data_6A6A # _model_server_result.job_id SzwEkSXnumAq1gpoNNxoyg _model_server_result.datetime_utc '2024-11-25 22:36:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6a6a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":301}' # _entry.id 6A6A # _exptl.entry_id 6A6A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 89.093 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description D-ALANINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.08 _cell.angle_gamma 90 _cell.entry_id 6A6A _cell.length_a 85.368 _cell.length_b 40.83 _cell.length_c 114.672 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6A6A _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 137 A HIS 188 1_555 G ZN ZN . A ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc2 A OD1 ASP 144 A ASP 195 1_555 G ZN ZN . A ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc3 A OD2 ASP 144 A ASP 195 1_555 G ZN ZN . A ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? metalc ? metalc4 A ND1 HIS 190 A HIS 241 1_555 G ZN ZN . A ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? metalc ? metalc5 F O ACT . A ACT 304 1_555 G ZN ZN . A ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc6 F OXT ACT . A ACT 304 1_555 G ZN ZN . A ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc7 B NE2 HIS 137 B HIS 188 1_555 N ZN ZN . B ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc8 B OD1 ASP 144 B ASP 195 1_555 N ZN ZN . B ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc9 B ND1 HIS 190 B HIS 241 1_555 N ZN ZN . B ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.907 ? metalc ? metalc10 M O ACT . B ACT 304 1_555 N ZN ZN . B ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc11 M OXT ACT . B ACT 304 1_555 N ZN ZN . B ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? # _chem_comp.formula 'C3 H7 N O2' _chem_comp.formula_weight 89.093 _chem_comp.id DAL _chem_comp.mon_nstd_flag . _chem_comp.name D-ALANINE _chem_comp.type 'd-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA DAL sing 89 n n N H DAL sing 90 n n N H2 DAL sing 91 n n CA CB DAL sing 92 n n CA C DAL sing 93 n n CA HA DAL sing 94 n n CB HB1 DAL sing 95 n n CB HB2 DAL sing 96 n n CB HB3 DAL sing 97 n n C O DAL doub 98 n n C OXT DAL sing 99 n n OXT HXT DAL sing 100 n n # _atom_sites.entry_id 6A6A _atom_sites.fract_transf_matrix[1][1] 0.011714 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004052 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024492 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009227 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DAL A 1 301 1 DAL DAL . D 3 GOL A 1 302 1 GOL GOL . E 3 GOL A 1 303 4 GOL GOL . F 4 ACT A 1 304 1 ACT ACT . G 5 ZN A 1 305 1 ZN ZN . H 6 PGE A 1 306 2 PGE PGE . I 6 PGE A 1 307 3 PGE PGE . J 2 DAL B 1 301 1 DAL DAL . K 3 GOL B 1 302 2 GOL GOL . L 3 GOL B 1 303 3 GOL GOL . M 4 ACT B 1 304 2 ACT ACT . N 5 ZN B 1 305 2 ZN ZN . O 6 PGE B 1 306 1 PGE PGE . P 6 PGE B 1 307 4 PGE PGE . Q 7 HOH A 1 401 1 HOH HOH . Q 7 HOH A 2 402 17 HOH HOH . Q 7 HOH A 3 403 5 HOH HOH . Q 7 HOH A 4 404 21 HOH HOH . Q 7 HOH A 5 405 2 HOH HOH . Q 7 HOH A 6 406 19 HOH HOH . Q 7 HOH A 7 407 3 HOH HOH . Q 7 HOH A 8 408 6 HOH HOH . Q 7 HOH A 9 409 22 HOH HOH . Q 7 HOH A 10 410 12 HOH HOH . R 7 HOH B 1 401 11 HOH HOH . R 7 HOH B 2 402 18 HOH HOH . R 7 HOH B 3 403 14 HOH HOH . R 7 HOH B 4 404 4 HOH HOH . R 7 HOH B 5 405 8 HOH HOH . R 7 HOH B 6 406 9 HOH HOH . R 7 HOH B 7 407 15 HOH HOH . R 7 HOH B 8 408 16 HOH HOH . R 7 HOH B 9 409 7 HOH HOH . R 7 HOH B 10 410 13 HOH HOH . R 7 HOH B 11 411 10 HOH HOH . R 7 HOH B 12 412 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N DAL . . . J 2 -32.051 -4.21 22.222 1 33.23 ? N DAL 301 B 1 HETATM 2 C CA DAL . . . J 2 -31.483 -5.265 21.379 1 28.31 ? CA DAL 301 B 1 HETATM 3 C CB DAL . . . J 2 -32.72 -5.938 20.845 1 29.19 ? CB DAL 301 B 1 HETATM 4 C C DAL . . . J 2 -30.724 -6.259 22.226 1 28.96 ? C DAL 301 B 1 HETATM 5 O O DAL . . . J 2 -30.361 -7.289 21.667 1 29.22 ? O DAL 301 B 1 HETATM 6 O OXT DAL . . . J 2 -30.47 -6.153 23.46 1 25.11 ? OXT DAL 301 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #