data_5ZT5 # _model_server_result.job_id m3xlE011tNTdexcnxQHG1Q _model_server_result.datetime_utc '2024-10-20 03:50:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zt5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5ZT5 # _exptl.entry_id 5ZT5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ZT5 _cell.length_a 36.23 _cell.length_b 91.97 _cell.length_c 116.79 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZT5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 5ZT5 _atom_sites.fract_transf_matrix[1][1] 0.027601 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010873 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008562 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 401 1 EDO EDO . C 2 EDO A 1 402 2 EDO EDO . D 2 EDO A 1 403 3 EDO EDO . E 2 EDO A 1 404 4 EDO EDO . F 2 EDO A 1 405 6 EDO EDO . G 3 HOH A 1 501 206 HOH HOH . G 3 HOH A 2 502 275 HOH HOH . G 3 HOH A 3 503 253 HOH HOH . G 3 HOH A 4 504 270 HOH HOH . G 3 HOH A 5 505 312 HOH HOH . G 3 HOH A 6 506 280 HOH HOH . G 3 HOH A 7 507 229 HOH HOH . G 3 HOH A 8 508 98 HOH HOH . G 3 HOH A 9 509 161 HOH HOH . G 3 HOH A 10 510 340 HOH HOH . G 3 HOH A 11 511 281 HOH HOH . G 3 HOH A 12 512 218 HOH HOH . G 3 HOH A 13 513 59 HOH HOH . G 3 HOH A 14 514 237 HOH HOH . G 3 HOH A 15 515 79 HOH HOH . G 3 HOH A 16 516 73 HOH HOH . G 3 HOH A 17 517 242 HOH HOH . G 3 HOH A 18 518 268 HOH HOH . G 3 HOH A 19 519 334 HOH HOH . G 3 HOH A 20 520 50 HOH HOH . G 3 HOH A 21 521 151 HOH HOH . G 3 HOH A 22 522 211 HOH HOH . G 3 HOH A 23 523 61 HOH HOH . G 3 HOH A 24 524 105 HOH HOH . G 3 HOH A 25 525 56 HOH HOH . G 3 HOH A 26 526 45 HOH HOH . G 3 HOH A 27 527 67 HOH HOH . G 3 HOH A 28 528 344 HOH HOH . G 3 HOH A 29 529 115 HOH HOH . G 3 HOH A 30 530 42 HOH HOH . G 3 HOH A 31 531 223 HOH HOH . G 3 HOH A 32 532 140 HOH HOH . G 3 HOH A 33 533 68 HOH HOH . G 3 HOH A 34 534 83 HOH HOH . G 3 HOH A 35 535 132 HOH HOH . G 3 HOH A 36 536 82 HOH HOH . G 3 HOH A 37 537 57 HOH HOH . G 3 HOH A 38 538 341 HOH HOH . G 3 HOH A 39 539 258 HOH HOH . G 3 HOH A 40 540 122 HOH HOH . G 3 HOH A 41 541 343 HOH HOH . G 3 HOH A 42 542 235 HOH HOH . G 3 HOH A 43 543 234 HOH HOH . G 3 HOH A 44 544 60 HOH HOH . G 3 HOH A 45 545 250 HOH HOH . G 3 HOH A 46 546 107 HOH HOH . G 3 HOH A 47 547 26 HOH HOH . G 3 HOH A 48 548 7 HOH HOH . G 3 HOH A 49 549 221 HOH HOH . G 3 HOH A 50 550 263 HOH HOH . G 3 HOH A 51 551 62 HOH HOH . G 3 HOH A 52 552 240 HOH HOH . G 3 HOH A 53 553 35 HOH HOH . G 3 HOH A 54 554 93 HOH HOH . G 3 HOH A 55 555 214 HOH HOH . G 3 HOH A 56 556 279 HOH HOH . G 3 HOH A 57 557 88 HOH HOH . G 3 HOH A 58 558 320 HOH HOH . G 3 HOH A 59 559 317 HOH HOH . G 3 HOH A 60 560 16 HOH HOH . G 3 HOH A 61 561 97 HOH HOH . G 3 HOH A 62 562 20 HOH HOH . G 3 HOH A 63 563 264 HOH HOH . G 3 HOH A 64 564 225 HOH HOH . G 3 HOH A 65 565 46 HOH HOH . G 3 HOH A 66 566 29 HOH HOH . G 3 HOH A 67 567 15 HOH HOH . G 3 HOH A 68 568 143 HOH HOH . G 3 HOH A 69 569 21 HOH HOH . G 3 HOH A 70 570 291 HOH HOH . G 3 HOH A 71 571 126 HOH HOH . G 3 HOH A 72 572 131 HOH HOH . G 3 HOH A 73 573 226 HOH HOH . G 3 HOH A 74 574 220 HOH HOH . G 3 HOH A 75 575 246 HOH HOH . G 3 HOH A 76 576 230 HOH HOH . G 3 HOH A 77 577 24 HOH HOH . G 3 HOH A 78 578 189 HOH HOH . G 3 HOH A 79 579 116 HOH HOH . G 3 HOH A 80 580 102 HOH HOH . G 3 HOH A 81 581 170 HOH HOH . G 3 HOH A 82 582 10 HOH HOH . G 3 HOH A 83 583 33 HOH HOH . G 3 HOH A 84 584 321 HOH HOH . G 3 HOH A 85 585 272 HOH HOH . G 3 HOH A 86 586 141 HOH HOH . G 3 HOH A 87 587 95 HOH HOH . G 3 HOH A 88 588 169 HOH HOH . G 3 HOH A 89 589 12 HOH HOH . G 3 HOH A 90 590 129 HOH HOH . G 3 HOH A 91 591 114 HOH HOH . G 3 HOH A 92 592 121 HOH HOH . G 3 HOH A 93 593 177 HOH HOH . G 3 HOH A 94 594 8 HOH HOH . G 3 HOH A 95 595 239 HOH HOH . G 3 HOH A 96 596 145 HOH HOH . G 3 HOH A 97 597 283 HOH HOH . G 3 HOH A 98 598 40 HOH HOH . G 3 HOH A 99 599 31 HOH HOH . G 3 HOH A 100 600 84 HOH HOH . G 3 HOH A 101 601 76 HOH HOH . G 3 HOH A 102 602 184 HOH HOH . G 3 HOH A 103 603 290 HOH HOH . G 3 HOH A 104 604 342 HOH HOH . G 3 HOH A 105 605 245 HOH HOH . G 3 HOH A 106 606 159 HOH HOH . G 3 HOH A 107 607 44 HOH HOH . G 3 HOH A 108 608 43 HOH HOH . G 3 HOH A 109 609 293 HOH HOH . G 3 HOH A 110 610 66 HOH HOH . G 3 HOH A 111 611 65 HOH HOH . G 3 HOH A 112 612 236 HOH HOH . G 3 HOH A 113 613 308 HOH HOH . G 3 HOH A 114 614 100 HOH HOH . G 3 HOH A 115 615 156 HOH HOH . G 3 HOH A 116 616 77 HOH HOH . G 3 HOH A 117 617 130 HOH HOH . G 3 HOH A 118 618 123 HOH HOH . G 3 HOH A 119 619 111 HOH HOH . G 3 HOH A 120 620 150 HOH HOH . G 3 HOH A 121 621 201 HOH HOH . G 3 HOH A 122 622 34 HOH HOH . G 3 HOH A 123 623 244 HOH HOH . G 3 HOH A 124 624 147 HOH HOH . G 3 HOH A 125 625 336 HOH HOH . G 3 HOH A 126 626 139 HOH HOH . G 3 HOH A 127 627 92 HOH HOH . G 3 HOH A 128 628 339 HOH HOH . G 3 HOH A 129 629 158 HOH HOH . G 3 HOH A 130 630 63 HOH HOH . G 3 HOH A 131 631 48 HOH HOH . G 3 HOH A 132 632 165 HOH HOH . G 3 HOH A 133 633 86 HOH HOH . G 3 HOH A 134 634 91 HOH HOH . G 3 HOH A 135 635 110 HOH HOH . G 3 HOH A 136 636 94 HOH HOH . G 3 HOH A 137 637 69 HOH HOH . G 3 HOH A 138 638 23 HOH HOH . G 3 HOH A 139 639 81 HOH HOH . G 3 HOH A 140 640 5 HOH HOH . G 3 HOH A 141 641 96 HOH HOH . G 3 HOH A 142 642 328 HOH HOH . G 3 HOH A 143 643 208 HOH HOH . G 3 HOH A 144 644 117 HOH HOH . G 3 HOH A 145 645 49 HOH HOH . G 3 HOH A 146 646 297 HOH HOH . G 3 HOH A 147 647 210 HOH HOH . G 3 HOH A 148 648 71 HOH HOH . G 3 HOH A 149 649 37 HOH HOH . G 3 HOH A 150 650 168 HOH HOH . G 3 HOH A 151 651 39 HOH HOH . G 3 HOH A 152 652 41 HOH HOH . G 3 HOH A 153 653 85 HOH HOH . G 3 HOH A 154 654 144 HOH HOH . G 3 HOH A 155 655 243 HOH HOH . G 3 HOH A 156 656 324 HOH HOH . G 3 HOH A 157 657 13 HOH HOH . G 3 HOH A 158 658 254 HOH HOH . G 3 HOH A 159 659 101 HOH HOH . G 3 HOH A 160 660 294 HOH HOH . G 3 HOH A 161 661 70 HOH HOH . G 3 HOH A 162 662 1 HOH HOH . G 3 HOH A 163 663 52 HOH HOH . G 3 HOH A 164 664 89 HOH HOH . G 3 HOH A 165 665 233 HOH HOH . G 3 HOH A 166 666 322 HOH HOH . G 3 HOH A 167 667 231 HOH HOH . G 3 HOH A 168 668 87 HOH HOH . G 3 HOH A 169 669 195 HOH HOH . G 3 HOH A 170 670 74 HOH HOH . G 3 HOH A 171 671 36 HOH HOH . G 3 HOH A 172 672 9 HOH HOH . G 3 HOH A 173 673 17 HOH HOH . G 3 HOH A 174 674 314 HOH HOH . G 3 HOH A 175 675 2 HOH HOH . G 3 HOH A 176 676 249 HOH HOH . G 3 HOH A 177 677 285 HOH HOH . G 3 HOH A 178 678 273 HOH HOH . G 3 HOH A 179 679 333 HOH HOH . G 3 HOH A 180 680 14 HOH HOH . G 3 HOH A 181 681 19 HOH HOH . G 3 HOH A 182 682 179 HOH HOH . G 3 HOH A 183 683 137 HOH HOH . G 3 HOH A 184 684 58 HOH HOH . G 3 HOH A 185 685 80 HOH HOH . G 3 HOH A 186 686 125 HOH HOH . G 3 HOH A 187 687 262 HOH HOH . G 3 HOH A 188 688 53 HOH HOH . G 3 HOH A 189 689 30 HOH HOH . G 3 HOH A 190 690 78 HOH HOH . G 3 HOH A 191 691 217 HOH HOH . G 3 HOH A 192 692 6 HOH HOH . G 3 HOH A 193 693 215 HOH HOH . G 3 HOH A 194 694 310 HOH HOH . G 3 HOH A 195 695 232 HOH HOH . G 3 HOH A 196 696 22 HOH HOH . G 3 HOH A 197 697 47 HOH HOH . G 3 HOH A 198 698 154 HOH HOH . G 3 HOH A 199 699 197 HOH HOH . G 3 HOH A 200 700 104 HOH HOH . G 3 HOH A 201 701 27 HOH HOH . G 3 HOH A 202 702 146 HOH HOH . G 3 HOH A 203 703 149 HOH HOH . G 3 HOH A 204 704 307 HOH HOH . G 3 HOH A 205 705 164 HOH HOH . G 3 HOH A 206 706 228 HOH HOH . G 3 HOH A 207 707 288 HOH HOH . G 3 HOH A 208 708 222 HOH HOH . G 3 HOH A 209 709 284 HOH HOH . G 3 HOH A 210 710 188 HOH HOH . G 3 HOH A 211 711 103 HOH HOH . G 3 HOH A 212 712 209 HOH HOH . G 3 HOH A 213 713 38 HOH HOH . G 3 HOH A 214 714 112 HOH HOH . G 3 HOH A 215 715 90 HOH HOH . G 3 HOH A 216 716 296 HOH HOH . G 3 HOH A 217 717 99 HOH HOH . G 3 HOH A 218 718 200 HOH HOH . G 3 HOH A 219 719 181 HOH HOH . G 3 HOH A 220 720 128 HOH HOH . G 3 HOH A 221 721 54 HOH HOH . G 3 HOH A 222 722 295 HOH HOH . G 3 HOH A 223 723 224 HOH HOH . G 3 HOH A 224 724 75 HOH HOH . G 3 HOH A 225 725 219 HOH HOH . G 3 HOH A 226 726 183 HOH HOH . G 3 HOH A 227 727 274 HOH HOH . G 3 HOH A 228 728 276 HOH HOH . G 3 HOH A 229 729 196 HOH HOH . G 3 HOH A 230 730 256 HOH HOH . G 3 HOH A 231 731 25 HOH HOH . G 3 HOH A 232 732 332 HOH HOH . G 3 HOH A 233 733 157 HOH HOH . G 3 HOH A 234 734 329 HOH HOH . G 3 HOH A 235 735 311 HOH HOH . G 3 HOH A 236 736 178 HOH HOH . G 3 HOH A 237 737 259 HOH HOH . G 3 HOH A 238 738 142 HOH HOH . G 3 HOH A 239 739 335 HOH HOH . G 3 HOH A 240 740 289 HOH HOH . G 3 HOH A 241 741 186 HOH HOH . G 3 HOH A 242 742 299 HOH HOH . G 3 HOH A 243 743 190 HOH HOH . G 3 HOH A 244 744 238 HOH HOH . G 3 HOH A 245 745 185 HOH HOH . G 3 HOH A 246 746 286 HOH HOH . G 3 HOH A 247 747 199 HOH HOH . G 3 HOH A 248 748 127 HOH HOH . G 3 HOH A 249 749 251 HOH HOH . G 3 HOH A 250 750 252 HOH HOH . G 3 HOH A 251 751 330 HOH HOH . G 3 HOH A 252 752 64 HOH HOH . G 3 HOH A 253 753 257 HOH HOH . G 3 HOH A 254 754 163 HOH HOH . G 3 HOH A 255 755 300 HOH HOH . G 3 HOH A 256 756 331 HOH HOH . G 3 HOH A 257 757 326 HOH HOH . G 3 HOH A 258 758 304 HOH HOH . G 3 HOH A 259 759 282 HOH HOH . G 3 HOH A 260 760 247 HOH HOH . G 3 HOH A 261 761 148 HOH HOH . G 3 HOH A 262 762 174 HOH HOH . G 3 HOH A 263 763 255 HOH HOH . G 3 HOH A 264 764 136 HOH HOH . G 3 HOH A 265 765 152 HOH HOH . G 3 HOH A 266 766 72 HOH HOH . G 3 HOH A 267 767 207 HOH HOH . G 3 HOH A 268 768 315 HOH HOH . G 3 HOH A 269 769 287 HOH HOH . G 3 HOH A 270 770 298 HOH HOH . G 3 HOH A 271 771 292 HOH HOH . G 3 HOH A 272 772 205 HOH HOH . G 3 HOH A 273 773 271 HOH HOH . G 3 HOH A 274 774 32 HOH HOH . G 3 HOH A 275 775 318 HOH HOH . G 3 HOH A 276 776 309 HOH HOH . G 3 HOH A 277 777 227 HOH HOH . G 3 HOH A 278 778 316 HOH HOH . G 3 HOH A 279 779 323 HOH HOH . G 3 HOH A 280 780 213 HOH HOH . G 3 HOH A 281 781 171 HOH HOH . G 3 HOH A 282 782 203 HOH HOH . G 3 HOH A 283 783 338 HOH HOH . G 3 HOH A 284 784 198 HOH HOH . G 3 HOH A 285 785 166 HOH HOH . G 3 HOH A 286 786 319 HOH HOH . G 3 HOH A 287 787 278 HOH HOH . G 3 HOH A 288 788 327 HOH HOH . G 3 HOH A 289 789 248 HOH HOH . G 3 HOH A 290 790 162 HOH HOH . G 3 HOH A 291 791 182 HOH HOH . G 3 HOH A 292 792 204 HOH HOH . G 3 HOH A 293 793 260 HOH HOH . G 3 HOH A 294 794 337 HOH HOH . G 3 HOH A 295 795 261 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 3.43 13.495 133.908 1 15.73 ? C1 EDO 402 A 1 HETATM 2 O O1 EDO . . . C 2 2.906 12.128 134.015 1 19.81 ? O1 EDO 402 A 1 HETATM 3 C C2 EDO . . . C 2 2.321 14.233 133.224 1 15.28 ? C2 EDO 402 A 1 HETATM 4 O O2 EDO . . . C 2 2.568 15.649 133.166 1 13.22 ? O2 EDO 402 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #