data_6A5Y
#
_model_server_result.job_id            RYX0KYZMIdgb-lKqUfVILQ 
_model_server_result.datetime_utc      '2024-11-27 02:12:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6a5y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":501}' 
#
_entry.id    6A5Y 
#
_exptl.entry_id    6A5Y 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              300.435 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(9cis)-retinoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6A5Y 
_cell.length_a            83.38 
_cell.length_b            83.38 
_cell.length_c            161.63 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6A5Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C20 H28 O2' 
_chem_comp.formula_weight    300.435 
_chem_comp.id                9CR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(9cis)-retinoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C15 9CR doub 1 n n 
C15 C14 9CR sing 2 n n 
C15 O2 9CR sing 3 n n 
C14 C13 9CR doub 4 e n 
C13 C12 9CR sing 5 n n 
C13 C20 9CR sing 6 n n 
C12 C11 9CR doub 7 e n 
C11 C10 9CR sing 8 n n 
C18 C5 9CR sing 9 n n 
C10 C9 9CR doub 10 z n 
C9 C19 9CR sing 11 n n 
C9 C8 9CR sing 12 n n 
C8 C7 9CR doub 13 e n 
C5 C4 9CR sing 14 n n 
C5 C6 9CR doub 15 n n 
C4 C3 9CR sing 16 n n 
C7 C6 9CR sing 17 n n 
C6 C1 9CR sing 18 n n 
C3 C2 9CR sing 19 n n 
C1 C17 9CR sing 20 n n 
C1 C2 9CR sing 21 n n 
C1 C16 9CR sing 22 n n 
C2 H1 9CR sing 23 n n 
C2 H2 9CR sing 24 n n 
C3 H3 9CR sing 25 n n 
C3 H4 9CR sing 26 n n 
C4 H5 9CR sing 27 n n 
C4 H6 9CR sing 28 n n 
C7 H7 9CR sing 29 n n 
C8 H8 9CR sing 30 n n 
C10 H9 9CR sing 31 n n 
C11 H10 9CR sing 32 n n 
C12 H11 9CR sing 33 n n 
C14 H12 9CR sing 34 n n 
C16 H13 9CR sing 35 n n 
C16 H14 9CR sing 36 n n 
C16 H15 9CR sing 37 n n 
C17 H16 9CR sing 38 n n 
C17 H17 9CR sing 39 n n 
C17 H18 9CR sing 40 n n 
C18 H19 9CR sing 41 n n 
C18 H20 9CR sing 42 n n 
C18 H21 9CR sing 43 n n 
C19 H22 9CR sing 44 n n 
C19 H23 9CR sing 45 n n 
C19 H24 9CR sing 46 n n 
C20 H25 9CR sing 47 n n 
C20 H26 9CR sing 48 n n 
C20 H27 9CR sing 49 n n 
O2 H28 9CR sing 50 n n 
#
_atom_sites.entry_id                     6A5Y 
_atom_sites.fract_transf_matrix[1][1]    0.011993 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011993 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006187 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 4 9R0 A 1 501 502 9R0 glx . 
F 5 SO4 A 1 502 1 SO4 SO4 . 
G 6 9CR D 1 501 501 9CR 9CR . 
H 7 PO4 D 1 502 1 PO4 PO4 . 
I 5 SO4 D 1 503 2 SO4 SO4 . 
J 8 HOH A 1 601 35 HOH HOH . 
J 8 HOH A 2 602 71 HOH HOH . 
J 8 HOH A 3 603 51 HOH HOH . 
J 8 HOH A 4 604 52 HOH HOH . 
J 8 HOH A 5 605 66 HOH HOH . 
J 8 HOH A 6 606 44 HOH HOH . 
J 8 HOH A 7 607 24 HOH HOH . 
J 8 HOH A 8 608 21 HOH HOH . 
J 8 HOH A 9 609 34 HOH HOH . 
J 8 HOH A 10 610 31 HOH HOH . 
J 8 HOH A 11 611 74 HOH HOH . 
J 8 HOH A 12 612 73 HOH HOH . 
J 8 HOH A 13 613 65 HOH HOH . 
J 8 HOH A 14 614 23 HOH HOH . 
J 8 HOH A 15 615 38 HOH HOH . 
J 8 HOH A 16 616 28 HOH HOH . 
J 8 HOH A 17 617 3 HOH HOH . 
J 8 HOH A 18 618 70 HOH HOH . 
J 8 HOH A 19 619 13 HOH HOH . 
J 8 HOH A 20 620 25 HOH HOH . 
J 8 HOH A 21 621 26 HOH HOH . 
J 8 HOH A 22 622 8 HOH HOH . 
J 8 HOH A 23 623 76 HOH HOH . 
J 8 HOH A 24 624 47 HOH HOH . 
J 8 HOH A 25 625 27 HOH HOH . 
J 8 HOH A 26 626 46 HOH HOH . 
J 8 HOH A 27 627 48 HOH HOH . 
J 8 HOH A 28 628 41 HOH HOH . 
J 8 HOH A 29 629 75 HOH HOH . 
J 8 HOH A 30 630 67 HOH HOH . 
J 8 HOH A 31 631 58 HOH HOH . 
J 8 HOH A 32 632 56 HOH HOH . 
J 8 HOH A 33 633 33 HOH HOH . 
J 8 HOH A 34 634 30 HOH HOH . 
J 8 HOH A 35 635 14 HOH HOH . 
J 8 HOH A 36 636 68 HOH HOH . 
J 8 HOH A 37 637 1 HOH HOH . 
J 8 HOH A 38 638 40 HOH HOH . 
J 8 HOH A 39 639 10 HOH HOH . 
J 8 HOH A 40 640 84 HOH HOH . 
J 8 HOH A 41 641 42 HOH HOH . 
J 8 HOH A 42 642 29 HOH HOH . 
J 8 HOH A 43 643 72 HOH HOH . 
J 8 HOH A 44 644 37 HOH HOH . 
J 8 HOH A 45 645 69 HOH HOH . 
K 8 HOH D 1 601 43 HOH HOH . 
K 8 HOH D 2 602 39 HOH HOH . 
K 8 HOH D 3 603 5 HOH HOH . 
K 8 HOH D 4 604 78 HOH HOH . 
K 8 HOH D 5 605 62 HOH HOH . 
K 8 HOH D 6 606 54 HOH HOH . 
K 8 HOH D 7 607 55 HOH HOH . 
K 8 HOH D 8 608 12 HOH HOH . 
K 8 HOH D 9 609 81 HOH HOH . 
K 8 HOH D 10 610 4 HOH HOH . 
K 8 HOH D 11 611 57 HOH HOH . 
K 8 HOH D 12 612 7 HOH HOH . 
K 8 HOH D 13 613 17 HOH HOH . 
K 8 HOH D 14 614 2 HOH HOH . 
K 8 HOH D 15 615 18 HOH HOH . 
K 8 HOH D 16 616 19 HOH HOH . 
K 8 HOH D 17 617 22 HOH HOH . 
K 8 HOH D 18 618 9 HOH HOH . 
K 8 HOH D 19 619 16 HOH HOH . 
K 8 HOH D 20 620 53 HOH HOH . 
K 8 HOH D 21 621 45 HOH HOH . 
K 8 HOH D 22 622 15 HOH HOH . 
K 8 HOH D 23 623 50 HOH HOH . 
K 8 HOH D 24 624 6 HOH HOH . 
K 8 HOH D 25 625 20 HOH HOH . 
K 8 HOH D 26 626 61 HOH HOH . 
K 8 HOH D 27 627 36 HOH HOH . 
K 8 HOH D 28 628 82 HOH HOH . 
K 8 HOH D 29 629 77 HOH HOH . 
K 8 HOH D 30 630 64 HOH HOH . 
K 8 HOH D 31 631 63 HOH HOH . 
K 8 HOH D 32 632 80 HOH HOH . 
K 8 HOH D 33 633 83 HOH HOH . 
K 8 HOH D 34 634 11 HOH HOH . 
K 8 HOH D 35 635 79 HOH HOH . 
L 8 HOH F 1 701 60 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 9CR . . . G 6 -15.174 24.233 27.304 1 46.17 ? C1 9CR 501 D 1 
HETATM 2 C C2 9CR . . . G 6 -15.25 25.586 28.025 1 52.68 ? C2 9CR 501 D 1 
HETATM 3 C C3 9CR . . . G 6 -16.649 26.17 28.11 1 52.69 ? C3 9CR 501 D 1 
HETATM 4 C C4 9CR . . . G 6 -17.203 26.358 26.705 1 52.58 ? C4 9CR 501 D 1 
HETATM 5 C C5 9CR . . . G 6 -17.318 25.016 25.982 1 46.48 ? C5 9CR 501 D 1 
HETATM 6 C C6 9CR . . . G 6 -15.965 24.277 25.934 1 44.8 ? C6 9CR 501 D 1 
HETATM 7 C C7 9CR . . . G 6 -15.944 22.892 25.235 1 42.64 ? C7 9CR 501 D 1 
HETATM 8 C C8 9CR . . . G 6 -17.193 22.077 25.12 1 38.95 ? C8 9CR 501 D 1 
HETATM 9 C C9 9CR . . . G 6 -17.26 20.935 24.313 1 32.86 ? C9 9CR 501 D 1 
HETATM 10 C C10 9CR . . . G 6 -18.483 20.266 24.133 1 32.39 ? C10 9CR 501 D 1 
HETATM 11 C C11 9CR . . . G 6 -19.672 20.484 24.81 1 30.3 ? C11 9CR 501 D 1 
HETATM 12 C C12 9CR . . . G 6 -20.865 19.741 24.738 1 32.05 ? C12 9CR 501 D 1 
HETATM 13 C C13 9CR . . . G 6 -22.071 20.025 25.197 1 33.54 ? C13 9CR 501 D 1 
HETATM 14 C C14 9CR . . . G 6 -23.19 19.195 24.632 1 34.91 ? C14 9CR 501 D 1 
HETATM 15 C C15 9CR . . . G 6 -24.674 19.489 24.823 1 35.09 ? C15 9CR 501 D 1 
HETATM 16 C C16 9CR . . . G 6 -15.687 23.128 28.242 1 50.04 ? C16 9CR 501 D 1 
HETATM 17 C C17 9CR . . . G 6 -13.694 23.973 26.969 1 43.91 ? C17 9CR 501 D 1 
HETATM 18 C C18 9CR . . . G 6 -17.933 25.238 24.619 1 49.34 ? C18 9CR 501 D 1 
HETATM 19 C C19 9CR . . . G 6 -16.056 20.359 23.712 1 34.56 ? C19 9CR 501 D 1 
HETATM 20 C C20 9CR . . . G 6 -22.392 21.061 26.234 1 41.91 ? C20 9CR 501 D 1 
HETATM 21 O O1 9CR . . . G 6 -25.446 19.166 23.896 1 37.72 ? O1 9CR 501 D 1 
HETATM 22 O O2 9CR . . . G 6 -25.072 19.925 25.909 1 35.2 ? O2 9CR 501 D 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           22 
#