data_6A3I
#
_model_server_result.job_id            Iwa-s-MjqZbR8I5GGWjaWA 
_model_server_result.datetime_utc      '2024-11-24 22:34:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6a3i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":401}' 
#
_entry.id    6A3I 
#
_exptl.entry_id    6A3I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              665.441 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.48 
_cell.angle_gamma         90 
_cell.entry_id            6A3I 
_cell.length_a            76.725 
_cell.length_b            92.354 
_cell.length_c            100.563 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6A3I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 H N N 
#
_chem_comp.formula           'C21 H29 N7 O14 P2' 
_chem_comp.formula_weight    665.441 
_chem_comp.id                NAI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     NADH 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAI doub 259 n n 
PA O2A NAI sing 260 n n 
PA O5B NAI sing 261 n n 
PA O3 NAI sing 262 n n 
O2A HOA2 NAI sing 263 n n 
O5B C5B NAI sing 264 n n 
C5B C4B NAI sing 265 n n 
C5B H51A NAI sing 266 n n 
C5B H52A NAI sing 267 n n 
C4B O4B NAI sing 268 n n 
C4B C3B NAI sing 269 n n 
C4B H4B NAI sing 270 n n 
O4B C1B NAI sing 271 n n 
C3B O3B NAI sing 272 n n 
C3B C2B NAI sing 273 n n 
C3B H3B NAI sing 274 n n 
O3B HO3A NAI sing 275 n n 
C2B O2B NAI sing 276 n n 
C2B C1B NAI sing 277 n n 
C2B H2B NAI sing 278 n n 
O2B HO2A NAI sing 279 n n 
C1B N9A NAI sing 280 n n 
C1B H1B NAI sing 281 n n 
N9A C8A NAI sing 282 n y 
N9A C4A NAI sing 283 n y 
C8A N7A NAI doub 284 n y 
C8A H8A NAI sing 285 n n 
N7A C5A NAI sing 286 n y 
C5A C6A NAI sing 287 n y 
C5A C4A NAI doub 288 n y 
C6A N6A NAI sing 289 n n 
C6A N1A NAI doub 290 n y 
N6A H61A NAI sing 291 n n 
N6A H62A NAI sing 292 n n 
N1A C2A NAI sing 293 n y 
C2A N3A NAI doub 294 n y 
C2A H2A NAI sing 295 n n 
N3A C4A NAI sing 296 n y 
O3 PN NAI sing 297 n n 
PN O1N NAI sing 298 n n 
PN O2N NAI doub 299 n n 
PN O5D NAI sing 300 n n 
O1N HO1N NAI sing 301 n n 
O5D C5D NAI sing 302 n n 
C5D C4D NAI sing 303 n n 
C5D H51N NAI sing 304 n n 
C5D H52N NAI sing 305 n n 
C4D O4D NAI sing 306 n n 
C4D C3D NAI sing 307 n n 
C4D H4D NAI sing 308 n n 
O4D C1D NAI sing 309 n n 
C3D O3D NAI sing 310 n n 
C3D C2D NAI sing 311 n n 
C3D H3D NAI sing 312 n n 
O3D HO3N NAI sing 313 n n 
C2D O2D NAI sing 314 n n 
C2D C1D NAI sing 315 n n 
C2D H2D NAI sing 316 n n 
O2D HO2N NAI sing 317 n n 
C1D N1N NAI sing 318 n n 
C1D H1D NAI sing 319 n n 
N1N C2N NAI sing 320 n n 
N1N C6N NAI sing 321 n n 
C2N C3N NAI doub 322 n n 
C2N H2N NAI sing 323 n n 
C3N C7N NAI sing 324 n n 
C3N C4N NAI sing 325 n n 
C7N O7N NAI doub 326 n n 
C7N N7N NAI sing 327 n n 
N7N H71N NAI sing 328 n n 
N7N H72N NAI sing 329 n n 
C4N C5N NAI sing 330 n n 
C4N H4N NAI sing 331 n n 
C4N H42N NAI sing 332 n n 
C5N C6N NAI doub 333 n n 
C5N H5N NAI sing 334 n n 
C6N H6N NAI sing 335 n n 
#
_atom_sites.entry_id                     6A3I 
_atom_sites.fract_transf_matrix[1][1]    0.013034 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003366 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010828 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01027 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 4PW A 1 401 401 4PW 4PW . 
F 3 NAI A 1 402 1 NAI NAD . 
G 3 NAI B 1 401 2 NAI NAD . 
H 3 NAI C 1 401 3 NAI NAD . 
I 2 4PW D 1 401 401 4PW 4PW . 
J 4 HOH A 1 501 7 HOH HOH . 
J 4 HOH A 2 502 4 HOH HOH . 
J 4 HOH A 3 503 31 HOH HOH . 
J 4 HOH A 4 504 23 HOH HOH . 
J 4 HOH A 5 505 22 HOH HOH . 
J 4 HOH A 6 506 11 HOH HOH . 
J 4 HOH A 7 507 14 HOH HOH . 
J 4 HOH A 8 508 34 HOH HOH . 
J 4 HOH A 9 509 61 HOH HOH . 
J 4 HOH A 10 510 39 HOH HOH . 
J 4 HOH A 11 511 58 HOH HOH . 
J 4 HOH A 12 512 26 HOH HOH . 
J 4 HOH A 13 513 13 HOH HOH . 
J 4 HOH A 14 514 37 HOH HOH . 
J 4 HOH A 15 515 9 HOH HOH . 
J 4 HOH A 16 516 15 HOH HOH . 
J 4 HOH A 17 517 38 HOH HOH . 
J 4 HOH A 18 518 41 HOH HOH . 
J 4 HOH A 19 519 25 HOH HOH . 
J 4 HOH A 20 520 2 HOH HOH . 
J 4 HOH A 21 521 18 HOH HOH . 
J 4 HOH A 22 522 8 HOH HOH . 
J 4 HOH A 23 523 47 HOH HOH . 
J 4 HOH A 24 524 32 HOH HOH . 
J 4 HOH A 25 525 28 HOH HOH . 
J 4 HOH A 26 526 24 HOH HOH . 
J 4 HOH A 27 527 43 HOH HOH . 
J 4 HOH A 28 528 54 HOH HOH . 
J 4 HOH A 29 529 53 HOH HOH . 
J 4 HOH A 30 530 51 HOH HOH . 
K 4 HOH B 1 501 44 HOH HOH . 
K 4 HOH B 2 502 27 HOH HOH . 
K 4 HOH B 3 503 6 HOH HOH . 
K 4 HOH B 4 504 17 HOH HOH . 
K 4 HOH B 5 505 20 HOH HOH . 
K 4 HOH B 6 506 33 HOH HOH . 
K 4 HOH B 7 507 10 HOH HOH . 
K 4 HOH B 8 508 16 HOH HOH . 
K 4 HOH B 9 509 59 HOH HOH . 
K 4 HOH B 10 510 3 HOH HOH . 
K 4 HOH B 11 511 55 HOH HOH . 
K 4 HOH B 12 512 35 HOH HOH . 
K 4 HOH B 13 513 49 HOH HOH . 
K 4 HOH B 14 514 48 HOH HOH . 
K 4 HOH B 15 515 50 HOH HOH . 
K 4 HOH B 16 516 21 HOH HOH . 
K 4 HOH B 17 517 52 HOH HOH . 
L 4 HOH C 1 501 60 HOH HOH . 
L 4 HOH C 2 502 42 HOH HOH . 
L 4 HOH C 3 503 36 HOH HOH . 
L 4 HOH C 4 504 19 HOH HOH . 
L 4 HOH C 5 505 56 HOH HOH . 
L 4 HOH C 6 506 5 HOH HOH . 
L 4 HOH C 7 507 45 HOH HOH . 
L 4 HOH C 8 508 12 HOH HOH . 
L 4 HOH C 9 509 46 HOH HOH . 
L 4 HOH C 10 510 29 HOH HOH . 
M 4 HOH D 1 501 1 HOH HOH . 
M 4 HOH D 2 502 30 HOH HOH . 
M 4 HOH D 3 503 57 HOH HOH . 
M 4 HOH D 4 504 40 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAI . . . G 3 -0.979 16.725 -44.706 1 69.88 ? PA NAI 401 B 1 
HETATM 2 O O1A NAI . . . G 3 -1.1 16.595 -46.331 1 68.8 ? O1A NAI 401 B 1 
HETATM 3 O O2A NAI . . . G 3 -2.184 17.482 -44.221 1 59.96 ? O2A NAI 401 B 1 
HETATM 4 O O5B NAI . . . G 3 0.408 17.285 -44.42 1 55.32 ? O5B NAI 401 B 1 
HETATM 5 O O3 NAI . . . G 3 -1.176 15.192 -44.172 1 68.03 ? O3 NAI 401 B 1 
HETATM 6 P PN NAI . . . G 3 -0.015 14.219 -43.57 1 62.11 ? PN NAI 401 B 1 
HETATM 7 O O1N NAI . . . G 3 0.15 14.601 -42.12 1 68.4 ? O1N NAI 401 B 1 
HETATM 8 O O2N NAI . . . G 3 1.21 14.264 -44.429 1 60.99 ? O2N NAI 401 B 1 
HETATM 9 O O5D NAI . . . G 3 -0.675 12.752 -43.586 1 59.14 ? O5D NAI 401 B 1 
HETATM 10 C C5D NAI . . . G 3 -0.732 11.838 -44.68 1 55.47 ? C5D NAI 401 B 1 
HETATM 11 C C4D NAI . . . G 3 -1.221 10.461 -44.181 1 53.11 ? C4D NAI 401 B 1 
HETATM 12 O O4D NAI . . . G 3 -0.309 9.876 -43.222 1 52.44 ? O4D NAI 401 B 1 
HETATM 13 C C3D NAI . . . G 3 -2.557 10.515 -43.465 1 53.17 ? C3D NAI 401 B 1 
HETATM 14 O O3D NAI . . . G 3 -3.466 9.555 -44.003 1 57.89 ? O3D NAI 401 B 1 
HETATM 15 C C2D NAI . . . G 3 -2.27 10.225 -41.991 1 51.5 ? C2D NAI 401 B 1 
HETATM 16 O O2D NAI . . . G 3 -3.279 9.367 -41.431 1 52.05 ? O2D NAI 401 B 1 
HETATM 17 C C1D NAI . . . G 3 -0.875 9.626 -41.923 1 46.93 ? C1D NAI 401 B 1 
#
_model_server_stats.io_time_ms              54 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           17 
#