data_5ZT2 # _model_server_result.job_id 5gPPizU2Og3Vp80EjSB_OQ _model_server_result.datetime_utc '2024-10-19 19:17:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zt2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 5ZT2 # _exptl.entry_id 5ZT2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ZT2 _cell.length_a 38.299 _cell.length_b 38.299 _cell.length_c 54.328 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZT2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 27.164 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A N7 DG 4 A DG 4 1_555 B CO CO . A CO 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc2 A N7 DG 7 A DG 7 1_555 C CO CO . A CO 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc3 B CO CO . A CO 101 1_555 D O HOH . A HOH 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc4 B CO CO . A CO 101 1_555 D O HOH . A HOH 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? metalc ? metalc5 B CO CO . A CO 101 1_555 D O HOH . A HOH 228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc6 C CO CO . A CO 102 1_555 D O HOH . A HOH 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? hydrog TYPE_15_PAIR hydrog1 A N4 DC 2 A DC 2 1_555 A O2 DC 2 A DC 2 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_15_PAIR hydrog2 A O2 DC 2 A DC 2 1_555 A N4 DC 2 A DC 2 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_15_PAIR hydrog3 A N4 DC 3 A DC 3 1_555 A O2 DC 3 A DC 3 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_15_PAIR hydrog4 A O2 DC 3 A DC 3 1_555 A N4 DC 3 A DC 3 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_4_PAIR hydrog5 A N2 DG 4 A DG 4 1_555 A N3 DG 4 A DG 4 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_4_PAIR hydrog6 A N3 DG 4 A DG 4 1_555 A N2 DG 4 A DG 4 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_15_PAIR hydrog7 A N4 DC 8 A DC 8 1_555 A O2 DC 8 A DC 8 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_15_PAIR hydrog8 A O2 DC 8 A DC 8 1_555 A N4 DC 8 A DC 8 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_15_PAIR hydrog9 A N4 DC 9 A DC 9 1_555 A O2 DC 9 A DC 9 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_15_PAIR hydrog10 A O2 DC 9 A DC 9 1_555 A N4 DC 9 A DC 9 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_4_PAIR hydrog11 A N2 DG 10 A DG 10 1_555 A N3 DG 10 A DG 10 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_4_PAIR hydrog12 A N3 DG 10 A DG 10 1_555 A N2 DG 10 A DG 10 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_2_PAIR hydrog13 A N6 DA 11 A DA 11 1_555 A N7 DA 11 A DA 11 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_2_PAIR hydrog14 A N7 DA 11 A DA 11 1_555 A N6 DA 11 A DA 11 8_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5ZT2 _atom_sites.fract_transf_matrix[1][1] 0.02611 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02611 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018407 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 101 5 CO CO . C 2 CO A 1 102 6 CO CO . D 3 HOH A 1 201 9 HOH HOH . D 3 HOH A 2 202 10 HOH HOH . D 3 HOH A 3 203 12 HOH HOH . D 3 HOH A 4 204 6 HOH HOH . D 3 HOH A 5 205 5 HOH HOH . D 3 HOH A 6 206 25 HOH HOH . D 3 HOH A 7 207 4 HOH HOH . D 3 HOH A 8 208 11 HOH HOH . D 3 HOH A 9 209 2 HOH HOH . D 3 HOH A 10 210 36 HOH HOH . D 3 HOH A 11 211 7 HOH HOH . D 3 HOH A 12 212 13 HOH HOH . D 3 HOH A 13 213 33 HOH HOH . D 3 HOH A 14 214 18 HOH HOH . D 3 HOH A 15 215 8 HOH HOH . D 3 HOH A 16 216 59 HOH HOH . D 3 HOH A 17 217 3 HOH HOH . D 3 HOH A 18 218 1 HOH HOH . D 3 HOH A 19 219 19 HOH HOH . D 3 HOH A 20 220 40 HOH HOH . D 3 HOH A 21 221 52 HOH HOH . D 3 HOH A 22 222 35 HOH HOH . D 3 HOH A 23 223 16 HOH HOH . D 3 HOH A 24 224 24 HOH HOH . D 3 HOH A 25 225 15 HOH HOH . D 3 HOH A 26 226 30 HOH HOH . D 3 HOH A 27 227 31 HOH HOH . D 3 HOH A 28 228 23 HOH HOH . D 3 HOH A 29 229 32 HOH HOH . D 3 HOH A 30 230 49 HOH HOH . D 3 HOH A 31 231 20 HOH HOH . D 3 HOH A 32 232 50 HOH HOH . D 3 HOH A 33 233 27 HOH HOH . D 3 HOH A 34 234 34 HOH HOH . D 3 HOH A 35 235 21 HOH HOH . D 3 HOH A 36 236 47 HOH HOH . D 3 HOH A 37 237 41 HOH HOH . D 3 HOH A 38 238 17 HOH HOH . D 3 HOH A 39 239 14 HOH HOH . D 3 HOH A 40 240 48 HOH HOH . D 3 HOH A 41 241 56 HOH HOH . D 3 HOH A 42 242 43 HOH HOH . D 3 HOH A 43 243 39 HOH HOH . D 3 HOH A 44 244 54 HOH HOH . D 3 HOH A 45 245 46 HOH HOH . D 3 HOH A 46 246 38 HOH HOH . D 3 HOH A 47 247 53 HOH HOH . D 3 HOH A 48 248 26 HOH HOH . D 3 HOH A 49 249 44 HOH HOH . D 3 HOH A 50 250 58 HOH HOH . D 3 HOH A 51 251 28 HOH HOH . D 3 HOH A 52 252 42 HOH HOH . D 3 HOH A 53 253 57 HOH HOH . D 3 HOH A 54 254 29 HOH HOH . D 3 HOH A 55 255 45 HOH HOH . D 3 HOH A 56 256 55 HOH HOH . D 3 HOH A 57 257 22 HOH HOH . D 3 HOH A 58 258 51 HOH HOH . D 3 HOH A 59 259 37 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -4.951 _atom_site.Cartn_y 4.78 _atom_site.Cartn_z 3.665 _atom_site.occupancy 0.57 _atom_site.B_iso_or_equiv 32.24 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 102 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #