data_6A0F # _model_server_result.job_id ZwIXzKZmTDyckjbpSzxPDQ _model_server_result.datetime_utc '2025-02-05 04:53:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6a0f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":402}' # _entry.id 6A0F # _exptl.entry_id 6A0F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6A0F _cell.length_a 84.045 _cell.length_b 85.749 _cell.length_c 88.297 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6A0F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,Z,BA 1 1 B,D,S,T,U,V,W,X,Y,AA,CA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 118 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 118 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 118 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 118 _struct_conn.ptnr2_symmetry 3_554 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.031 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 6A0F _atom_sites.fract_transf_matrix[1][1] 0.011898 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011662 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011325 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL A 1 401 1 GOL GOL . F 3 GOL A 1 402 2 GOL GOL . G 3 GOL A 1 403 3 GOL GOL . H 3 GOL A 1 404 4 GOL GOL . I 3 GOL A 1 405 5 GOL GOL . J 3 GOL A 1 406 7 GOL GOL . K 3 GOL A 1 407 8 GOL GOL . L 3 GOL A 1 408 10 GOL GOL . M 3 GOL A 1 409 11 GOL GOL . N 4 PO4 A 1 410 21 PO4 PO4 . O 4 PO4 A 1 411 22 PO4 PO4 . P 4 PO4 A 1 412 23 PO4 PO4 . Q 4 PO4 A 1 413 24 PO4 PO4 . R 4 PO4 A 1 414 25 PO4 PO4 . S 3 GOL B 1 401 9 GOL GOL . T 3 GOL B 1 402 12 GOL GOL . U 3 GOL B 1 403 13 GOL GOL . V 3 GOL B 1 404 14 GOL GOL . W 4 PO4 B 1 405 26 PO4 PO4 . X 4 PO4 B 1 406 27 PO4 PO4 . Y 4 PO4 B 1 407 28 PO4 PO4 . Z 5 HOH A 1 501 205 HOH HOH . Z 5 HOH A 2 502 73 HOH HOH . Z 5 HOH A 3 503 164 HOH HOH . Z 5 HOH A 4 504 184 HOH HOH . Z 5 HOH A 5 505 147 HOH HOH . Z 5 HOH A 6 506 193 HOH HOH . Z 5 HOH A 7 507 43 HOH HOH . Z 5 HOH A 8 508 149 HOH HOH . Z 5 HOH A 9 509 53 HOH HOH . Z 5 HOH A 10 510 24 HOH HOH . Z 5 HOH A 11 511 234 HOH HOH . Z 5 HOH A 12 512 197 HOH HOH . Z 5 HOH A 13 513 8 HOH HOH . Z 5 HOH A 14 514 159 HOH HOH . Z 5 HOH A 15 515 103 HOH HOH . Z 5 HOH A 16 516 76 HOH HOH . Z 5 HOH A 17 517 100 HOH HOH . Z 5 HOH A 18 518 166 HOH HOH . Z 5 HOH A 19 519 91 HOH HOH . Z 5 HOH A 20 520 153 HOH HOH . Z 5 HOH A 21 521 157 HOH HOH . Z 5 HOH A 22 522 146 HOH HOH . Z 5 HOH A 23 523 143 HOH HOH . Z 5 HOH A 24 524 218 HOH HOH . Z 5 HOH A 25 525 37 HOH HOH . Z 5 HOH A 26 526 12 HOH HOH . Z 5 HOH A 27 527 9 HOH HOH . Z 5 HOH A 28 528 29 HOH HOH . Z 5 HOH A 29 529 22 HOH HOH . Z 5 HOH A 30 530 142 HOH HOH . Z 5 HOH A 31 531 126 HOH HOH . Z 5 HOH A 32 532 90 HOH HOH . Z 5 HOH A 33 533 237 HOH HOH . Z 5 HOH A 34 534 2 HOH HOH . Z 5 HOH A 35 535 223 HOH HOH . Z 5 HOH A 36 536 71 HOH HOH . Z 5 HOH A 37 537 39 HOH HOH . Z 5 HOH A 38 538 7 HOH HOH . Z 5 HOH A 39 539 5 HOH HOH . Z 5 HOH A 40 540 45 HOH HOH . Z 5 HOH A 41 541 20 HOH HOH . Z 5 HOH A 42 542 56 HOH HOH . Z 5 HOH A 43 543 241 HOH HOH . Z 5 HOH A 44 544 54 HOH HOH . Z 5 HOH A 45 545 119 HOH HOH . Z 5 HOH A 46 546 30 HOH HOH . Z 5 HOH A 47 547 78 HOH HOH . Z 5 HOH A 48 548 65 HOH HOH . Z 5 HOH A 49 549 27 HOH HOH . Z 5 HOH A 50 550 102 HOH HOH . Z 5 HOH A 51 551 61 HOH HOH . Z 5 HOH A 52 552 239 HOH HOH . Z 5 HOH A 53 553 117 HOH HOH . Z 5 HOH A 54 554 92 HOH HOH . Z 5 HOH A 55 555 96 HOH HOH . Z 5 HOH A 56 556 168 HOH HOH . Z 5 HOH A 57 557 19 HOH HOH . Z 5 HOH A 58 558 46 HOH HOH . Z 5 HOH A 59 559 42 HOH HOH . Z 5 HOH A 60 560 95 HOH HOH . Z 5 HOH A 61 561 84 HOH HOH . Z 5 HOH A 62 562 203 HOH HOH . Z 5 HOH A 63 563 181 HOH HOH . Z 5 HOH A 64 564 4 HOH HOH . Z 5 HOH A 65 565 31 HOH HOH . Z 5 HOH A 66 566 134 HOH HOH . Z 5 HOH A 67 567 35 HOH HOH . Z 5 HOH A 68 568 3 HOH HOH . Z 5 HOH A 69 569 64 HOH HOH . Z 5 HOH A 70 570 180 HOH HOH . Z 5 HOH A 71 571 52 HOH HOH . Z 5 HOH A 72 572 28 HOH HOH . Z 5 HOH A 73 573 26 HOH HOH . Z 5 HOH A 74 574 124 HOH HOH . Z 5 HOH A 75 575 1 HOH HOH . Z 5 HOH A 76 576 6 HOH HOH . Z 5 HOH A 77 577 99 HOH HOH . Z 5 HOH A 78 578 225 HOH HOH . Z 5 HOH A 79 579 199 HOH HOH . Z 5 HOH A 80 580 36 HOH HOH . Z 5 HOH A 81 581 11 HOH HOH . Z 5 HOH A 82 582 14 HOH HOH . Z 5 HOH A 83 583 34 HOH HOH . Z 5 HOH A 84 584 74 HOH HOH . Z 5 HOH A 85 585 51 HOH HOH . Z 5 HOH A 86 586 116 HOH HOH . Z 5 HOH A 87 587 63 HOH HOH . Z 5 HOH A 88 588 79 HOH HOH . Z 5 HOH A 89 589 70 HOH HOH . Z 5 HOH A 90 590 87 HOH HOH . Z 5 HOH A 91 591 206 HOH HOH . Z 5 HOH A 92 592 129 HOH HOH . Z 5 HOH A 93 593 40 HOH HOH . Z 5 HOH A 94 594 224 HOH HOH . Z 5 HOH A 95 595 17 HOH HOH . Z 5 HOH A 96 596 97 HOH HOH . Z 5 HOH A 97 597 32 HOH HOH . Z 5 HOH A 98 598 55 HOH HOH . Z 5 HOH A 99 599 38 HOH HOH . Z 5 HOH A 100 600 118 HOH HOH . Z 5 HOH A 101 601 49 HOH HOH . Z 5 HOH A 102 602 81 HOH HOH . Z 5 HOH A 103 603 110 HOH HOH . Z 5 HOH A 104 604 105 HOH HOH . Z 5 HOH A 105 605 141 HOH HOH . Z 5 HOH A 106 606 21 HOH HOH . Z 5 HOH A 107 607 67 HOH HOH . Z 5 HOH A 108 608 148 HOH HOH . Z 5 HOH A 109 609 123 HOH HOH . Z 5 HOH A 110 610 229 HOH HOH . Z 5 HOH A 111 611 101 HOH HOH . Z 5 HOH A 112 612 163 HOH HOH . Z 5 HOH A 113 613 198 HOH HOH . Z 5 HOH A 114 614 177 HOH HOH . Z 5 HOH A 115 615 137 HOH HOH . Z 5 HOH A 116 616 214 HOH HOH . Z 5 HOH A 117 617 232 HOH HOH . Z 5 HOH A 118 618 167 HOH HOH . Z 5 HOH A 119 619 185 HOH HOH . Z 5 HOH A 120 620 125 HOH HOH . Z 5 HOH A 121 621 216 HOH HOH . Z 5 HOH A 122 622 135 HOH HOH . Z 5 HOH A 123 623 238 HOH HOH . Z 5 HOH A 124 624 211 HOH HOH . Z 5 HOH A 125 625 122 HOH HOH . Z 5 HOH A 126 626 213 HOH HOH . Z 5 HOH A 127 627 230 HOH HOH . Z 5 HOH A 128 628 172 HOH HOH . Z 5 HOH A 129 629 136 HOH HOH . Z 5 HOH A 130 630 150 HOH HOH . Z 5 HOH A 131 631 208 HOH HOH . Z 5 HOH A 132 632 106 HOH HOH . Z 5 HOH A 133 633 127 HOH HOH . Z 5 HOH A 134 634 231 HOH HOH . Z 5 HOH A 135 635 215 HOH HOH . AA 5 HOH B 1 501 192 HOH HOH . AA 5 HOH B 2 502 108 HOH HOH . AA 5 HOH B 3 503 66 HOH HOH . AA 5 HOH B 4 504 188 HOH HOH . AA 5 HOH B 5 505 219 HOH HOH . AA 5 HOH B 6 506 209 HOH HOH . AA 5 HOH B 7 507 77 HOH HOH . AA 5 HOH B 8 508 183 HOH HOH . AA 5 HOH B 9 509 111 HOH HOH . AA 5 HOH B 10 510 23 HOH HOH . AA 5 HOH B 11 511 16 HOH HOH . AA 5 HOH B 12 512 201 HOH HOH . AA 5 HOH B 13 513 75 HOH HOH . AA 5 HOH B 14 514 158 HOH HOH . AA 5 HOH B 15 515 240 HOH HOH . AA 5 HOH B 16 516 57 HOH HOH . AA 5 HOH B 17 517 72 HOH HOH . AA 5 HOH B 18 518 15 HOH HOH . AA 5 HOH B 19 519 217 HOH HOH . AA 5 HOH B 20 520 59 HOH HOH . AA 5 HOH B 21 521 243 HOH HOH . AA 5 HOH B 22 522 83 HOH HOH . AA 5 HOH B 23 523 222 HOH HOH . AA 5 HOH B 24 524 13 HOH HOH . AA 5 HOH B 25 525 93 HOH HOH . AA 5 HOH B 26 526 88 HOH HOH . AA 5 HOH B 27 527 44 HOH HOH . AA 5 HOH B 28 528 190 HOH HOH . AA 5 HOH B 29 529 113 HOH HOH . AA 5 HOH B 30 530 165 HOH HOH . AA 5 HOH B 31 531 10 HOH HOH . AA 5 HOH B 32 532 82 HOH HOH . AA 5 HOH B 33 533 50 HOH HOH . AA 5 HOH B 34 534 220 HOH HOH . AA 5 HOH B 35 535 139 HOH HOH . AA 5 HOH B 36 536 18 HOH HOH . AA 5 HOH B 37 537 25 HOH HOH . AA 5 HOH B 38 538 68 HOH HOH . AA 5 HOH B 39 539 69 HOH HOH . AA 5 HOH B 40 540 47 HOH HOH . AA 5 HOH B 41 541 62 HOH HOH . AA 5 HOH B 42 542 194 HOH HOH . AA 5 HOH B 43 543 160 HOH HOH . AA 5 HOH B 44 544 175 HOH HOH . AA 5 HOH B 45 545 169 HOH HOH . AA 5 HOH B 46 546 144 HOH HOH . AA 5 HOH B 47 547 48 HOH HOH . AA 5 HOH B 48 548 187 HOH HOH . AA 5 HOH B 49 549 60 HOH HOH . AA 5 HOH B 50 550 33 HOH HOH . AA 5 HOH B 51 551 133 HOH HOH . AA 5 HOH B 52 552 94 HOH HOH . AA 5 HOH B 53 553 202 HOH HOH . AA 5 HOH B 54 554 196 HOH HOH . AA 5 HOH B 55 555 161 HOH HOH . AA 5 HOH B 56 556 107 HOH HOH . AA 5 HOH B 57 557 58 HOH HOH . AA 5 HOH B 58 558 227 HOH HOH . AA 5 HOH B 59 559 85 HOH HOH . AA 5 HOH B 60 560 131 HOH HOH . AA 5 HOH B 61 561 186 HOH HOH . AA 5 HOH B 62 562 80 HOH HOH . AA 5 HOH B 63 563 89 HOH HOH . AA 5 HOH B 64 564 154 HOH HOH . AA 5 HOH B 65 565 200 HOH HOH . AA 5 HOH B 66 566 171 HOH HOH . AA 5 HOH B 67 567 242 HOH HOH . AA 5 HOH B 68 568 112 HOH HOH . AA 5 HOH B 69 569 114 HOH HOH . AA 5 HOH B 70 570 152 HOH HOH . AA 5 HOH B 71 571 132 HOH HOH . AA 5 HOH B 72 572 204 HOH HOH . AA 5 HOH B 73 573 115 HOH HOH . AA 5 HOH B 74 574 155 HOH HOH . AA 5 HOH B 75 575 151 HOH HOH . AA 5 HOH B 76 576 156 HOH HOH . AA 5 HOH B 77 577 98 HOH HOH . AA 5 HOH B 78 578 109 HOH HOH . AA 5 HOH B 79 579 138 HOH HOH . AA 5 HOH B 80 580 176 HOH HOH . BA 5 HOH C 1 101 228 HOH HOH . BA 5 HOH C 2 102 128 HOH HOH . CA 5 HOH D 1 101 145 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . T 3 -15.744 12.726 -44.895 1 68.89 ? C1 GOL 402 B 1 HETATM 2 O O1 GOL . . . T 3 -15.064 13.652 -45.712 1 71.04 ? O1 GOL 402 B 1 HETATM 3 C C2 GOL . . . T 3 -16.886 13.43 -44.17 1 73.32 ? C2 GOL 402 B 1 HETATM 4 O O2 GOL . . . T 3 -17.203 14.631 -44.839 1 81.03 ? O2 GOL 402 B 1 HETATM 5 C C3 GOL . . . T 3 -18.111 12.525 -44.137 1 70.31 ? C3 GOL 402 B 1 HETATM 6 O O3 GOL . . . T 3 -19.159 13.178 -43.455 1 70.93 ? O3 GOL 402 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 6 #