data_5ZX3
#
_model_server_result.job_id            cHE60LQty1RxRMKM_kco8A 
_model_server_result.datetime_utc      '2024-10-11 04:29:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5zx3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":2002}' 
#
_entry.id    5ZX3 
#
_exptl.entry_id    5ZX3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          118.72 
_cell.angle_gamma         90 
_cell.entry_id            5ZX3 
_cell.length_a            130.572 
_cell.length_b            159.79 
_cell.length_c            131.437 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5ZX3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 G N N 
? 6 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 D SG CYS 61 D CYS 60 1_555 H ZN ZN . D ZN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc2 D SG CYS 63 D CYS 62 1_555 H ZN ZN . D ZN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc3 D SG CYS 76 D CYS 75 1_555 H ZN ZN . D ZN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
metalc ? metalc4 D SG CYS 79 D CYS 78 1_555 H ZN ZN . D ZN 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? 
metalc ? metalc5 D SG CYS 892 D CYS 891 1_555 G ZN ZN . D ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? 
metalc ? metalc6 D SG CYS 969 D CYS 968 1_555 G ZN ZN . D ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc7 D SG CYS 976 D CYS 975 1_555 G ZN ZN . D ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? 
metalc ? metalc8 D SG CYS 979 D CYS 978 1_555 G ZN ZN . D ZN 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5ZX3 
_atom_sites.fract_transf_matrix[1][1]    0.007659 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004196 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006258 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008675 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 6 ZN D 1 2001 2001 ZN ZN . 
H 6 ZN D 1 2002 2002 ZN ZN . 
I 7 HOH A 1 401 12 HOH HOH . 
J 7 HOH C 1 1201 40 HOH HOH . 
J 7 HOH C 2 1202 32 HOH HOH . 
J 7 HOH C 3 1203 21 HOH HOH . 
J 7 HOH C 4 1204 57 HOH HOH . 
J 7 HOH C 5 1205 33 HOH HOH . 
J 7 HOH C 6 1206 50 HOH HOH . 
J 7 HOH C 7 1207 44 HOH HOH . 
J 7 HOH C 8 1208 39 HOH HOH . 
J 7 HOH C 9 1209 46 HOH HOH . 
J 7 HOH C 10 1210 26 HOH HOH . 
J 7 HOH C 11 1211 51 HOH HOH . 
J 7 HOH C 12 1212 36 HOH HOH . 
J 7 HOH C 13 1213 43 HOH HOH . 
J 7 HOH C 14 1214 22 HOH HOH . 
J 7 HOH C 15 1215 17 HOH HOH . 
J 7 HOH C 16 1216 10 HOH HOH . 
J 7 HOH C 17 1217 41 HOH HOH . 
J 7 HOH C 18 1218 16 HOH HOH . 
J 7 HOH C 19 1219 9 HOH HOH . 
J 7 HOH C 20 1220 47 HOH HOH . 
J 7 HOH C 21 1221 54 HOH HOH . 
J 7 HOH C 22 1222 3 HOH HOH . 
J 7 HOH C 23 1223 31 HOH HOH . 
J 7 HOH C 24 1224 25 HOH HOH . 
J 7 HOH C 25 1225 55 HOH HOH . 
J 7 HOH C 26 1226 29 HOH HOH . 
J 7 HOH C 27 1227 58 HOH HOH . 
J 7 HOH C 28 1228 48 HOH HOH . 
J 7 HOH C 29 1229 28 HOH HOH . 
K 7 HOH D 1 2101 42 HOH HOH . 
K 7 HOH D 2 2102 35 HOH HOH . 
K 7 HOH D 3 2103 30 HOH HOH . 
K 7 HOH D 4 2104 52 HOH HOH . 
K 7 HOH D 5 2105 27 HOH HOH . 
K 7 HOH D 6 2106 13 HOH HOH . 
K 7 HOH D 7 2107 49 HOH HOH . 
K 7 HOH D 8 2108 20 HOH HOH . 
K 7 HOH D 9 2109 4 HOH HOH . 
K 7 HOH D 10 2110 45 HOH HOH . 
K 7 HOH D 11 2111 14 HOH HOH . 
K 7 HOH D 12 2112 56 HOH HOH . 
K 7 HOH D 13 2113 11 HOH HOH . 
K 7 HOH D 14 2114 6 HOH HOH . 
K 7 HOH D 15 2115 18 HOH HOH . 
K 7 HOH D 16 2116 15 HOH HOH . 
K 7 HOH D 17 2117 37 HOH HOH . 
K 7 HOH D 18 2118 7 HOH HOH . 
K 7 HOH D 19 2119 34 HOH HOH . 
K 7 HOH D 20 2120 38 HOH HOH . 
K 7 HOH D 21 2121 53 HOH HOH . 
K 7 HOH D 22 2122 1 HOH HOH . 
L 7 HOH F 1 301 2 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         H 
_atom_site.label_entity_id       6 
_atom_site.Cartn_x               132.082 
_atom_site.Cartn_y               -43.631 
_atom_site.Cartn_z               80.506 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        87.15 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           2002 
_atom_site.auth_asym_id          D 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#