data_6A2U # _model_server_result.job_id j6k_ekomvEXDLU7Bgr8T3A _model_server_result.datetime_utc '2024-10-18 16:28:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6a2u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":702}' # _entry.id 6A2U # _exptl.entry_id 6A2U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 295.795 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE3-S4 CLUSTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6A2U _cell.length_a 110.521 _cell.length_b 110.521 _cell.length_c 524.877 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6A2U _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 105 A CYS 152 1_555 B SG CYS 213 B CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 C SG CYS 105 C CYS 152 1_555 D SG CYS 213 D CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 B NE2 HIS 105 B HIS 105 1_555 E C8M FAD . B FAD 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.471 ? covale ? covale2 D NE2 HIS 105 D HIS 105 1_555 G C8M FAD . D FAD 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.483 ? metalc ? metalc1 B SG CYS 212 B CYS 212 1_555 F FE1 F3S . B F3S 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc2 B SG CYS 218 B CYS 218 1_555 F FE4 F3S . B F3S 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc3 B SG CYS 222 B CYS 222 1_555 F FE3 F3S . B F3S 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc4 D SG CYS 212 D CYS 212 1_555 H FE1 F3S . D F3S 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc5 D SG CYS 218 D CYS 218 1_555 H FE4 F3S . D F3S 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc6 D SG CYS 222 D CYS 222 1_555 H FE3 F3S . D F3S 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? # _chem_comp.formula 'Fe3 S4' _chem_comp.formula_weight 295.795 _chem_comp.id F3S _chem_comp.mon_nstd_flag . _chem_comp.name 'FE3-S4 CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S1 F3S sing 83 n n FE1 S2 F3S sing 84 n n FE1 S3 F3S sing 85 n n FE3 S1 F3S sing 86 n n FE3 S3 F3S sing 87 n n FE3 S4 F3S sing 88 n n FE4 S2 F3S sing 89 n n FE4 S3 F3S sing 90 n n FE4 S4 F3S sing 91 n n # _atom_sites.entry_id 6A2U _atom_sites.fract_transf_matrix[1][1] 0.009048 _atom_sites.fract_transf_matrix[1][2] 0.005224 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010448 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001905 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 FAD B 1 701 701 FAD FAD . F 4 F3S B 1 702 1 F3S F3S . G 3 FAD D 1 701 701 FAD FAD . H 4 F3S D 1 702 2 F3S F3S . I 5 HOH A 1 201 162 HOH HOH . I 5 HOH A 2 202 8 HOH HOH . I 5 HOH A 3 203 125 HOH HOH . I 5 HOH A 4 204 36 HOH HOH . I 5 HOH A 5 205 105 HOH HOH . I 5 HOH A 6 206 134 HOH HOH . I 5 HOH A 7 207 150 HOH HOH . J 5 HOH B 1 801 68 HOH HOH . J 5 HOH B 2 802 118 HOH HOH . J 5 HOH B 3 803 156 HOH HOH . J 5 HOH B 4 804 170 HOH HOH . J 5 HOH B 5 805 83 HOH HOH . J 5 HOH B 6 806 75 HOH HOH . J 5 HOH B 7 807 21 HOH HOH . J 5 HOH B 8 808 135 HOH HOH . J 5 HOH B 9 809 71 HOH HOH . J 5 HOH B 10 810 122 HOH HOH . J 5 HOH B 11 811 18 HOH HOH . J 5 HOH B 12 812 113 HOH HOH . J 5 HOH B 13 813 161 HOH HOH . J 5 HOH B 14 814 61 HOH HOH . J 5 HOH B 15 815 129 HOH HOH . J 5 HOH B 16 816 89 HOH HOH . J 5 HOH B 17 817 19 HOH HOH . J 5 HOH B 18 818 84 HOH HOH . J 5 HOH B 19 819 95 HOH HOH . J 5 HOH B 20 820 167 HOH HOH . J 5 HOH B 21 821 76 HOH HOH . J 5 HOH B 22 822 24 HOH HOH . J 5 HOH B 23 823 65 HOH HOH . J 5 HOH B 24 824 120 HOH HOH . J 5 HOH B 25 825 55 HOH HOH . J 5 HOH B 26 826 2 HOH HOH . J 5 HOH B 27 827 82 HOH HOH . J 5 HOH B 28 828 63 HOH HOH . J 5 HOH B 29 829 12 HOH HOH . J 5 HOH B 30 830 171 HOH HOH . J 5 HOH B 31 831 44 HOH HOH . J 5 HOH B 32 832 158 HOH HOH . J 5 HOH B 33 833 152 HOH HOH . J 5 HOH B 34 834 121 HOH HOH . J 5 HOH B 35 835 139 HOH HOH . J 5 HOH B 36 836 47 HOH HOH . J 5 HOH B 37 837 20 HOH HOH . J 5 HOH B 38 838 154 HOH HOH . J 5 HOH B 39 839 35 HOH HOH . J 5 HOH B 40 840 100 HOH HOH . J 5 HOH B 41 841 9 HOH HOH . J 5 HOH B 42 842 108 HOH HOH . J 5 HOH B 43 843 86 HOH HOH . J 5 HOH B 44 844 93 HOH HOH . J 5 HOH B 45 845 140 HOH HOH . J 5 HOH B 46 846 155 HOH HOH . J 5 HOH B 47 847 160 HOH HOH . J 5 HOH B 48 848 117 HOH HOH . J 5 HOH B 49 849 147 HOH HOH . J 5 HOH B 50 850 110 HOH HOH . J 5 HOH B 51 851 78 HOH HOH . J 5 HOH B 52 852 96 HOH HOH . J 5 HOH B 53 853 166 HOH HOH . J 5 HOH B 54 854 148 HOH HOH . J 5 HOH B 55 855 92 HOH HOH . J 5 HOH B 56 856 87 HOH HOH . J 5 HOH B 57 857 41 HOH HOH . J 5 HOH B 58 858 10 HOH HOH . J 5 HOH B 59 859 64 HOH HOH . J 5 HOH B 60 860 149 HOH HOH . J 5 HOH B 61 861 33 HOH HOH . J 5 HOH B 62 862 38 HOH HOH . J 5 HOH B 63 863 13 HOH HOH . J 5 HOH B 64 864 70 HOH HOH . J 5 HOH B 65 865 143 HOH HOH . J 5 HOH B 66 866 144 HOH HOH . J 5 HOH B 67 867 97 HOH HOH . J 5 HOH B 68 868 11 HOH HOH . J 5 HOH B 69 869 165 HOH HOH . J 5 HOH B 70 870 107 HOH HOH . J 5 HOH B 71 871 1 HOH HOH . J 5 HOH B 72 872 29 HOH HOH . J 5 HOH B 73 873 74 HOH HOH . J 5 HOH B 74 874 111 HOH HOH . J 5 HOH B 75 875 23 HOH HOH . J 5 HOH B 76 876 43 HOH HOH . J 5 HOH B 77 877 126 HOH HOH . J 5 HOH B 78 878 49 HOH HOH . J 5 HOH B 79 879 50 HOH HOH . J 5 HOH B 80 880 101 HOH HOH . J 5 HOH B 81 881 114 HOH HOH . K 5 HOH C 1 201 80 HOH HOH . K 5 HOH C 2 202 39 HOH HOH . K 5 HOH C 3 203 159 HOH HOH . K 5 HOH C 4 204 131 HOH HOH . K 5 HOH C 5 205 169 HOH HOH . K 5 HOH C 6 206 42 HOH HOH . K 5 HOH C 7 207 90 HOH HOH . K 5 HOH C 8 208 46 HOH HOH . K 5 HOH C 9 209 99 HOH HOH . L 5 HOH D 1 801 176 HOH HOH . L 5 HOH D 2 802 17 HOH HOH . L 5 HOH D 3 803 102 HOH HOH . L 5 HOH D 4 804 132 HOH HOH . L 5 HOH D 5 805 62 HOH HOH . L 5 HOH D 6 806 115 HOH HOH . L 5 HOH D 7 807 157 HOH HOH . L 5 HOH D 8 808 52 HOH HOH . L 5 HOH D 9 809 26 HOH HOH . L 5 HOH D 10 810 6 HOH HOH . L 5 HOH D 11 811 133 HOH HOH . L 5 HOH D 12 812 77 HOH HOH . L 5 HOH D 13 813 3 HOH HOH . L 5 HOH D 14 814 31 HOH HOH . L 5 HOH D 15 815 53 HOH HOH . L 5 HOH D 16 816 5 HOH HOH . L 5 HOH D 17 817 45 HOH HOH . L 5 HOH D 18 818 116 HOH HOH . L 5 HOH D 19 819 37 HOH HOH . L 5 HOH D 20 820 123 HOH HOH . L 5 HOH D 21 821 73 HOH HOH . L 5 HOH D 22 822 106 HOH HOH . L 5 HOH D 23 823 88 HOH HOH . L 5 HOH D 24 824 79 HOH HOH . L 5 HOH D 25 825 137 HOH HOH . L 5 HOH D 26 826 94 HOH HOH . L 5 HOH D 27 827 136 HOH HOH . L 5 HOH D 28 828 151 HOH HOH . L 5 HOH D 29 829 4 HOH HOH . L 5 HOH D 30 830 81 HOH HOH . L 5 HOH D 31 831 127 HOH HOH . L 5 HOH D 32 832 128 HOH HOH . L 5 HOH D 33 833 175 HOH HOH . L 5 HOH D 34 834 124 HOH HOH . L 5 HOH D 35 835 72 HOH HOH . L 5 HOH D 36 836 153 HOH HOH . L 5 HOH D 37 837 7 HOH HOH . L 5 HOH D 38 838 59 HOH HOH . L 5 HOH D 39 839 16 HOH HOH . L 5 HOH D 40 840 30 HOH HOH . L 5 HOH D 41 841 112 HOH HOH . L 5 HOH D 42 842 173 HOH HOH . L 5 HOH D 43 843 32 HOH HOH . L 5 HOH D 44 844 27 HOH HOH . L 5 HOH D 45 845 28 HOH HOH . L 5 HOH D 46 846 34 HOH HOH . L 5 HOH D 47 847 66 HOH HOH . L 5 HOH D 48 848 138 HOH HOH . L 5 HOH D 49 849 25 HOH HOH . L 5 HOH D 50 850 130 HOH HOH . L 5 HOH D 51 851 54 HOH HOH . L 5 HOH D 52 852 60 HOH HOH . L 5 HOH D 53 853 58 HOH HOH . L 5 HOH D 54 854 69 HOH HOH . L 5 HOH D 55 855 168 HOH HOH . L 5 HOH D 56 856 15 HOH HOH . L 5 HOH D 57 857 48 HOH HOH . L 5 HOH D 58 858 104 HOH HOH . L 5 HOH D 59 859 146 HOH HOH . L 5 HOH D 60 860 85 HOH HOH . L 5 HOH D 61 861 67 HOH HOH . L 5 HOH D 62 862 109 HOH HOH . L 5 HOH D 63 863 22 HOH HOH . L 5 HOH D 64 864 51 HOH HOH . L 5 HOH D 65 865 40 HOH HOH . L 5 HOH D 66 866 56 HOH HOH . L 5 HOH D 67 867 57 HOH HOH . L 5 HOH D 68 868 163 HOH HOH . L 5 HOH D 69 869 91 HOH HOH . L 5 HOH D 70 870 141 HOH HOH . L 5 HOH D 71 871 119 HOH HOH . L 5 HOH D 72 872 145 HOH HOH . L 5 HOH D 73 873 98 HOH HOH . L 5 HOH D 74 874 142 HOH HOH . L 5 HOH D 75 875 174 HOH HOH . L 5 HOH D 76 876 14 HOH HOH . L 5 HOH D 77 877 164 HOH HOH . L 5 HOH D 78 878 103 HOH HOH . L 5 HOH D 79 879 172 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 F3S . . . H 4 55.457 75.578 258.569 1 27.87 ? FE1 F3S 702 D 1 HETATM 2 FE FE3 F3S . . . H 4 56.993 75.752 256.019 1 35.34 ? FE3 F3S 702 D 1 HETATM 3 FE FE4 F3S . . . H 4 55.445 73.282 256.683 1 29.1 ? FE4 F3S 702 D 1 HETATM 4 S S1 F3S . . . H 4 56.307 77.276 257.458 1 35.92 ? S1 F3S 702 D 1 HETATM 5 S S2 F3S . . . H 4 54.064 73.908 258.276 1 28.09 ? S2 F3S 702 D 1 HETATM 6 S S3 F3S . . . H 4 57.054 74.359 257.704 1 28.26 ? S3 F3S 702 D 1 HETATM 7 S S4 F3S . . . H 4 56.228 74.089 254.793 1 35.36 ? S4 F3S 702 D 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #