data_6A6K # _model_server_result.job_id tX2FpiaTAe9_vKN5WRxiqQ _model_server_result.datetime_utc '2024-12-26 11:44:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6a6k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 6A6K # _exptl.entry_id 6A6K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.619 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[(~{E})-5-oxidanyl-2-phenyl-1-[4-(4-propan-2-ylpiperazin-1-yl)phenyl]pent-1-enyl]phenol _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.19 _cell.angle_gamma 90 _cell.entry_id 6A6K _cell.length_a 105.828 _cell.length_b 78.571 _cell.length_c 106.963 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6A6K _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G 1 1 B,E,H 2 1 C,F,I 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C30 H36 N2 O2' _chem_comp.formula_weight 456.619 _chem_comp.id 9S6 _chem_comp.mon_nstd_flag . _chem_comp.name 3-[(~{E})-5-oxidanyl-2-phenyl-1-[4-(4-propan-2-ylpiperazin-1-yl)phenyl]pent-1-enyl]phenol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C13 9S6 doub 1 n y C12 C11 9S6 sing 2 n y C13 C14 9S6 sing 3 n y C13 C16 9S6 sing 4 n n C14 C15 9S6 doub 5 n y C17 C18 9S6 doub 6 n y C17 C22 9S6 sing 7 n y C17 C16 9S6 sing 8 n n C18 C19 9S6 sing 9 n y C22 C21 9S6 doub 10 n y C24 C25 9S6 sing 11 n n C24 C29 9S6 sing 12 n n C24 C16 9S6 doub 13 e n C25 C26 9S6 sing 14 n n C26 C27 9S6 sing 15 n n C27 O28 9S6 sing 16 n n C29 C30 9S6 doub 17 n y C29 C34 9S6 sing 18 n y C30 C31 9S6 sing 19 n y C31 C32 9S6 doub 20 n y C32 C33 9S6 sing 21 n y C34 C33 9S6 doub 22 n y C01 C02 9S6 sing 23 n n C02 C03 9S6 sing 24 n n C02 N04 9S6 sing 25 n n C05 C06 9S6 sing 26 n n C05 N04 9S6 sing 27 n n C06 N07 9S6 sing 28 n n C08 C09 9S6 sing 29 n n C08 N07 9S6 sing 30 n n C09 N04 9S6 sing 31 n n C10 C11 9S6 doub 32 n y C10 C15 9S6 sing 33 n y C10 N07 9S6 sing 34 n n C19 C20 9S6 doub 35 n y C19 O23 9S6 sing 36 n n C20 C21 9S6 sing 37 n y C12 H121 9S6 sing 38 n n C14 H141 9S6 sing 39 n n C18 H181 9S6 sing 40 n n C22 H221 9S6 sing 41 n n C25 H252 9S6 sing 42 n n C25 H251 9S6 sing 43 n n C26 H261 9S6 sing 44 n n C26 H262 9S6 sing 45 n n C27 H272 9S6 sing 46 n n C27 H271 9S6 sing 47 n n C30 H301 9S6 sing 48 n n C31 H311 9S6 sing 49 n n C32 H321 9S6 sing 50 n n C34 H341 9S6 sing 51 n n C01 H013 9S6 sing 52 n n C01 H011 9S6 sing 53 n n C01 H012 9S6 sing 54 n n C02 H021 9S6 sing 55 n n C03 H032 9S6 sing 56 n n C03 H031 9S6 sing 57 n n C03 H033 9S6 sing 58 n n C05 H051 9S6 sing 59 n n C05 H052 9S6 sing 60 n n C06 H061 9S6 sing 61 n n C06 H062 9S6 sing 62 n n C08 H081 9S6 sing 63 n n C08 H082 9S6 sing 64 n n C09 H092 9S6 sing 65 n n C09 H091 9S6 sing 66 n n C11 H111 9S6 sing 67 n n C15 H151 9S6 sing 68 n n C20 H201 9S6 sing 69 n n C21 H211 9S6 sing 70 n n C33 H331 9S6 sing 71 n n O23 H231 9S6 sing 72 n n O28 H281 9S6 sing 73 n n # _atom_sites.entry_id 6A6K _atom_sites.fract_transf_matrix[1][1] 0.009449 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003289 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012727 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009899 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 9S6 A 1 501 3 9S6 DN2 . E 2 9S6 B 1 501 2 9S6 DN2 . F 2 9S6 C 1 501 1 9S6 DN2 . G 3 HOH A 1 601 4 HOH HOH . G 3 HOH A 2 602 3 HOH HOH . H 3 HOH B 1 601 12 HOH HOH . H 3 HOH B 2 602 15 HOH HOH . H 3 HOH B 3 603 1 HOH HOH . I 3 HOH C 1 601 14 HOH HOH . I 3 HOH C 2 602 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C12 9S6 . . . D 2 68.188 -2.65 149.967 1 43.58 ? C12 9S6 501 A 1 HETATM 2 C C13 9S6 . . . D 2 68.105 -3.411 148.805 1 46.46 ? C13 9S6 501 A 1 HETATM 3 C C14 9S6 . . . D 2 68.558 -4.744 148.776 1 48.37 ? C14 9S6 501 A 1 HETATM 4 C C17 9S6 . . . D 2 68.279 -1.312 147.251 1 43.38 ? C17 9S6 501 A 1 HETATM 5 C C18 9S6 . . . D 2 69.677 -1.235 147.135 1 38.65 ? C18 9S6 501 A 1 HETATM 6 C C22 9S6 . . . D 2 67.548 -0.126 147.118 1 42.79 ? C22 9S6 501 A 1 HETATM 7 C C24 9S6 . . . D 2 66.576 -3.233 146.798 1 47.2 ? C24 9S6 501 A 1 HETATM 8 C C25 9S6 . . . D 2 66.121 -2.363 145.565 1 46.13 ? C25 9S6 501 A 1 HETATM 9 C C26 9S6 . . . D 2 64.94 -2.85 144.717 1 42.57 ? C26 9S6 501 A 1 HETATM 10 C C27 9S6 . . . D 2 64.309 -1.586 144.088 1 42.53 ? C27 9S6 501 A 1 HETATM 11 C C29 9S6 . . . D 2 65.875 -4.602 147.122 1 47.13 ? C29 9S6 501 A 1 HETATM 12 C C30 9S6 . . . D 2 66.222 -5.814 146.412 1 50.02 ? C30 9S6 501 A 1 HETATM 13 C C31 9S6 . . . D 2 65.597 -7.094 146.69 1 55.38 ? C31 9S6 501 A 1 HETATM 14 C C32 9S6 . . . D 2 64.647 -7.007 147.689 1 45.83 ? C32 9S6 501 A 1 HETATM 15 C C34 9S6 . . . D 2 64.846 -4.709 148.136 1 49.87 ? C34 9S6 501 A 1 HETATM 16 C C01 9S6 . . . D 2 72.275 -5.993 156.75 1 41.58 ? C01 9S6 501 A 1 HETATM 17 C C02 9S6 . . . D 2 71.333 -6.793 155.794 1 49.43 ? C02 9S6 501 A 1 HETATM 18 C C03 9S6 . . . D 2 71.813 -8.27 155.762 1 56.61 ? C03 9S6 501 A 1 HETATM 19 C C05 9S6 . . . D 2 70.778 -4.935 154.63 1 53.4 ? C05 9S6 501 A 1 HETATM 20 C C06 9S6 . . . D 2 70.344 -4.278 153.322 1 43.77 ? C06 9S6 501 A 1 HETATM 21 C C08 9S6 . . . D 2 70.533 -6.352 152.248 1 51.26 ? C08 9S6 501 A 1 HETATM 22 C C09 9S6 . . . D 2 70.792 -7.044 153.587 1 54.2 ? C09 9S6 501 A 1 HETATM 23 C C10 9S6 . . . D 2 69.171 -4.562 151.092 1 45.93 ? C10 9S6 501 A 1 HETATM 24 C C11 9S6 . . . D 2 68.723 -3.236 151.122 1 45.42 ? C11 9S6 501 A 1 HETATM 25 C C15 9S6 . . . D 2 69.103 -5.332 149.923 1 42.55 ? C15 9S6 501 A 1 HETATM 26 C C16 9S6 . . . D 2 67.56 -2.709 147.564 1 45.28 ? C16 9S6 501 A 1 HETATM 27 C C19 9S6 . . . D 2 70.288 0.002 146.867 1 42.76 ? C19 9S6 501 A 1 HETATM 28 C C20 9S6 . . . D 2 69.538 1.167 146.727 1 44.49 ? C20 9S6 501 A 1 HETATM 29 C C21 9S6 . . . D 2 68.167 1.111 146.851 1 39.67 ? C21 9S6 501 A 1 HETATM 30 C C33 9S6 . . . D 2 64.179 -5.956 148.464 1 51.19 ? C33 9S6 501 A 1 HETATM 31 N N04 9S6 . . . D 2 71.299 -6.224 154.581 1 56.96 ? N04 9S6 501 A 1 HETATM 32 N N07 9S6 . . . D 2 69.731 -5.157 152.352 1 45.13 ? N07 9S6 501 A 1 HETATM 33 O O23 9S6 . . . D 2 71.676 0.125 146.739 1 49.3 ? O23 9S6 501 A 1 HETATM 34 O O28 9S6 . . . D 2 64.088 -1.834 142.719 1 47.65 ? O28 9S6 501 A 1 HETATM 35 H H121 9S6 . . . D 2 67.898 -1.766 149.975 1 52.29 ? H121 9S6 501 A 1 HETATM 36 H H141 9S6 . . . D 2 68.512 -5.23 147.984 1 58.04 ? H141 9S6 501 A 1 HETATM 37 H H181 9S6 . . . D 2 70.196 -2.002 147.224 1 46.39 ? H181 9S6 501 A 1 HETATM 38 H H221 9S6 . . . D 2 66.622 -0.158 147.195 1 51.35 ? H221 9S6 501 A 1 HETATM 39 H H252 9S6 . . . D 2 65.898 -1.479 145.897 1 55.35 ? H252 9S6 501 A 1 HETATM 40 H H251 9S6 . . . D 2 66.885 -2.272 144.974 1 55.35 ? H251 9S6 501 A 1 HETATM 41 H H261 9S6 . . . D 2 65.254 -3.447 144.021 1 51.08 ? H261 9S6 501 A 1 HETATM 42 H H262 9S6 . . . D 2 64.29 -3.302 145.278 1 51.08 ? H262 9S6 501 A 1 HETATM 43 H H272 9S6 . . . D 2 64.912 -0.833 144.192 1 51.03 ? H272 9S6 501 A 1 HETATM 44 H H271 9S6 . . . D 2 63.465 -1.391 144.525 1 51.03 ? H271 9S6 501 A 1 HETATM 45 H H301 9S6 . . . D 2 66.88 -5.773 145.757 1 60.02 ? H301 9S6 501 A 1 HETATM 46 H H311 9S6 . . . D 2 65.811 -7.883 146.245 1 66.45 ? H311 9S6 501 A 1 HETATM 47 H H321 9S6 . . . D 2 65.059 -6.195 147.497 1 54.99 ? H321 9S6 501 A 1 HETATM 48 H H341 9S6 . . . D 2 64.606 -3.943 148.605 1 59.84 ? H341 9S6 501 A 1 HETATM 49 H H013 9S6 . . . D 2 71.776 -5.275 157.17 1 49.89 ? H013 9S6 501 A 1 HETATM 50 H H011 9S6 . . . D 2 73.012 -5.621 156.241 1 49.89 ? H011 9S6 501 A 1 HETATM 51 H H012 9S6 . . . D 2 72.622 -6.588 157.433 1 49.89 ? H012 9S6 501 A 1 HETATM 52 H H021 9S6 . . . D 2 70.436 -6.773 156.163 1 59.32 ? H021 9S6 501 A 1 HETATM 53 H H032 9S6 . . . D 2 72.445 -8.389 155.035 1 67.93 ? H032 9S6 501 A 1 HETATM 54 H H031 9S6 . . . D 2 71.051 -8.855 155.627 1 67.93 ? H031 9S6 501 A 1 HETATM 55 H H033 9S6 . . . D 2 72.244 -8.489 156.603 1 67.93 ? H033 9S6 501 A 1 HETATM 56 H H051 9S6 . . . D 2 70.007 -4.953 155.218 1 64.08 ? H051 9S6 501 A 1 HETATM 57 H H052 9S6 . . . D 2 71.451 -4.364 155.033 1 64.08 ? H052 9S6 501 A 1 HETATM 58 H H061 9S6 . . . D 2 71.126 -3.876 152.912 1 52.52 ? H061 9S6 501 A 1 HETATM 59 H H062 9S6 . . . D 2 69.711 -3.574 153.533 1 52.52 ? H062 9S6 501 A 1 HETATM 60 H H081 9S6 . . . D 2 70.079 -6.977 151.662 1 61.52 ? H081 9S6 501 A 1 HETATM 61 H H082 9S6 . . . D 2 71.387 -6.115 151.854 1 61.52 ? H082 9S6 501 A 1 HETATM 62 H H092 9S6 . . . D 2 71.421 -7.767 153.439 1 65.04 ? H092 9S6 501 A 1 HETATM 63 H H091 9S6 . . . D 2 69.955 -7.42 153.901 1 65.04 ? H091 9S6 501 A 1 HETATM 64 H H111 9S6 . . . D 2 68.779 -2.744 151.909 1 54.51 ? H111 9S6 501 A 1 HETATM 65 H H151 9S6 . . . D 2 69.394 -6.215 149.915 1 51.06 ? H151 9S6 501 A 1 HETATM 66 H H201 9S6 . . . D 2 69.96 1.978 146.554 1 53.39 ? H201 9S6 501 A 1 HETATM 67 H H211 9S6 . . . D 2 67.655 1.882 146.758 1 47.6 ? H211 9S6 501 A 1 HETATM 68 H H331 9S6 . . . D 2 63.52 -6.04 149.114 1 61.43 ? H331 9S6 501 A 1 HETATM 69 H H231 9S6 . . . D 2 72.055 -0.236 147.409 1 59.16 ? H231 9S6 501 A 1 HETATM 70 H H281 9S6 . . . D 2 64.349 -1.164 142.265 1 57.18 ? H281 9S6 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 70 #