data_5ZZ0 # _model_server_result.job_id LKEfcnn1SXB3a7hPg0DiBg _model_server_result.datetime_utc '2024-11-21 18:08:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5zz0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 5ZZ0 # _exptl.entry_id 5ZZ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5ZZ0 _cell.length_a 35.393 _cell.length_b 63.566 _cell.length_c 98.136 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5ZZ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 38 G GLY 65 1_555 D CA CA . G CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc2 A OD1 ASP 39 G ASP 66 1_555 D CA CA . G CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc3 A OE1 GLU 70 G GLU 97 1_555 D CA CA . G CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? metalc ? metalc4 A OE2 GLU 70 G GLU 97 1_555 D CA CA . G CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? metalc ? metalc5 A OD1 ASP 82 G ASP 109 1_555 C CA CA . G CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.722 ? metalc ? metalc6 A OD2 ASP 82 G ASP 109 1_555 C CA CA . G CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.656 ? metalc ? metalc7 A O GLY 87 G GLY 114 1_555 C CA CA . G CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? metalc ? metalc8 A O ALA 89 G ALA 116 1_555 C CA CA . G CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? metalc ? metalc9 A O VAL 118 G VAL 145 1_555 D CA CA . G CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc10 B O GLY 38 A GLY 65 1_555 G CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.78 ? metalc ? metalc11 B OE1 GLU 70 A GLU 97 1_555 G CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.879 ? metalc ? metalc12 B OE2 GLU 70 A GLU 97 1_555 G CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc13 B OD1 ASP 82 A ASP 109 1_555 F CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.859 ? metalc ? metalc14 B OD2 ASP 82 A ASP 109 1_555 F CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc15 B O ALA 89 A ALA 116 1_555 F CA CA . A CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc16 B O VAL 118 A VAL 145 1_555 G CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5ZZ0 _atom_sites.fract_transf_matrix[1][1] 0.028254 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015732 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01019 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA G 1 201 201 CA CA . D 2 CA G 1 202 202 CA CA . E 3 PG0 G 1 203 203 PG0 PG0 . F 2 CA A 1 201 201 CA CA . G 2 CA A 1 202 202 CA CA . H 4 HOH G 1 301 301 HOH HOH . H 4 HOH G 2 302 302 HOH HOH . H 4 HOH G 3 303 303 HOH HOH . H 4 HOH G 4 304 304 HOH HOH . H 4 HOH G 5 305 305 HOH HOH . H 4 HOH G 6 306 306 HOH HOH . I 4 HOH A 1 301 303 HOH HOH . I 4 HOH A 2 302 302 HOH HOH . I 4 HOH A 3 303 301 HOH HOH . I 4 HOH A 4 304 304 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 4.336 _atom_site.Cartn_y 10.629 _atom_site.Cartn_z 12.961 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 70.18 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 202 _atom_site.auth_asym_id G _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #