data_6A5M # _model_server_result.job_id H2TPQ90c0iC8B6KhJJxHgA _model_server_result.datetime_utc '2024-11-04 22:34:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6a5m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":803}' # _entry.id 6A5M # _exptl.entry_id 6A5M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.63 _cell.angle_gamma 90 _cell.entry_id 6A5M _cell.length_a 57.546 _cell.length_b 77.098 _cell.length_c 66.82 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6A5M _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 81 A ARG 344 1_555 A N MSE 82 A MSE 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C MSE 82 A MSE 345 1_555 A N GLU 83 A GLU 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C TYR 99 A TYR 362 1_555 A N MSE 100 A MSE 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C MSE 100 A MSE 363 1_555 A N LYS 101 A LYS 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 A C GLY 209 A GLY 472 1_555 A N MSE 210 A MSE 473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C MSE 210 A MSE 473 1_555 A N ASN 211 A ASN 474 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 A C GLY 416 A GLY 679 1_555 A N MSE 417 A MSE 680 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale8 A C MSE 417 A MSE 680 1_555 A N SER 418 A SER 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale9 A C LEU 420 A LEU 683 1_555 A N MSE 421 A MSE 684 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale10 A C VAL 478 A VAL 741 1_555 A N MSE 479 A MSE 742 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale11 A C MSE 479 A MSE 742 1_555 A N PHE 480 A PHE 743 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 A SG CYS 290 A CYS 553 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? metalc ? metalc2 A SG CYS 290 A CYS 553 1_555 D ZN ZN . A ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc3 A SG CYS 292 A CYS 555 1_555 D ZN ZN . A ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc4 A SG CYS 296 A CYS 559 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc5 A SG CYS 296 A CYS 559 1_555 D ZN ZN . A ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc6 A SG CYS 304 A CYS 567 1_555 D ZN ZN . A ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc7 A SG CYS 306 A CYS 569 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc8 A SG CYS 332 A CYS 595 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc9 A SG CYS 332 A CYS 595 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc10 A SG CYS 336 A CYS 599 1_555 B ZN ZN . A ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc11 A SG CYS 338 A CYS 601 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc12 A SG CYS 342 A CYS 605 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc13 A SG CYS 457 A CYS 720 1_555 E ZN ZN . A ZN 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc14 A SG CYS 515 A CYS 778 1_555 E ZN ZN . A ZN 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc15 A SG CYS 517 A CYS 780 1_555 E ZN ZN . A ZN 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc16 A SG CYS 522 A CYS 785 1_555 E ZN ZN . A ZN 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6A5M _atom_sites.fract_transf_matrix[1][1] 0.017377 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006541 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012971 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015991 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 801 802 ZN ZN . C 2 ZN A 1 802 803 ZN ZN . D 2 ZN A 1 803 804 ZN ZN . E 2 ZN A 1 804 805 ZN ZN . F 3 SAM A 1 805 806 SAM SAM . G 4 HOH A 1 901 1 HOH HOH . G 4 HOH A 2 902 91 HOH HOH . G 4 HOH A 3 903 52 HOH HOH . G 4 HOH A 4 904 32 HOH HOH . G 4 HOH A 5 905 184 HOH HOH . G 4 HOH A 6 906 122 HOH HOH . G 4 HOH A 7 907 79 HOH HOH . G 4 HOH A 8 908 6 HOH HOH . G 4 HOH A 9 909 180 HOH HOH . G 4 HOH A 10 910 13 HOH HOH . G 4 HOH A 11 911 27 HOH HOH . G 4 HOH A 12 912 100 HOH HOH . G 4 HOH A 13 913 110 HOH HOH . G 4 HOH A 14 914 35 HOH HOH . G 4 HOH A 15 915 148 HOH HOH . G 4 HOH A 16 916 26 HOH HOH . G 4 HOH A 17 917 53 HOH HOH . G 4 HOH A 18 918 72 HOH HOH . G 4 HOH A 19 919 93 HOH HOH . G 4 HOH A 20 920 96 HOH HOH . G 4 HOH A 21 921 165 HOH HOH . G 4 HOH A 22 922 2 HOH HOH . G 4 HOH A 23 923 4 HOH HOH . G 4 HOH A 24 924 15 HOH HOH . G 4 HOH A 25 925 121 HOH HOH . G 4 HOH A 26 926 63 HOH HOH . G 4 HOH A 27 927 87 HOH HOH . G 4 HOH A 28 928 182 HOH HOH . G 4 HOH A 29 929 71 HOH HOH . G 4 HOH A 30 930 160 HOH HOH . G 4 HOH A 31 931 16 HOH HOH . G 4 HOH A 32 932 42 HOH HOH . G 4 HOH A 33 933 128 HOH HOH . G 4 HOH A 34 934 3 HOH HOH . G 4 HOH A 35 935 78 HOH HOH . G 4 HOH A 36 936 5 HOH HOH . G 4 HOH A 37 937 9 HOH HOH . G 4 HOH A 38 938 164 HOH HOH . G 4 HOH A 39 939 38 HOH HOH . G 4 HOH A 40 940 159 HOH HOH . G 4 HOH A 41 941 8 HOH HOH . G 4 HOH A 42 942 84 HOH HOH . G 4 HOH A 43 943 43 HOH HOH . G 4 HOH A 44 944 18 HOH HOH . G 4 HOH A 45 945 67 HOH HOH . G 4 HOH A 46 946 64 HOH HOH . G 4 HOH A 47 947 149 HOH HOH . G 4 HOH A 48 948 33 HOH HOH . G 4 HOH A 49 949 136 HOH HOH . G 4 HOH A 50 950 101 HOH HOH . G 4 HOH A 51 951 97 HOH HOH . G 4 HOH A 52 952 56 HOH HOH . G 4 HOH A 53 953 68 HOH HOH . G 4 HOH A 54 954 44 HOH HOH . G 4 HOH A 55 955 88 HOH HOH . G 4 HOH A 56 956 47 HOH HOH . G 4 HOH A 57 957 37 HOH HOH . G 4 HOH A 58 958 58 HOH HOH . G 4 HOH A 59 959 86 HOH HOH . G 4 HOH A 60 960 36 HOH HOH . G 4 HOH A 61 961 46 HOH HOH . G 4 HOH A 62 962 141 HOH HOH . G 4 HOH A 63 963 62 HOH HOH . G 4 HOH A 64 964 81 HOH HOH . G 4 HOH A 65 965 55 HOH HOH . G 4 HOH A 66 966 107 HOH HOH . G 4 HOH A 67 967 162 HOH HOH . G 4 HOH A 68 968 59 HOH HOH . G 4 HOH A 69 969 34 HOH HOH . G 4 HOH A 70 970 89 HOH HOH . G 4 HOH A 71 971 173 HOH HOH . G 4 HOH A 72 972 103 HOH HOH . G 4 HOH A 73 973 117 HOH HOH . G 4 HOH A 74 974 31 HOH HOH . G 4 HOH A 75 975 65 HOH HOH . G 4 HOH A 76 976 50 HOH HOH . G 4 HOH A 77 977 142 HOH HOH . G 4 HOH A 78 978 20 HOH HOH . G 4 HOH A 79 979 75 HOH HOH . G 4 HOH A 80 980 109 HOH HOH . G 4 HOH A 81 981 114 HOH HOH . G 4 HOH A 82 982 92 HOH HOH . G 4 HOH A 83 983 175 HOH HOH . G 4 HOH A 84 984 61 HOH HOH . G 4 HOH A 85 985 188 HOH HOH . G 4 HOH A 86 986 126 HOH HOH . G 4 HOH A 87 987 10 HOH HOH . G 4 HOH A 88 988 19 HOH HOH . G 4 HOH A 89 989 11 HOH HOH . G 4 HOH A 90 990 189 HOH HOH . G 4 HOH A 91 991 69 HOH HOH . G 4 HOH A 92 992 143 HOH HOH . G 4 HOH A 93 993 168 HOH HOH . G 4 HOH A 94 994 25 HOH HOH . G 4 HOH A 95 995 77 HOH HOH . G 4 HOH A 96 996 146 HOH HOH . G 4 HOH A 97 997 17 HOH HOH . G 4 HOH A 98 998 51 HOH HOH . G 4 HOH A 99 999 130 HOH HOH . G 4 HOH A 100 1000 29 HOH HOH . G 4 HOH A 101 1001 116 HOH HOH . G 4 HOH A 102 1002 76 HOH HOH . G 4 HOH A 103 1003 40 HOH HOH . G 4 HOH A 104 1004 66 HOH HOH . G 4 HOH A 105 1005 54 HOH HOH . G 4 HOH A 106 1006 135 HOH HOH . G 4 HOH A 107 1007 115 HOH HOH . G 4 HOH A 108 1008 28 HOH HOH . G 4 HOH A 109 1009 151 HOH HOH . G 4 HOH A 110 1010 158 HOH HOH . G 4 HOH A 111 1011 98 HOH HOH . G 4 HOH A 112 1012 190 HOH HOH . G 4 HOH A 113 1013 41 HOH HOH . G 4 HOH A 114 1014 49 HOH HOH . G 4 HOH A 115 1015 80 HOH HOH . G 4 HOH A 116 1016 187 HOH HOH . G 4 HOH A 117 1017 24 HOH HOH . G 4 HOH A 118 1018 139 HOH HOH . G 4 HOH A 119 1019 161 HOH HOH . G 4 HOH A 120 1020 45 HOH HOH . G 4 HOH A 121 1021 138 HOH HOH . G 4 HOH A 122 1022 83 HOH HOH . G 4 HOH A 123 1023 129 HOH HOH . G 4 HOH A 124 1024 113 HOH HOH . G 4 HOH A 125 1025 104 HOH HOH . G 4 HOH A 126 1026 7 HOH HOH . G 4 HOH A 127 1027 74 HOH HOH . G 4 HOH A 128 1028 147 HOH HOH . G 4 HOH A 129 1029 171 HOH HOH . G 4 HOH A 130 1030 152 HOH HOH . G 4 HOH A 131 1031 134 HOH HOH . G 4 HOH A 132 1032 12 HOH HOH . G 4 HOH A 133 1033 106 HOH HOH . G 4 HOH A 134 1034 125 HOH HOH . G 4 HOH A 135 1035 48 HOH HOH . G 4 HOH A 136 1036 82 HOH HOH . G 4 HOH A 137 1037 95 HOH HOH . G 4 HOH A 138 1038 70 HOH HOH . G 4 HOH A 139 1039 181 HOH HOH . G 4 HOH A 140 1040 85 HOH HOH . G 4 HOH A 141 1041 14 HOH HOH . G 4 HOH A 142 1042 140 HOH HOH . G 4 HOH A 143 1043 193 HOH HOH . G 4 HOH A 144 1044 73 HOH HOH . G 4 HOH A 145 1045 99 HOH HOH . G 4 HOH A 146 1046 23 HOH HOH . G 4 HOH A 147 1047 39 HOH HOH . G 4 HOH A 148 1048 94 HOH HOH . G 4 HOH A 149 1049 120 HOH HOH . G 4 HOH A 150 1050 22 HOH HOH . G 4 HOH A 151 1051 102 HOH HOH . G 4 HOH A 152 1052 119 HOH HOH . G 4 HOH A 153 1053 132 HOH HOH . G 4 HOH A 154 1054 118 HOH HOH . G 4 HOH A 155 1055 133 HOH HOH . G 4 HOH A 156 1056 127 HOH HOH . G 4 HOH A 157 1057 153 HOH HOH . G 4 HOH A 158 1058 144 HOH HOH . G 4 HOH A 159 1059 137 HOH HOH . G 4 HOH A 160 1060 21 HOH HOH . G 4 HOH A 161 1061 57 HOH HOH . G 4 HOH A 162 1062 183 HOH HOH . G 4 HOH A 163 1063 108 HOH HOH . G 4 HOH A 164 1064 155 HOH HOH . G 4 HOH A 165 1065 191 HOH HOH . G 4 HOH A 166 1066 169 HOH HOH . G 4 HOH A 167 1067 170 HOH HOH . G 4 HOH A 168 1068 157 HOH HOH . G 4 HOH A 169 1069 112 HOH HOH . G 4 HOH A 170 1070 156 HOH HOH . G 4 HOH A 171 1071 166 HOH HOH . G 4 HOH A 172 1072 124 HOH HOH . G 4 HOH A 173 1073 105 HOH HOH . G 4 HOH A 174 1074 186 HOH HOH . G 4 HOH A 175 1075 178 HOH HOH . G 4 HOH A 176 1076 163 HOH HOH . G 4 HOH A 177 1077 145 HOH HOH . G 4 HOH A 178 1078 154 HOH HOH . G 4 HOH A 179 1079 150 HOH HOH . G 4 HOH A 180 1080 177 HOH HOH . G 4 HOH A 181 1081 123 HOH HOH . G 4 HOH A 182 1082 60 HOH HOH . G 4 HOH A 183 1083 30 HOH HOH . G 4 HOH A 184 1084 174 HOH HOH . G 4 HOH A 185 1085 111 HOH HOH . G 4 HOH A 186 1086 90 HOH HOH . G 4 HOH A 187 1087 185 HOH HOH . G 4 HOH A 188 1088 131 HOH HOH . G 4 HOH A 189 1089 167 HOH HOH . G 4 HOH A 190 1090 179 HOH HOH . G 4 HOH A 191 1091 172 HOH HOH . G 4 HOH A 192 1092 192 HOH HOH . G 4 HOH A 193 1093 176 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -14.697 _atom_site.Cartn_y -19.68 _atom_site.Cartn_z -22.947 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.78 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 803 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #