data_5ZYJ # _model_server_result.job_id qCRPd7CNuZF5g2c1j62Irw _model_server_result.datetime_utc '2024-10-20 01:20:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zyj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":600}' # _entry.id 5ZYJ # _exptl.entry_id 5ZYJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 449.605 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[4-[4-pentyl-3-[(1~{S},2~{R})-2-pyridin-2-ylcyclopropyl]phenyl]phenyl]sulfonylethanol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ZYJ _cell.length_a 59.989 _cell.length_b 59.989 _cell.length_c 152.981 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZYJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H31 N O3 S' _chem_comp.formula_weight 449.605 _chem_comp.id 9ML _chem_comp.mon_nstd_flag . _chem_comp.name 2-[4-[4-pentyl-3-[(1~{S},2~{R})-2-pyridin-2-ylcyclopropyl]phenyl]phenyl]sulfonylethanol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C28 C27 9ML sing 1 n n C26 C27 9ML sing 2 n n C26 C25 9ML sing 3 n n C25 C24 9ML sing 4 n n C23 C1 9ML doub 5 n y C23 C3 9ML sing 6 n y C1 C6 9ML sing 7 n y C24 C3 9ML sing 8 n n O3 C21 9ML sing 9 n n C3 C4 9ML doub 10 n y C21 C20 9ML sing 11 n n C11 C12 9ML doub 12 n y C11 C10 9ML sing 13 n y C6 C10 9ML sing 14 n n C6 C5 9ML doub 15 n y C12 C7 9ML sing 16 n y C10 C9 9ML doub 17 n y C4 C5 9ML sing 18 n y C4 C13 9ML sing 19 n n C20 S1 9ML sing 20 n n O2 S1 9ML doub 21 n n C7 S1 9ML sing 22 n n C7 C8 9ML doub 23 n y C19 N1 9ML doub 24 n y C19 C15 9ML sing 25 n y N1 C18 9ML sing 26 n y C22 C13 9ML sing 27 n n C22 C14 9ML sing 28 n n C9 C8 9ML sing 29 n y C13 C14 9ML sing 30 n n S1 O1 9ML doub 31 n n C15 C16 9ML doub 32 n y C18 C14 9ML sing 33 n n C18 C17 9ML doub 34 n y C16 C17 9ML sing 35 n y C12 H1 9ML sing 36 n n C13 H2 9ML sing 37 n n C14 H3 9ML sing 38 n n C15 H4 9ML sing 39 n n C17 H5 9ML sing 40 n n C19 H6 9ML sing 41 n n C20 H7 9ML sing 42 n n C20 H8 9ML sing 43 n n C5 H9 9ML sing 44 n n C9 H10 9ML sing 45 n n C21 H11 9ML sing 46 n n C21 H12 9ML sing 47 n n O3 H13 9ML sing 48 n n C8 H14 9ML sing 49 n n C11 H15 9ML sing 50 n n C24 H16 9ML sing 51 n n C24 H17 9ML sing 52 n n C25 H18 9ML sing 53 n n C25 H19 9ML sing 54 n n C26 H20 9ML sing 55 n n C26 H21 9ML sing 56 n n C27 H22 9ML sing 57 n n C27 H23 9ML sing 58 n n C28 H24 9ML sing 59 n n C28 H25 9ML sing 60 n n C28 H26 9ML sing 61 n n C23 H27 9ML sing 62 n n C1 H28 9ML sing 63 n n C22 H29 9ML sing 64 n n C22 H30 9ML sing 65 n n C16 H31 9ML sing 66 n n # _atom_sites.entry_id 5ZYJ _atom_sites.fract_transf_matrix[1][1] 0.01667 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01667 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006537 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9ML A 1 600 600 9ML EXP . C 3 GOL A 1 601 601 GOL GOL . D 4 HOH A 1 701 95 HOH HOH . D 4 HOH A 2 702 9 HOH HOH . D 4 HOH A 3 703 118 HOH HOH . D 4 HOH A 4 704 105 HOH HOH . D 4 HOH A 5 705 146 HOH HOH . D 4 HOH A 6 706 40 HOH HOH . D 4 HOH A 7 707 143 HOH HOH . D 4 HOH A 8 708 24 HOH HOH . D 4 HOH A 9 709 133 HOH HOH . D 4 HOH A 10 710 161 HOH HOH . D 4 HOH A 11 711 58 HOH HOH . D 4 HOH A 12 712 65 HOH HOH . D 4 HOH A 13 713 82 HOH HOH . D 4 HOH A 14 714 99 HOH HOH . D 4 HOH A 15 715 139 HOH HOH . D 4 HOH A 16 716 164 HOH HOH . D 4 HOH A 17 717 63 HOH HOH . D 4 HOH A 18 718 85 HOH HOH . D 4 HOH A 19 719 21 HOH HOH . D 4 HOH A 20 720 10 HOH HOH . D 4 HOH A 21 721 110 HOH HOH . D 4 HOH A 22 722 73 HOH HOH . D 4 HOH A 23 723 76 HOH HOH . D 4 HOH A 24 724 39 HOH HOH . D 4 HOH A 25 725 90 HOH HOH . D 4 HOH A 26 726 17 HOH HOH . D 4 HOH A 27 727 141 HOH HOH . D 4 HOH A 28 728 94 HOH HOH . D 4 HOH A 29 729 89 HOH HOH . D 4 HOH A 30 730 11 HOH HOH . D 4 HOH A 31 731 111 HOH HOH . D 4 HOH A 32 732 88 HOH HOH . D 4 HOH A 33 733 97 HOH HOH . D 4 HOH A 34 734 115 HOH HOH . D 4 HOH A 35 735 124 HOH HOH . D 4 HOH A 36 736 150 HOH HOH . D 4 HOH A 37 737 136 HOH HOH . D 4 HOH A 38 738 6 HOH HOH . D 4 HOH A 39 739 74 HOH HOH . D 4 HOH A 40 740 120 HOH HOH . D 4 HOH A 41 741 78 HOH HOH . D 4 HOH A 42 742 13 HOH HOH . D 4 HOH A 43 743 19 HOH HOH . D 4 HOH A 44 744 67 HOH HOH . D 4 HOH A 45 745 3 HOH HOH . D 4 HOH A 46 746 26 HOH HOH . D 4 HOH A 47 747 137 HOH HOH . D 4 HOH A 48 748 29 HOH HOH . D 4 HOH A 49 749 96 HOH HOH . D 4 HOH A 50 750 81 HOH HOH . D 4 HOH A 51 751 56 HOH HOH . D 4 HOH A 52 752 55 HOH HOH . D 4 HOH A 53 753 70 HOH HOH . D 4 HOH A 54 754 83 HOH HOH . D 4 HOH A 55 755 47 HOH HOH . D 4 HOH A 56 756 16 HOH HOH . D 4 HOH A 57 757 158 HOH HOH . D 4 HOH A 58 758 62 HOH HOH . D 4 HOH A 59 759 93 HOH HOH . D 4 HOH A 60 760 165 HOH HOH . D 4 HOH A 61 761 117 HOH HOH . D 4 HOH A 62 762 30 HOH HOH . D 4 HOH A 63 763 153 HOH HOH . D 4 HOH A 64 764 92 HOH HOH . D 4 HOH A 65 765 33 HOH HOH . D 4 HOH A 66 766 35 HOH HOH . D 4 HOH A 67 767 25 HOH HOH . D 4 HOH A 68 768 43 HOH HOH . D 4 HOH A 69 769 69 HOH HOH . D 4 HOH A 70 770 18 HOH HOH . D 4 HOH A 71 771 125 HOH HOH . D 4 HOH A 72 772 1 HOH HOH . D 4 HOH A 73 773 119 HOH HOH . D 4 HOH A 74 774 75 HOH HOH . D 4 HOH A 75 775 100 HOH HOH . D 4 HOH A 76 776 42 HOH HOH . D 4 HOH A 77 777 12 HOH HOH . D 4 HOH A 78 778 5 HOH HOH . D 4 HOH A 79 779 31 HOH HOH . D 4 HOH A 80 780 14 HOH HOH . D 4 HOH A 81 781 159 HOH HOH . D 4 HOH A 82 782 103 HOH HOH . D 4 HOH A 83 783 46 HOH HOH . D 4 HOH A 84 784 59 HOH HOH . D 4 HOH A 85 785 107 HOH HOH . D 4 HOH A 86 786 121 HOH HOH . D 4 HOH A 87 787 144 HOH HOH . D 4 HOH A 88 788 4 HOH HOH . D 4 HOH A 89 789 54 HOH HOH . D 4 HOH A 90 790 2 HOH HOH . D 4 HOH A 91 791 22 HOH HOH . D 4 HOH A 92 792 86 HOH HOH . D 4 HOH A 93 793 34 HOH HOH . D 4 HOH A 94 794 98 HOH HOH . D 4 HOH A 95 795 15 HOH HOH . D 4 HOH A 96 796 101 HOH HOH . D 4 HOH A 97 797 53 HOH HOH . D 4 HOH A 98 798 38 HOH HOH . D 4 HOH A 99 799 91 HOH HOH . D 4 HOH A 100 800 32 HOH HOH . D 4 HOH A 101 801 27 HOH HOH . D 4 HOH A 102 802 52 HOH HOH . D 4 HOH A 103 803 37 HOH HOH . D 4 HOH A 104 804 84 HOH HOH . D 4 HOH A 105 805 23 HOH HOH . D 4 HOH A 106 806 112 HOH HOH . D 4 HOH A 107 807 36 HOH HOH . D 4 HOH A 108 808 49 HOH HOH . D 4 HOH A 109 809 108 HOH HOH . D 4 HOH A 110 810 132 HOH HOH . D 4 HOH A 111 811 50 HOH HOH . D 4 HOH A 112 812 7 HOH HOH . D 4 HOH A 113 813 87 HOH HOH . D 4 HOH A 114 814 104 HOH HOH . D 4 HOH A 115 815 123 HOH HOH . D 4 HOH A 116 816 20 HOH HOH . D 4 HOH A 117 817 106 HOH HOH . D 4 HOH A 118 818 41 HOH HOH . D 4 HOH A 119 819 147 HOH HOH . D 4 HOH A 120 820 163 HOH HOH . D 4 HOH A 121 821 8 HOH HOH . D 4 HOH A 122 822 122 HOH HOH . D 4 HOH A 123 823 102 HOH HOH . D 4 HOH A 124 824 60 HOH HOH . D 4 HOH A 125 825 57 HOH HOH . D 4 HOH A 126 826 28 HOH HOH . D 4 HOH A 127 827 45 HOH HOH . D 4 HOH A 128 828 48 HOH HOH . D 4 HOH A 129 829 140 HOH HOH . D 4 HOH A 130 830 61 HOH HOH . D 4 HOH A 131 831 44 HOH HOH . D 4 HOH A 132 832 80 HOH HOH . D 4 HOH A 133 833 51 HOH HOH . D 4 HOH A 134 834 151 HOH HOH . D 4 HOH A 135 835 157 HOH HOH . D 4 HOH A 136 836 152 HOH HOH . D 4 HOH A 137 837 116 HOH HOH . D 4 HOH A 138 838 154 HOH HOH . D 4 HOH A 139 839 77 HOH HOH . D 4 HOH A 140 840 162 HOH HOH . D 4 HOH A 141 841 71 HOH HOH . D 4 HOH A 142 842 79 HOH HOH . D 4 HOH A 143 843 135 HOH HOH . D 4 HOH A 144 844 126 HOH HOH . D 4 HOH A 145 845 130 HOH HOH . D 4 HOH A 146 846 113 HOH HOH . D 4 HOH A 147 847 142 HOH HOH . D 4 HOH A 148 848 138 HOH HOH . D 4 HOH A 149 849 148 HOH HOH . D 4 HOH A 150 850 155 HOH HOH . D 4 HOH A 151 851 66 HOH HOH . D 4 HOH A 152 852 64 HOH HOH . D 4 HOH A 153 853 68 HOH HOH . D 4 HOH A 154 854 128 HOH HOH . D 4 HOH A 155 855 72 HOH HOH . D 4 HOH A 156 856 109 HOH HOH . D 4 HOH A 157 857 114 HOH HOH . D 4 HOH A 158 858 131 HOH HOH . D 4 HOH A 159 859 134 HOH HOH . D 4 HOH A 160 860 160 HOH HOH . D 4 HOH A 161 861 129 HOH HOH . D 4 HOH A 162 862 145 HOH HOH . D 4 HOH A 163 863 156 HOH HOH . D 4 HOH A 164 864 149 HOH HOH . D 4 HOH A 165 865 127 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C12 9ML . . . B 2 -30.127 6.249 -7.39 1 17.69 ? C12 9ML 600 A 1 HETATM 2 C C13 9ML . . . B 2 -36.456 2.692 -5.665 1 23.64 ? C13 9ML 600 A 1 HETATM 3 C C14 9ML . . . B 2 -35.929 1.604 -4.729 1 22.78 ? C14 9ML 600 A 1 HETATM 4 C C15 9ML . . . B 2 -31.951 0.237 -5.249 1 26.44 ? C15 9ML 600 A 1 HETATM 5 C C17 9ML . . . B 2 -33.603 1.251 -3.787 1 23.38 ? C17 9ML 600 A 1 HETATM 6 C C18 9ML . . . B 2 -34.556 1.115 -4.841 1 25.05 ? C18 9ML 600 A 1 HETATM 7 C C19 9ML . . . B 2 -32.941 0.161 -6.254 1 25.6 ? C19 9ML 600 A 1 HETATM 8 C C20 9ML . . . B 2 -26.631 5.392 -6.275 1 21.7 ? C20 9ML 600 A 1 HETATM 9 N N1 9ML . . . B 2 -34.231 0.589 -6.074 1 29.9 ? N1 9ML 600 A 1 HETATM 10 C C5 9ML . . . B 2 -34.339 3.804 -6.384 1 18.29 ? C5 9ML 600 A 1 HETATM 11 C C6 9ML . . . B 2 -33.521 4.417 -7.347 1 19.58 ? C6 9ML 600 A 1 HETATM 12 C C7 9ML . . . B 2 -29.609 5.761 -6.213 1 17.8 ? C7 9ML 600 A 1 HETATM 13 C C9 9ML . . . B 2 -31.582 4.427 -5.782 1 22.34 ? C9 9ML 600 A 1 HETATM 14 O O1 9ML . . . B 2 -27.969 6.196 -4.213 1 20.66 ? O1 9ML 600 A 1 HETATM 15 S S1 9ML . . . B 2 -28.067 6.358 -5.653 1 20.3 ? S1 9ML 600 A 1 HETATM 16 O O2 9ML . . . B 2 -28.032 7.709 -6.195 1 16.57 ? O2 9ML 600 A 1 HETATM 17 C C21 9ML . . . B 2 -26.527 5.529 -7.813 1 22.86 ? C21 9ML 600 A 1 HETATM 18 O O3 9ML . . . B 2 -27.387 4.602 -8.48 1 18.43 ? O3 9ML 600 A 1 HETATM 19 C C8 9ML . . . B 2 -30.297 4.875 -5.352 1 22.39 ? C8 9ML 600 A 1 HETATM 20 C C10 9ML . . . B 2 -32.154 4.887 -6.967 1 18.85 ? C10 9ML 600 A 1 HETATM 21 C C11 9ML . . . B 2 -31.427 5.774 -7.778 1 19.72 ? C11 9ML 600 A 1 HETATM 22 C C4 9ML . . . B 2 -35.636 3.368 -6.736 1 20.55 ? C4 9ML 600 A 1 HETATM 23 C C3 9ML . . . B 2 -36.101 3.492 -8.067 1 20.17 ? C3 9ML 600 A 1 HETATM 24 C C24 9ML . . . B 2 -37.502 3.084 -8.48 1 19.42 ? C24 9ML 600 A 1 HETATM 25 C C25 9ML . . . B 2 -37.486 1.762 -9.294 1 27.59 ? C25 9ML 600 A 1 HETATM 26 C C26 9ML . . . B 2 -38.97 1.387 -9.471 1 29.75 ? C26 9ML 600 A 1 HETATM 27 C C27 9ML . . . B 2 -39.113 -0.085 -9.122 1 35.92 ? C27 9ML 600 A 1 HETATM 28 C C28 9ML . . . B 2 -40.368 -0.538 -9.85 1 38.5 ? C28 9ML 600 A 1 HETATM 29 C C23 9ML . . . B 2 -35.309 4.125 -9.033 1 22.19 ? C23 9ML 600 A 1 HETATM 30 C C1 9ML . . . B 2 -34 4.556 -8.673 1 21.1 ? C1 9ML 600 A 1 HETATM 31 C C22 9ML . . . B 2 -36.998 1.303 -5.748 1 24.75 ? C22 9ML 600 A 1 HETATM 32 C C16 9ML . . . B 2 -32.311 0.783 -3.997 1 26.27 ? C16 9ML 600 A 1 # _model_server_stats.io_time_ms 114 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 32 #