data_6A4I # _model_server_result.job_id 4I1YVCJMtG4M6_zNxcUFdQ _model_server_result.datetime_utc '2024-11-30 06:52:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6a4i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":403}' # _entry.id 6A4I # _exptl.entry_id 6A4I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.225 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6A4I _cell.length_a 156.308 _cell.length_b 144.106 _cell.length_c 89.002 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6A4I _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 K N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 331 A HIS 328 1_555 E FE HEM . A HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.897 ? metalc ? metalc2 E FE HEM . A HEM 401 1_555 F NAH 9R9 . A 9R9 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc3 B NE2 HIS 331 B HIS 328 1_555 I FE HEM . B HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? metalc ? metalc4 I FE HEM . B HEM 401 1_555 J NAH 9R9 . B 9R9 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc5 C NE2 HIS 331 C HIS 328 1_555 L FE HEM . C HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? metalc ? metalc6 L FE HEM . C HEM 401 1_555 M NAH 9R9 . C 9R9 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc7 D NE2 HIS 331 D HIS 328 1_555 N FE HEM . D HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc8 N FE HEM . D HEM 401 1_555 O NAH 9R9 . D 9R9 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 440 n n N H TRP sing 441 n n N H2 TRP sing 442 n n CA C TRP sing 443 n n CA CB TRP sing 444 n n CA HA TRP sing 445 n n C O TRP doub 446 n n C OXT TRP sing 447 n n CB CG TRP sing 448 n n CB HB2 TRP sing 449 n n CB HB3 TRP sing 450 n n CG CD1 TRP doub 451 n y CG CD2 TRP sing 452 n y CD1 NE1 TRP sing 453 n y CD1 HD1 TRP sing 454 n n CD2 CE2 TRP doub 455 n y CD2 CE3 TRP sing 456 n y NE1 CE2 TRP sing 457 n y NE1 HE1 TRP sing 458 n n CE2 CZ2 TRP sing 459 n y CE3 CZ3 TRP doub 460 n y CE3 HE3 TRP sing 461 n n CZ2 CH2 TRP doub 462 n y CZ2 HZ2 TRP sing 463 n n CZ3 CH2 TRP sing 464 n y CZ3 HZ3 TRP sing 465 n n CH2 HH2 TRP sing 466 n n OXT HXT TRP sing 467 n n # _atom_sites.entry_id 6A4I _atom_sites.fract_transf_matrix[1][1] 0.006398 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006939 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011236 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HEM A 1 401 401 HEM HEM . F 3 9R9 A 1 402 1 9R9 DRG . G 4 TRP A 1 403 5 TRP LTP . H 5 CIT A 1 404 8 CIT CIT . I 2 HEM B 1 401 401 HEM HEM . J 3 9R9 B 1 402 2 9R9 DRG . K 4 TRP B 1 403 6 TRP LTP . L 2 HEM C 1 401 401 HEM HEM . M 3 9R9 C 1 402 3 9R9 DRG . N 2 HEM D 1 401 401 HEM HEM . O 3 9R9 D 1 402 4 9R9 DRG . P 4 TRP D 1 403 7 TRP LTP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . P 4 21.681 128.806 43.283 1 109.84 ? N TRP 403 D 1 HETATM 2 C CA TRP . . . P 4 21.272 128.008 44.447 1 100.98 ? CA TRP 403 D 1 HETATM 3 C C TRP . . . P 4 22.466 127.271 45.088 1 109.5 ? C TRP 403 D 1 HETATM 4 O O TRP . . . P 4 23.542 127.244 44.446 1 117.34 ? O TRP 403 D 1 HETATM 5 C CB TRP . . . P 4 20.189 127.017 44.037 1 92.36 ? CB TRP 403 D 1 HETATM 6 C CG TRP . . . P 4 20.651 125.912 43.063 1 94.91 ? CG TRP 403 D 1 HETATM 7 C CD1 TRP . . . P 4 21.682 125.073 43.222 1 93.04 ? CD1 TRP 403 D 1 HETATM 8 C CD2 TRP . . . P 4 20.027 125.621 41.926 1 90.96 ? CD2 TRP 403 D 1 HETATM 9 N NE1 TRP . . . P 4 21.715 124.262 42.162 1 87.59 ? NE1 TRP 403 D 1 HETATM 10 C CE2 TRP . . . P 4 20.7 124.592 41.367 1 88.67 ? CE2 TRP 403 D 1 HETATM 11 C CE3 TRP . . . P 4 18.957 126.168 41.326 1 87.19 ? CE3 TRP 403 D 1 HETATM 12 C CZ2 TRP . . . P 4 20.32 124.071 40.2 1 88.79 ? CZ2 TRP 403 D 1 HETATM 13 C CZ3 TRP . . . P 4 18.517 125.651 40.105 1 86.45 ? CZ3 TRP 403 D 1 HETATM 14 C CH2 TRP . . . P 4 19.212 124.586 39.532 1 83.91 ? CH2 TRP 403 D 1 HETATM 15 O OXT TRP . . . P 4 22.272 126.729 46.2 1 107.73 ? OXT TRP 403 D 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 15 #