data_6A3L
#
_model_server_result.job_id            XVxNU3LHsfG6Cgier19A0Q 
_model_server_result.datetime_utc      '2024-11-22 19:24:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6a3l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    6A3L 
#
_exptl.entry_id    6A3L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              618.503 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'HEME C' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          112.19 
_cell.angle_gamma         90 
_cell.entry_id            6A3L 
_cell.length_a            44.751 
_cell.length_b            69.707 
_cell.length_c            45.598 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6A3L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 119 A CYS 119 1_555 C CAB HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.77 ? 
covale ? covale2 A SG CYS 122 A CYS 122 1_555 C CAC HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.773 ? 
covale ? covale3 B SG CYS 119 B CYS 119 1_555 D CAB HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.769 ? 
covale ? covale4 B SG CYS 122 B CYS 122 1_555 D CAC HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.774 ? 
metalc ? metalc1 A NE2 HIS 123 A HIS 123 1_555 C FE HEC . A HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? 
metalc ? metalc2 B NE2 HIS 123 B HIS 123 1_555 D FE HEC . B HEC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? 
#
_chem_comp.formula           'C34 H34 Fe N4 O4' 
_chem_comp.formula_weight    618.503 
_chem_comp.id                HEC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'HEME C' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE NA HEC sing 129 n n 
FE NB HEC sing 130 n n 
FE NC HEC sing 131 n n 
FE ND HEC sing 132 n n 
CHA C1A HEC doub 133 n n 
CHA C4D HEC sing 134 n n 
CHA HHA HEC sing 135 n n 
CHB C4A HEC doub 136 n n 
CHB C1B HEC sing 137 n n 
CHB HHB HEC sing 138 n n 
CHC C4B HEC doub 139 n n 
CHC C1C HEC sing 140 n n 
CHC HHC HEC sing 141 n n 
CHD C4C HEC doub 142 n n 
CHD C1D HEC sing 143 n n 
CHD HHD HEC sing 144 n n 
NA C1A HEC sing 145 n y 
NA C4A HEC sing 146 n y 
C1A C2A HEC sing 147 n y 
C2A C3A HEC doub 148 n y 
C2A CAA HEC sing 149 n n 
C3A C4A HEC sing 150 n y 
C3A CMA HEC sing 151 n n 
CMA HMA1 HEC sing 152 n n 
CMA HMA2 HEC sing 153 n n 
CMA HMA3 HEC sing 154 n n 
CAA CBA HEC sing 155 n n 
CAA HAA1 HEC sing 156 n n 
CAA HAA2 HEC sing 157 n n 
CBA CGA HEC sing 158 n n 
CBA HBA1 HEC sing 159 n n 
CBA HBA2 HEC sing 160 n n 
CGA O1A HEC doub 161 n n 
CGA O2A HEC sing 162 n n 
O2A H2A HEC sing 163 n n 
NB C1B HEC sing 164 n y 
NB C4B HEC sing 165 n y 
C1B C2B HEC doub 166 n y 
C2B C3B HEC sing 167 n y 
C2B CMB HEC sing 168 n n 
C3B C4B HEC sing 169 n y 
C3B CAB HEC doub 170 e n 
CMB HMB1 HEC sing 171 n n 
CMB HMB2 HEC sing 172 n n 
CMB HMB3 HEC sing 173 n n 
CAB CBB HEC sing 174 n n 
CAB HAB HEC sing 175 n n 
CBB HBB1 HEC sing 176 n n 
CBB HBB2 HEC sing 177 n n 
CBB HBB3 HEC sing 178 n n 
NC C1C HEC sing 179 n y 
NC C4C HEC sing 180 n y 
C1C C2C HEC doub 181 n y 
C2C C3C HEC sing 182 n y 
C2C CMC HEC sing 183 n n 
C3C C4C HEC sing 184 n y 
C3C CAC HEC doub 185 e n 
CMC HMC1 HEC sing 186 n n 
CMC HMC2 HEC sing 187 n n 
CMC HMC3 HEC sing 188 n n 
CAC CBC HEC sing 189 n n 
CAC HAC HEC sing 190 n n 
CBC HBC1 HEC sing 191 n n 
CBC HBC2 HEC sing 192 n n 
CBC HBC3 HEC sing 193 n n 
ND C1D HEC sing 194 n y 
ND C4D HEC sing 195 n y 
C1D C2D HEC doub 196 n y 
C2D C3D HEC sing 197 n y 
C2D CMD HEC sing 198 n n 
C3D C4D HEC doub 199 n y 
C3D CAD HEC sing 200 n n 
CMD HMD1 HEC sing 201 n n 
CMD HMD2 HEC sing 202 n n 
CMD HMD3 HEC sing 203 n n 
CAD CBD HEC sing 204 n n 
CAD HAD1 HEC sing 205 n n 
CAD HAD2 HEC sing 206 n n 
CBD CGD HEC sing 207 n n 
CBD HBD1 HEC sing 208 n n 
CBD HBD2 HEC sing 209 n n 
CGD O1D HEC doub 210 n n 
CGD O2D HEC sing 211 n n 
O2D H2D HEC sing 212 n n 
#
_atom_sites.entry_id                     6A3L 
_atom_sites.fract_transf_matrix[1][1]    0.022346 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.009115 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014346 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023685 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEC A 1 201 150 HEC HEM . 
D 2 HEC B 1 201 150 HEC HEM . 
E 3 HOH A 1 301 37 HOH HOH . 
E 3 HOH A 2 302 14 HOH HOH . 
E 3 HOH A 3 303 32 HOH HOH . 
E 3 HOH A 4 304 4 HOH HOH . 
E 3 HOH A 5 305 61 HOH HOH . 
E 3 HOH A 6 306 57 HOH HOH . 
E 3 HOH A 7 307 8 HOH HOH . 
E 3 HOH A 8 308 64 HOH HOH . 
E 3 HOH A 9 309 40 HOH HOH . 
E 3 HOH A 10 310 25 HOH HOH . 
E 3 HOH A 11 311 49 HOH HOH . 
E 3 HOH A 12 312 18 HOH HOH . 
E 3 HOH A 13 313 5 HOH HOH . 
E 3 HOH A 14 314 7 HOH HOH . 
E 3 HOH A 15 315 27 HOH HOH . 
E 3 HOH A 16 316 43 HOH HOH . 
E 3 HOH A 17 317 15 HOH HOH . 
E 3 HOH A 18 318 22 HOH HOH . 
E 3 HOH A 19 319 67 HOH HOH . 
E 3 HOH A 20 320 50 HOH HOH . 
E 3 HOH A 21 321 26 HOH HOH . 
E 3 HOH A 22 322 16 HOH HOH . 
E 3 HOH A 23 323 62 HOH HOH . 
E 3 HOH A 24 324 55 HOH HOH . 
E 3 HOH A 25 325 41 HOH HOH . 
E 3 HOH A 26 326 31 HOH HOH . 
E 3 HOH A 27 327 63 HOH HOH . 
E 3 HOH A 28 328 60 HOH HOH . 
E 3 HOH A 29 329 56 HOH HOH . 
E 3 HOH A 30 330 59 HOH HOH . 
E 3 HOH A 31 331 70 HOH HOH . 
E 3 HOH A 32 332 47 HOH HOH . 
E 3 HOH A 33 333 42 HOH HOH . 
E 3 HOH A 34 334 52 HOH HOH . 
E 3 HOH A 35 335 69 HOH HOH . 
F 3 HOH B 1 301 9 HOH HOH . 
F 3 HOH B 2 302 35 HOH HOH . 
F 3 HOH B 3 303 12 HOH HOH . 
F 3 HOH B 4 304 30 HOH HOH . 
F 3 HOH B 5 305 1 HOH HOH . 
F 3 HOH B 6 306 29 HOH HOH . 
F 3 HOH B 7 307 21 HOH HOH . 
F 3 HOH B 8 308 6 HOH HOH . 
F 3 HOH B 9 309 51 HOH HOH . 
F 3 HOH B 10 310 11 HOH HOH . 
F 3 HOH B 11 311 34 HOH HOH . 
F 3 HOH B 12 312 38 HOH HOH . 
F 3 HOH B 13 313 19 HOH HOH . 
F 3 HOH B 14 314 2 HOH HOH . 
F 3 HOH B 15 315 13 HOH HOH . 
F 3 HOH B 16 316 45 HOH HOH . 
F 3 HOH B 17 317 20 HOH HOH . 
F 3 HOH B 18 318 17 HOH HOH . 
F 3 HOH B 19 319 24 HOH HOH . 
F 3 HOH B 20 320 10 HOH HOH . 
F 3 HOH B 21 321 33 HOH HOH . 
F 3 HOH B 22 322 28 HOH HOH . 
F 3 HOH B 23 323 68 HOH HOH . 
F 3 HOH B 24 324 54 HOH HOH . 
F 3 HOH B 25 325 39 HOH HOH . 
F 3 HOH B 26 326 53 HOH HOH . 
F 3 HOH B 27 327 23 HOH HOH . 
F 3 HOH B 28 328 58 HOH HOH . 
F 3 HOH B 29 329 65 HOH HOH . 
F 3 HOH B 30 330 66 HOH HOH . 
F 3 HOH B 31 331 36 HOH HOH . 
F 3 HOH B 32 332 46 HOH HOH . 
F 3 HOH B 33 333 48 HOH HOH . 
F 3 HOH B 34 334 3 HOH HOH . 
F 3 HOH B 35 335 44 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE HEC . . . D 2 -18.003 5.755 28.738 1 37.87 ? FE HEC 201 B 1 
HETATM 2 C CHA HEC . . . D 2 -18.842 3.092 30.832 1 37.3 ? CHA HEC 201 B 1 
HETATM 3 C CHB HEC . . . D 2 -18.734 7.924 31.22 1 34.73 ? CHB HEC 201 B 1 
HETATM 4 C CHC HEC . . . D 2 -16.681 8.352 26.855 1 35.42 ? CHC HEC 201 B 1 
HETATM 5 C CHD HEC . . . D 2 -17.23 3.573 26.288 1 34.97 ? CHD HEC 201 B 1 
HETATM 6 N NA HEC . . . D 2 -18.621 5.53 30.647 1 34.7 ? NA HEC 201 B 1 
HETATM 7 C C1A HEC . . . D 2 -18.95 4.368 31.332 1 34.51 ? C1A HEC 201 B 1 
HETATM 8 C C2A HEC . . . D 2 -19.432 4.737 32.646 1 33 ? C2A HEC 201 B 1 
HETATM 9 C C3A HEC . . . D 2 -19.395 6.057 32.762 1 34.95 ? C3A HEC 201 B 1 
HETATM 10 C C4A HEC . . . D 2 -18.889 6.591 31.509 1 35.6 ? C4A HEC 201 B 1 
HETATM 11 C CMA HEC . . . D 2 -19.81 6.85 34.023 1 35.52 ? CMA HEC 201 B 1 
HETATM 12 C CAA HEC . . . D 2 -19.888 3.789 33.76 1 36.38 ? CAA HEC 201 B 1 
HETATM 13 C CBA HEC . . . D 2 -18.63 3.42 34.521 1 37.47 ? CBA HEC 201 B 1 
HETATM 14 C CGA HEC . . . D 2 -19.046 2.575 35.687 1 42.47 ? CGA HEC 201 B 1 
HETATM 15 O O1A HEC . . . D 2 -19.094 1.328 35.474 1 42.45 ? O1A HEC 201 B 1 
HETATM 16 O O2A HEC . . . D 2 -19.329 3.157 36.786 1 42.12 -1 O2A HEC 201 B 1 
HETATM 17 N NB HEC . . . D 2 -17.725 7.744 28.968 1 30.4 ? NB HEC 201 B 1 
HETATM 18 C C1B HEC . . . D 2 -18.165 8.438 30.085 1 32.36 ? C1B HEC 201 B 1 
HETATM 19 C C2B HEC . . . D 2 -17.93 9.843 29.884 1 34.61 ? C2B HEC 201 B 1 
HETATM 20 C C3B HEC . . . D 2 -17.381 9.995 28.663 1 34.37 ? C3B HEC 201 B 1 
HETATM 21 C C4B HEC . . . D 2 -17.217 8.667 28.083 1 31.25 ? C4B HEC 201 B 1 
HETATM 22 C CMB HEC . . . D 2 -18.328 10.924 30.925 1 38.02 ? CMB HEC 201 B 1 
HETATM 23 C CAB HEC . . . D 2 -16.92 11.332 28.021 1 39.52 ? CAB HEC 201 B 1 
HETATM 24 C CBB HEC . . . D 2 -16.297 12.265 28.777 1 38.92 ? CBB HEC 201 B 1 
HETATM 25 N NC HEC . . . D 2 -17.124 5.936 26.959 1 36.23 ? NC HEC 201 B 1 
HETATM 26 C C1C HEC . . . D 2 -16.678 7.087 26.311 1 36.7 ? C1C HEC 201 B 1 
HETATM 27 C C2C HEC . . . D 2 -16.188 6.718 24.992 1 34.21 ? C2C HEC 201 B 1 
HETATM 28 C C3C HEC . . . D 2 -16.357 5.392 24.851 1 32.94 ? C3C HEC 201 B 1 
HETATM 29 C C4C HEC . . . D 2 -16.933 4.889 26.071 1 34.41 ? C4C HEC 201 B 1 
HETATM 30 C CMC HEC . . . D 2 -15.62 7.724 23.955 1 36.72 ? CMC HEC 201 B 1 
HETATM 31 C CAC HEC . . . D 2 -16.029 4.472 23.641 1 40.38 ? CAC HEC 201 B 1 
HETATM 32 C CBC HEC . . . D 2 -15.197 4.833 22.656 1 38.58 ? CBC HEC 201 B 1 
HETATM 33 N ND HEC . . . D 2 -18.023 3.741 28.595 1 33.51 ? ND HEC 201 B 1 
HETATM 34 C C1D HEC . . . D 2 -17.693 3.035 27.458 1 34.05 ? C1D HEC 201 B 1 
HETATM 35 C C2D HEC . . . D 2 -17.906 1.622 27.711 1 35.46 ? C2D HEC 201 B 1 
HETATM 36 C C3D HEC . . . D 2 -18.367 1.489 28.96 1 35.23 ? C3D HEC 201 B 1 
HETATM 37 C C4D HEC . . . D 2 -18.438 2.81 29.545 1 36.14 ? C4D HEC 201 B 1 
HETATM 38 C CMD HEC . . . D 2 -17.666 0.484 26.687 1 39.94 ? CMD HEC 201 B 1 
HETATM 39 C CAD HEC . . . D 2 -18.744 0.178 29.69 1 41.53 ? CAD HEC 201 B 1 
HETATM 40 C CBD HEC . . . D 2 -17.497 -0.34 30.411 1 41.03 ? CBD HEC 201 B 1 
HETATM 41 C CGD HEC . . . D 2 -17.759 -1.625 31.165 1 43.26 ? CGD HEC 201 B 1 
HETATM 42 O O1D HEC . . . D 2 -16.96 -2.573 31.03 1 46.54 ? O1D HEC 201 B 1 
HETATM 43 O O2D HEC . . . D 2 -18.763 -1.724 31.898 1 43.12 -1 O2D HEC 201 B 1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           324 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           43 
#