data_5ZTY
#
_model_server_result.job_id            kfD1sW4qbVNFNSJq9X364Q 
_model_server_result.datetime_utc      '2024-11-04 22:40:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5zty 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1203}' 
#
_entry.id    5ZTY 
#
_exptl.entry_id    5ZTY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5ZTY 
_cell.length_a            34.295 
_cell.length_b            106.24 
_cell.length_c            183.403 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ZTY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             173 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              174 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             178 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              179 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.038 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 393 n n 
C10 C9 OLC doub 394 n n 
C10 C11 OLC sing 395 n n 
C9 C8 OLC sing 396 n n 
C17 C16 OLC sing 397 z n 
C11 C12 OLC sing 398 n n 
C8 C7 OLC sing 399 n n 
C24 C22 OLC sing 400 n n 
C24 O25 OLC sing 401 n n 
C16 C15 OLC sing 402 n n 
C12 C13 OLC sing 403 n n 
C7 C6 OLC sing 404 n n 
C15 C14 OLC sing 405 n n 
C13 C14 OLC sing 406 n n 
C6 C5 OLC sing 407 n n 
C5 C4 OLC sing 408 n n 
C4 C3 OLC sing 409 n n 
C3 C2 OLC sing 410 n n 
C2 C1 OLC sing 411 n n 
C21 C22 OLC sing 412 n n 
C21 O20 OLC sing 413 n n 
C1 O19 OLC doub 414 n n 
C1 O20 OLC sing 415 n n 
C22 O23 OLC sing 416 n n 
C18 H18 OLC sing 417 n n 
C18 H18A OLC sing 418 n n 
C18 H18B OLC sing 419 n n 
C10 H10 OLC sing 420 n n 
C9 H9 OLC sing 421 n n 
C17 H17 OLC sing 422 n n 
C17 H17A OLC sing 423 n n 
C11 H11 OLC sing 424 n n 
C11 H11A OLC sing 425 n n 
C8 H8 OLC sing 426 n n 
C8 H8A OLC sing 427 n n 
C24 H24 OLC sing 428 n n 
C24 H24A OLC sing 429 n n 
C16 H16 OLC sing 430 n n 
C16 H16A OLC sing 431 n n 
C12 H12 OLC sing 432 n n 
C12 H12A OLC sing 433 n n 
C7 H7 OLC sing 434 n n 
C7 H7A OLC sing 435 n n 
C15 H15 OLC sing 436 n n 
C15 H15A OLC sing 437 n n 
C13 H13 OLC sing 438 n n 
C13 H13A OLC sing 439 n n 
C6 H6 OLC sing 440 n n 
C6 H6A OLC sing 441 n n 
C14 H14 OLC sing 442 n n 
C14 H14A OLC sing 443 n n 
C5 H5 OLC sing 444 n n 
C5 H5A OLC sing 445 n n 
C4 H4 OLC sing 446 n n 
C4 H4A OLC sing 447 n n 
C3 H3 OLC sing 448 n n 
C3 H3A OLC sing 449 n n 
C2 H2 OLC sing 450 n n 
C2 H2A OLC sing 451 n n 
C21 H21 OLC sing 452 n n 
C21 H21A OLC sing 453 n n 
C22 H22 OLC sing 454 n n 
O25 HO25 OLC sing 455 n n 
O23 HO23 OLC sing 456 n n 
#
_atom_sites.entry_id                     5ZTY 
_atom_sites.fract_transf_matrix[1][1]    0.029159 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009413 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005452 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 9JU A 1 1201 1201 9JU AM7 . 
C 3 OLA A 1 1202 1210 OLA OLA . 
D 4 OLC A 1 1203 1211 OLC OLC . 
E 4 OLC A 1 1204 1212 OLC OLC . 
F 4 OLC A 1 1205 1213 OLC OLC . 
G 5 PEG A 1 1206 1214 PEG PEG . 
H 5 PEG A 1 1207 1215 PEG PEG . 
I 6 EPE A 1 1208 1216 EPE EPE . 
J 6 EPE A 1 1209 1217 EPE EPE . 
K 7 PG4 A 1 1210 1218 PG4 PG4 . 
L 8 SO4 A 1 1211 1221 SO4 SO4 . 
M 8 SO4 A 1 1212 1222 SO4 SO4 . 
N 8 SO4 A 1 1213 1223 SO4 SO4 . 
O 8 SO4 A 1 1214 1224 SO4 SO4 . 
P 8 SO4 A 1 1215 1225 SO4 SO4 . 
Q 9 HOH A 1 1301 1239 HOH HOH . 
Q 9 HOH A 2 1302 1233 HOH HOH . 
Q 9 HOH A 3 1303 1270 HOH HOH . 
Q 9 HOH A 4 1304 1261 HOH HOH . 
Q 9 HOH A 5 1305 1277 HOH HOH . 
Q 9 HOH A 6 1306 1258 HOH HOH . 
Q 9 HOH A 7 1307 1255 HOH HOH . 
Q 9 HOH A 8 1308 1257 HOH HOH . 
Q 9 HOH A 9 1309 1246 HOH HOH . 
Q 9 HOH A 10 1310 1238 HOH HOH . 
Q 9 HOH A 11 1311 1237 HOH HOH . 
Q 9 HOH A 12 1312 1260 HOH HOH . 
Q 9 HOH A 13 1313 1278 HOH HOH . 
Q 9 HOH A 14 1314 1279 HOH HOH . 
Q 9 HOH A 15 1315 1232 HOH HOH . 
Q 9 HOH A 16 1316 1245 HOH HOH . 
Q 9 HOH A 17 1317 1249 HOH HOH . 
Q 9 HOH A 18 1318 1275 HOH HOH . 
Q 9 HOH A 19 1319 1247 HOH HOH . 
Q 9 HOH A 20 1320 1263 HOH HOH . 
Q 9 HOH A 21 1321 1262 HOH HOH . 
Q 9 HOH A 22 1322 1242 HOH HOH . 
Q 9 HOH A 23 1323 1248 HOH HOH . 
Q 9 HOH A 24 1324 1274 HOH HOH . 
Q 9 HOH A 25 1325 1243 HOH HOH . 
Q 9 HOH A 26 1326 1231 HOH HOH . 
Q 9 HOH A 27 1327 1240 HOH HOH . 
Q 9 HOH A 28 1328 1241 HOH HOH . 
Q 9 HOH A 29 1329 1244 HOH HOH . 
Q 9 HOH A 30 1330 1267 HOH HOH . 
Q 9 HOH A 31 1331 1264 HOH HOH . 
Q 9 HOH A 32 1332 1268 HOH HOH . 
Q 9 HOH A 33 1333 1259 HOH HOH . 
Q 9 HOH A 34 1334 1251 HOH HOH . 
Q 9 HOH A 35 1335 1254 HOH HOH . 
Q 9 HOH A 36 1336 1235 HOH HOH . 
Q 9 HOH A 37 1337 1271 HOH HOH . 
Q 9 HOH A 38 1338 1250 HOH HOH . 
Q 9 HOH A 39 1339 1266 HOH HOH . 
Q 9 HOH A 40 1340 1234 HOH HOH . 
Q 9 HOH A 41 1341 1236 HOH HOH . 
Q 9 HOH A 42 1342 1256 HOH HOH . 
Q 9 HOH A 43 1343 1252 HOH HOH . 
Q 9 HOH A 44 1344 1253 HOH HOH . 
Q 9 HOH A 45 1345 1272 HOH HOH . 
Q 9 HOH A 46 1346 1265 HOH HOH . 
Q 9 HOH A 47 1347 1269 HOH HOH . 
Q 9 HOH A 48 1348 1273 HOH HOH . 
Q 9 HOH A 49 1349 1276 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 OLC . . . D 4 35.976 -13.984 -35.545 1 111.31 ? C10 OLC 1203 A 1 
HETATM 2 C C9 OLC . . . D 4 36.098 -12.466 -35.422 1 112.11 ? C9 OLC 1203 A 1 
HETATM 3 C C8 OLC . . . D 4 34.853 -11.82 -34.811 1 113.18 ? C8 OLC 1203 A 1 
HETATM 4 C C24 OLC . . . D 4 30.704 -3.808 -26.235 1 117.77 ? C24 OLC 1203 A 1 
HETATM 5 C C7 OLC . . . D 4 35.186 -10.871 -33.658 1 113.9 ? C7 OLC 1203 A 1 
HETATM 6 C C6 OLC . . . D 4 34.035 -10.683 -32.667 1 114.08 ? C6 OLC 1203 A 1 
HETATM 7 C C5 OLC . . . D 4 34.209 -9.44 -31.792 1 114.63 ? C5 OLC 1203 A 1 
HETATM 8 C C4 OLC . . . D 4 34.498 -9.773 -30.33 1 115.18 ? C4 OLC 1203 A 1 
HETATM 9 C C3 OLC . . . D 4 33.527 -9.084 -29.377 1 116.06 ? C3 OLC 1203 A 1 
HETATM 10 C C2 OLC . . . D 4 34.244 -8.127 -28.428 1 117.61 ? C2 OLC 1203 A 1 
HETATM 11 C C21 OLC . . . D 4 31.883 -5.957 -26.811 1 120.12 ? C21 OLC 1203 A 1 
HETATM 12 C C1 OLC . . . D 4 33.45 -7.764 -27.169 1 119.84 ? C1 OLC 1203 A 1 
HETATM 13 C C22 OLC . . . D 4 31.841 -4.755 -25.86 1 119.73 ? C22 OLC 1203 A 1 
HETATM 14 O O19 OLC . . . D 4 33.086 -8.623 -26.427 1 120.64 ? O19 OLC 1203 A 1 
HETATM 15 O O25 OLC . . . D 4 30.676 -2.723 -25.349 1 117.04 ? O25 OLC 1203 A 1 
HETATM 16 O O23 OLC . . . D 4 31.677 -5.197 -24.54 1 120.95 ? O23 OLC 1203 A 1 
HETATM 17 O O20 OLC . . . D 4 33.215 -6.405 -26.875 1 120.49 ? O20 OLC 1203 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           17 
#