data_5ZTY # _model_server_result.job_id PWueRkhP-lBFsTPteyYCWA _model_server_result.datetime_utc '2024-11-04 22:38:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zty # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1209}' # _entry.id 5ZTY # _exptl.entry_id 5ZTY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ZTY _cell.length_a 34.295 _cell.length_b 106.24 _cell.length_c 183.403 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZTY _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 I N N ? 6 J N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 173 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 174 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 178 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 179 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.038 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 153 n n N1 C6 EPE sing 154 n n N1 C9 EPE sing 155 n n C2 C3 EPE sing 156 n n C2 H21 EPE sing 157 n n C2 H22 EPE sing 158 n n C3 N4 EPE sing 159 n n C3 H31 EPE sing 160 n n C3 H32 EPE sing 161 n n N4 C5 EPE sing 162 n n N4 C7 EPE sing 163 n n C5 C6 EPE sing 164 n n C5 H51 EPE sing 165 n n C5 H52 EPE sing 166 n n C6 H61 EPE sing 167 n n C6 H62 EPE sing 168 n n C7 C8 EPE sing 169 n n C7 H71 EPE sing 170 n n C7 H72 EPE sing 171 n n C8 O8 EPE sing 172 n n C8 H81 EPE sing 173 n n C8 H82 EPE sing 174 n n O8 HO8 EPE sing 175 n n C9 C10 EPE sing 176 n n C9 H91 EPE sing 177 n n C9 H92 EPE sing 178 n n C10 S EPE sing 179 n n C10 H101 EPE sing 180 n n C10 H102 EPE sing 181 n n S O1S EPE doub 182 n n S O2S EPE doub 183 n n S O3S EPE sing 184 n n O3S HOS3 EPE sing 185 n n # _atom_sites.entry_id 5ZTY _atom_sites.fract_transf_matrix[1][1] 0.029159 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009413 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005452 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9JU A 1 1201 1201 9JU AM7 . C 3 OLA A 1 1202 1210 OLA OLA . D 4 OLC A 1 1203 1211 OLC OLC . E 4 OLC A 1 1204 1212 OLC OLC . F 4 OLC A 1 1205 1213 OLC OLC . G 5 PEG A 1 1206 1214 PEG PEG . H 5 PEG A 1 1207 1215 PEG PEG . I 6 EPE A 1 1208 1216 EPE EPE . J 6 EPE A 1 1209 1217 EPE EPE . K 7 PG4 A 1 1210 1218 PG4 PG4 . L 8 SO4 A 1 1211 1221 SO4 SO4 . M 8 SO4 A 1 1212 1222 SO4 SO4 . N 8 SO4 A 1 1213 1223 SO4 SO4 . O 8 SO4 A 1 1214 1224 SO4 SO4 . P 8 SO4 A 1 1215 1225 SO4 SO4 . Q 9 HOH A 1 1301 1239 HOH HOH . Q 9 HOH A 2 1302 1233 HOH HOH . Q 9 HOH A 3 1303 1270 HOH HOH . Q 9 HOH A 4 1304 1261 HOH HOH . Q 9 HOH A 5 1305 1277 HOH HOH . Q 9 HOH A 6 1306 1258 HOH HOH . Q 9 HOH A 7 1307 1255 HOH HOH . Q 