 1127 53 HOH HOH . HA 9 HOH B 28 1128 26 HOH HOH . HA 9 HOH B 29 1129 8 HOH HOH . HA 9 HOH B 30 1130 39 HOH HOH . HA 9 HOH B 31 1131 48 HOH HOH . HA 9 HOH B 32 1132 38 HOH HOH . HA 9 HOH B 33 1133 52 HOH HOH . IA 9 HOH A 1 1101 42 HOH HOH . IA 9 HOH A 2 1102 60 HOH HOH . IA 9 HOH A 3 1103 12 HOH HOH . IA 9 HOH A 4 1104 36 HOH HOH . IA 9 HOH A 5 1105 32 HOH HOH . IA 9 HOH A 6 1106 55 HOH HOH . IA 9 HOH A 7 1107 4 HOH HOH . IA 9 HOH A 8 1108 2 HOH HOH . IA 9 HOH A 9 1109 57 HOH HOH . IA 9 HOH A 10 1110 9 HOH HOH . IA 9 HOH A 11 1111 41 HOH HOH . IA 9 HOH A 12 1112 35 HOH HOH . IA 9 HOH A 13 1113 31 HOH HOH . IA 9 HOH A 14 1114 10 HOH HOH . IA 9 HOH A 15 1115 13 HOH HOH . IA 9 HOH A 16 1116 7 HOH HOH . IA 9 HOH A 17 1117 37 HOH HOH . IA 9 HOH A 18 1118 43 HOH HOH . IA 9 HOH A 19 1119 51 HOH HOH . IA 9 HOH A 20 1120 20 HOH HOH . IA 9 HOH A 21 1121 29 HOH HOH . IA 9 HOH A 22 1122 23 HOH HOH . IA 9 HOH A 23 1123 54 HOH HOH . IA 9 HOH A 24 1124 14 HOH HOH . IA 9 HOH A 25 1125 30 HOH HOH . IA 9 HOH A 26 1126 11 HOH HOH . IA 9 HOH A 27 1127 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . X 7 25.76 -1.843 -32.671 1 112.89 ? S SO4 1019 B 1 HETATM 2 O O1 SO4 . . . X 7 25.666 -1.559 -34.131 1 107.31 ? O1 SO4 1019 B 1 HETATM 3 O O2 SO4 . . . X 7 27.07 -2.566 -32.43 1 89.58 ? O2 SO4 1019 B 1 HETATM 4 O O3 SO4 . . . X 7 24.489 -2.523 -32.247 1 89.18 ? O3 SO4 1019 B 1 HETATM 5 O O4 SO4 . . . X 7 25.785 -0.572 -31.918 1 101.62 ? O4 SO4 1019 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #