data_6A60 # _model_server_result.job_id vrQd-Nyuw2vuejgUpNAiXw _model_server_result.datetime_utc '2024-11-23 10:40:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6a60 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":501}' # _entry.id 6A60 # _exptl.entry_id 6A60 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 300.435 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(9cis)-retinoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6A60 _cell.length_a 102.849 _cell.length_b 102.849 _cell.length_c 109.456 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6A60 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H28 O2' _chem_comp.formula_weight 300.435 _chem_comp.id 9CR _chem_comp.mon_nstd_flag . _chem_comp.name '(9cis)-retinoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C15 9CR doub 62 n n C15 C14 9CR sing 63 n n C15 O2 9CR sing 64 n n C14 C13 9CR doub 65 e n C13 C12 9CR sing 66 n n C13 C20 9CR sing 67 n n C12 C11 9CR doub 68 e n C11 C10 9CR sing 69 n n C18 C5 9CR sing 70 n n C10 C9 9CR doub 71 z n C9 C19 9CR sing 72 n n C9 C8 9CR sing 73 n n C8 C7 9CR doub 74 e n C5 C4 9CR sing 75 n n C5 C6 9CR doub 76 n n C4 C3 9CR sing 77 n n C7 C6 9CR sing 78 n n C6 C1 9CR sing 79 n n C3 C2 9CR sing 80 n n C1 C17 9CR sing 81 n n C1 C2 9CR sing 82 n n C1 C16 9CR sing 83 n n C2 H1 9CR sing 84 n n C2 H2 9CR sing 85 n n C3 H3 9CR sing 86 n n C3 H4 9CR sing 87 n n C4 H5 9CR sing 88 n n C4 H6 9CR sing 89 n n C7 H7 9CR sing 90 n n C8 H8 9CR sing 91 n n C10 H9 9CR sing 92 n n C11 H10 9CR sing 93 n n C12 H11 9CR sing 94 n n C14 H12 9CR sing 95 n n C16 H13 9CR sing 96 n n C16 H14 9CR sing 97 n n C16 H15 9CR sing 98 n n C17 H16 9CR sing 99 n n C17 H17 9CR sing 100 n n C17 H18 9CR sing 101 n n C18 H19 9CR sing 102 n n C18 H20 9CR sing 103 n n C18 H21 9CR sing 104 n n C19 H22 9CR sing 105 n n C19 H23 9CR sing 106 n n C19 H24 9CR sing 107 n n C20 H25 9CR sing 108 n n C20 H26 9CR sing 109 n n C20 H27 9CR sing 110 n n O2 H28 9CR sing 111 n n # _atom_sites.entry_id 6A60 _atom_sites.fract_transf_matrix[1][1] 0.009723 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009723 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009136 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 4 064 A 1 501 1 064 064 . F 5 9CR D 1 501 1 9CR 9CR . G 6 HOH A 1 601 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 9CR . . . F 5 10.671 -42.475 2.726 1 81.54 ? C1 9CR 501 D 1 HETATM 2 C C2 9CR . . . F 5 11.123 -42.976 4.104 1 90.91 ? C2 9CR 501 D 1 HETATM 3 C C3 9CR . . . F 5 10.549 -42.21 5.254 1 90.61 ? C3 9CR 501 D 1 HETATM 4 C C4 9CR . . . F 5 10.864 -40.728 5.134 1 85.23 ? C4 9CR 501 D 1 HETATM 5 C C5 9CR . . . F 5 10.658 -40.181 3.748 1 88.11 ? C5 9CR 501 D 1 HETATM 6 C C6 9CR . . . F 5 10.66 -40.957 2.644 1 83.1 ? C6 9CR 501 D 1 HETATM 7 C C7 9CR . . . F 5 10.619 -40.328 1.352 1 90.69 ? C7 9CR 501 D 1 HETATM 8 C C8 9CR . . . F 5 9.561 -40.279 0.493 1 94.74 ? C8 9CR 501 D 1 HETATM 9 C C9 9CR . . . F 5 9.218 -39.167 -0.279 1 83.93 ? C9 9CR 501 D 1 HETATM 10 C C10 9CR . . . F 5 7.949 -38.534 -0.206 1 78.71 ? C10 9CR 501 D 1 HETATM 11 C C11 9CR . . . F 5 7.554 -37.257 -0.586 1 87 ? C11 9CR 501 D 1 HETATM 12 C C12 9CR . . . F 5 6.341 -36.538 -0.431 1 91.66 ? C12 9CR 501 D 1 HETATM 13 C C13 9CR . . . F 5 5.343 -36.637 0.558 1 83.96 ? C13 9CR 501 D 1 HETATM 14 C C14 9CR . . . F 5 4.203 -35.836 0.717 1 83.48 ? C14 9CR 501 D 1 HETATM 15 C C15 9CR . . . F 5 3.97 -34.38 0.417 1 91.01 ? C15 9CR 501 D 1 HETATM 16 C C16 9CR . . . F 5 11.661 -43.038 1.699 1 84.66 ? C16 9CR 501 D 1 HETATM 17 C C17 9CR . . . F 5 9.285 -43.059 2.417 1 78.53 ? C17 9CR 501 D 1 HETATM 18 C C18 9CR . . . F 5 10.47 -38.688 3.717 1 87.31 ? C18 9CR 501 D 1 HETATM 19 C C19 9CR . . . F 5 10.258 -38.596 -1.154 1 85.12 ? C19 9CR 501 D 1 HETATM 20 C C20 9CR . . . F 5 5.534 -37.681 1.572 1 86.2 ? C20 9CR 501 D 1 HETATM 21 O O1 9CR . . . F 5 4.816 -33.715 -0.252 1 89.57 ? O1 9CR 501 D 1 HETATM 22 O O2 9CR . . . F 5 2.931 -33.905 0.883 1 72.84 ? O2 9CR 501 D 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 41 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 389 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 22 #