9 HOH A 8 1308 1257 HOH HOH . Q 9 HOH A 9 1309 1246 HOH HOH . Q 9 HOH A 10 1310 1238 HOH HOH . Q 9 HOH A 11 1311 1237 HOH HOH . Q 9 HOH A 12 1312 1260 HOH HOH . Q 9 HOH A 13 1313 1278 HOH HOH . Q 9 HOH A 14 1314 1279 HOH HOH . Q 9 HOH A 15 1315 1232 HOH HOH . Q 9 HOH A 16 1316 1245 HOH HOH . Q 9 HOH A 17 1317 1249 HOH HOH . Q 9 HOH A 18 1318 1275 HOH HOH . Q 9 HOH A 19 1319 1247 HOH HOH . Q 9 HOH A 20 1320 1263 HOH HOH . Q 9 HOH A 21 1321 1262 HOH HOH . Q 9 HOH A 22 1322 1242 HOH HOH . Q 9 HOH A 23 1323 1248 HOH HOH . Q 9 HOH A 24 1324 1274 HOH HOH . Q 9 HOH A 25 1325 1243 HOH HOH . Q 9 HOH A 26 1326 1231 HOH HOH . Q 9 HOH A 27 1327 1240 HOH HOH . Q 9 HOH A 28 1328 1241 HOH HOH . Q 9 HOH A 29 1329 1244 HOH HOH . Q 9 HOH A 30 1330 1267 HOH HOH . Q 9 HOH A 31 1331 1264 HOH HOH . Q 9 HOH A 32 1332 1268 HOH HOH . Q 9 HOH A 33 1333 1259 HOH HOH . Q 9 HOH A 34 1334 1251 HOH HOH . Q 9 HOH A 35 1335 1254 HOH HOH . Q 9 HOH A 36 1336 1235 HOH HOH . Q 9 HOH A 37 1337 1271 HOH HOH . Q 9 HOH A 38 1338 1250 HOH HOH . Q 9 HOH A 39 1339 1266 HOH HOH . Q 9 HOH A 40 1340 1234 HOH HOH . Q 9 HOH A 41 1341 1236 HOH HOH . Q 9 HOH A 42 1342 1256 HOH HOH . Q 9 HOH A 43 1343 1252 HOH HOH . Q 9 HOH A 44 1344 1253 HOH HOH . Q 9 HOH A 45 1345 1272 HOH HOH . Q 9 HOH A 46 1346 1265 HOH HOH . Q 9 HOH A 47 1347 1269 HOH HOH . Q 9 HOH A 48 1348 1273 HOH HOH . Q 9 HOH A 49 1349 1276 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . J 6 -6.393 13.759 1.455 1 221.57 ? N1 EPE 1209 A 1 HETATM 2 C C2 EPE . . . J 6 -7.236 14.873 0.991 1 221.34 ? C2 EPE 1209 A 1 HETATM 3 C C3 EPE . . . J 6 -6.47 15.757 0.024 1 221.17 ? C3 EPE 1209 A 1 HETATM 4 N N4 EPE . . . J 6 -5.256 16.285 0.658 1 221 ? N4 EPE 1209 A 1 HETATM 5 C C5 EPE . . . J 6 -4.409 15.169 1.099 1 221.05 ? C5 EPE 1209 A 1 HETATM 6 C C6 EPE . . . J 6 -5.163 14.28 2.073 1 221.21 ? C6 EPE 1209 A 1 HETATM 7 C C7 EPE . . . J 6 -4.529 17.182 -0.249 1 220.79 ? C7 EPE 1209 A 1 HETATM 8 C C8 EPE . . . J 6 -4.448 18.6 0.267 1 220.59 ? C8 EPE 1209 A 1 HETATM 9 O O8 EPE . . . J 6 -5.741 19.125 0.514 1 220.45 ? O8 EPE 1209 A 1 HETATM 10 C C9 EPE . . . J 6 -7.123 12.837 2.345 1 222.33 ? C9 EPE 1209 A 1 HETATM 11 C C10 EPE . . . J 6 -7.654 13.449 3.634 1 223.1 ? C10 EPE 1209 A 1 HETATM 12 S S EPE . . . J 6 -8.708 12.418 4.483 1 223.83 ? S EPE 1209 A 1 HETATM 13 O O1S EPE . . . J 6 -7.929 11.223 4.796 1 224.07 ? O1S EPE 1209 A 1 HETATM 14 O O2S EPE . . . J 6 -9.816 12.129 3.595 1 223.94 ? O2S EPE 1209 A 1 HETATM 15 O O3S EPE . . . J 6 -9.112 13.131 5.676 1 223.8 ? O3S EPE 1209 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #