data_6A7E # _model_server_result.job_id -xcRyqqA8vbbghayQ-vC2A _model_server_result.datetime_utc '2024-11-23 04:18:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6a7e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6A7E # _exptl.entry_id 6A7E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 424.499 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(4-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)-6-ethylpyrimidine-2,4-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6A7E _cell.length_a 84.755 _cell.length_b 84.755 _cell.length_c 77.726 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6A7E _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H28 N8 O2' _chem_comp.formula_weight 424.499 _chem_comp.id 9QR _chem_comp.mon_nstd_flag . _chem_comp.name 5-(4-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)-6-ethylpyrimidine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N8 C2 9QR sing 1 n n C2 N3 9QR doub 2 n y C2 N1 9QR sing 3 n y N3 C4 9QR sing 4 n y N1 C6 9QR doub 5 n y C4 C9 9QR sing 6 n n C4 C5 9QR doub 7 n y C10 C9 9QR sing 8 n n C6 C5 9QR sing 9 n y C6 N7 9QR sing 10 n n C5 O11 9QR sing 11 n n C30 C31 9QR sing 12 n n C30 C23 9QR sing 13 n n O11 C12 9QR sing 14 n n N24 C23 9QR doub 15 n y N24 C25 9QR sing 16 n y C23 C22 9QR sing 17 n y N29 C25 9QR sing 18 n n C12 C13 9QR sing 19 n n C25 N26 9QR doub 20 n y C22 C19 9QR sing 21 n n C22 C27 9QR doub 22 n y C18 C17 9QR doub 23 n y C18 C19 9QR sing 24 n y C17 C16 9QR sing 25 n y N26 C27 9QR sing 26 n y C19 C20 9QR doub 27 n y C27 N28 9QR sing 28 n n C13 C14 9QR sing 29 n n C16 C21 9QR doub 30 n y C16 O15 9QR sing 31 n n C20 C21 9QR sing 32 n y O15 C14 9QR sing 33 n n N7 H1 9QR sing 34 n n N7 H2 9QR sing 35 n n C12 H3 9QR sing 36 n n C12 H4 9QR sing 37 n n C21 H5 9QR sing 38 n n C31 H6 9QR sing 39 n n C31 H7 9QR sing 40 n n C31 H8 9QR sing 41 n n N8 H9 9QR sing 42 n n N8 H10 9QR sing 43 n n C9 H11 9QR sing 44 n n C9 H12 9QR sing 45 n n C10 H13 9QR sing 46 n n C10 H14 9QR sing 47 n n C10 H15 9QR sing 48 n n C13 H16 9QR sing 49 n n C13 H17 9QR sing 50 n n C14 H18 9QR sing 51 n n C14 H19 9QR sing 52 n n C20 H20 9QR sing 53 n n C17 H21 9QR sing 54 n n C18 H22 9QR sing 55 n n C30 H23 9QR sing 56 n n C30 H24 9QR sing 57 n n N28 H25 9QR sing 58 n n N28 H26 9QR sing 59 n n N29 H27 9QR sing 60 n n N29 H28 9QR sing 61 n n # _atom_sites.entry_id 6A7E _atom_sites.fract_transf_matrix[1][1] 0.011799 _atom_sites.fract_transf_matrix[1][2] 0.006812 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013624 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012866 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 9QR A 1 201 188 9QR PBT . C 3 NDP A 1 202 201 NDP NDP . D 4 HOH A 1 301 159 HOH HOH . D 4 HOH A 2 302 117 HOH HOH . D 4 HOH A 3 303 133 HOH HOH . D 4 HOH A 4 304 151 HOH HOH . D 4 HOH A 5 305 143 HOH HOH . D 4 HOH A 6 306 118 HOH HOH . D 4 HOH A 7 307 164 HOH HOH . D 4 HOH A 8 308 102 HOH HOH . D 4 HOH A 9 309 87 HOH HOH . D 4 HOH A 10 310 165 HOH HOH . D 4 HOH A 11 311 140 HOH HOH . D 4 HOH A 12 312 96 HOH HOH . D 4 HOH A 13 313 144 HOH HOH . D 4 HOH A 14 314 134 HOH HOH . D 4 HOH A 15 315 83 HOH HOH . D 4 HOH A 16 316 47 HOH HOH . D 4 HOH A 17 317 91 HOH HOH . D 4 HOH A 18 318 71 HOH HOH . D 4 HOH A 19 319 121 HOH HOH . D 4 HOH A 20 320 40 HOH HOH . D 4 HOH A 21 321 73 HOH HOH . D 4 HOH A 22 322 33 HOH HOH . D 4 HOH A 23 323 88 HOH HOH . D 4 HOH A 24 324 120 HOH HOH . D 4 HOH A 25 325 103 HOH HOH . D 4 HOH A 26 326 105 HOH HOH . D 4 HOH A 27 327 56 HOH HOH . D 4 HOH A 28 328 26 HOH HOH . D 4 HOH A 29 329 58 HOH HOH . D 4 HOH A 30 330 127 HOH HOH . D 4 HOH A 31 331 80 HOH HOH . D 4 HOH A 32 332 76 HOH HOH . D 4 HOH A 33 333 3 HOH HOH . D 4 HOH A 34 334 25 HOH HOH . D 4 HOH A 35 335 112 HOH HOH . D 4 HOH A 36 336 170 HOH HOH . D 4 HOH A 37 337 137 HOH HOH . D 4 HOH A 38 338 4 HOH HOH . D 4 HOH A 39 339 20 HOH HOH . D 4 HOH A 40 340 93 HOH HOH . D 4 HOH A 41 341 70 HOH HOH . D 4 HOH A 42 342 34 HOH HOH . D 4 HOH A 43 343 14 HOH HOH . D 4 HOH A 44 344 43 HOH HOH . D 4 HOH A 45 345 68 HOH HOH . D 4 HOH A 46 346 98 HOH HOH . D 4 HOH A 47 347 50 HOH HOH . D 4 HOH A 48 348 167 HOH HOH . D 4 HOH A 49 349 100 HOH HOH . D 4 HOH A 50 350 156 HOH HOH . D 4 HOH A 51 351 13 HOH HOH . D 4 HOH A 52 352 27 HOH HOH . D 4 HOH A 53 353 23 HOH HOH . D 4 HOH A 54 354 11 HOH HOH . D 4 HOH A 55 355 65 HOH HOH . D 4 HOH A 56 356 67 HOH HOH . D 4 HOH A 57 357 52 HOH HOH . D 4 HOH A 58 358 125 HOH HOH . D 4 HOH A 59 359 53 HOH HOH . D 4 HOH A 60 360 86 HOH HOH . D 4 HOH A 61 361 8 HOH HOH . D 4 HOH A 62 362 37 HOH HOH . D 4 HOH A 63 363 35 HOH HOH . D 4 HOH A 64 364 15 HOH HOH . D 4 HOH A 65 365 95 HOH HOH . D 4 HOH A 66 366 69 HOH HOH . D 4 HOH A 67 367 166 HOH HOH . D 4 HOH A 68 368 7 HOH HOH . D 4 HOH A 69 369 28 HOH HOH . D 4 HOH A 70 370 101 HOH HOH . D 4 HOH A 71 371 90 HOH HOH . D 4 HOH A 72 372 54 HOH HOH . D 4 HOH A 73 373 106 HOH HOH . D 4 HOH A 74 374 19 HOH HOH . D 4 HOH A 75 375 36 HOH HOH . D 4 HOH A 76 376 51 HOH HOH . D 4 HOH A 77 377 64 HOH HOH . D 4 HOH A 78 378 63 HOH HOH . D 4 HOH A 79 379 10 HOH HOH . D 4 HOH A 80 380 157 HOH HOH . D 4 HOH A 81 381 9 HOH HOH . D 4 HOH A 82 382 18 HOH HOH . D 4 HOH A 83 383 61 HOH HOH . D 4 HOH A 84 384 152 HOH HOH . D 4 HOH A 85 385 2 HOH HOH . D 4 HOH A 86 386 79 HOH HOH . D 4 HOH A 87 387 16 HOH HOH . D 4 HOH A 88 388 60 HOH HOH . D 4 HOH A 89 389 17 HOH HOH . D 4 HOH A 90 390 21 HOH HOH . D 4 HOH A 91 391 31 HOH HOH . D 4 HOH A 92 392 89 HOH HOH . D 4 HOH A 93 393 38 HOH HOH . D 4 HOH A 94 394 55 HOH HOH . D 4 HOH A 95 395 62 HOH HOH . D 4 HOH A 96 396 48 HOH HOH . D 4 HOH A 97 397 6 HOH HOH . D 4 HOH A 98 398 49 HOH HOH . D 4 HOH A 99 399 12 HOH HOH . D 4 HOH A 100 400 99 HOH HOH . D 4 HOH A 101 401 116 HOH HOH . D 4 HOH A 102 402 146 HOH HOH . D 4 HOH A 103 403 42 HOH HOH . D 4 HOH A 104 404 138 HOH HOH . D 4 HOH A 105 405 57 HOH HOH . D 4 HOH A 106 406 131 HOH HOH . D 4 HOH A 107 407 158 HOH HOH . D 4 HOH A 108 408 163 HOH HOH . D 4 HOH A 109 409 59 HOH HOH . D 4 HOH A 110 410 75 HOH HOH . D 4 HOH A 111 411 5 HOH HOH . D 4 HOH A 112 412 109 HOH HOH . D 4 HOH A 113 413 22 HOH HOH . D 4 HOH A 114 414 30 HOH HOH . D 4 HOH A 115 415 29 HOH HOH . D 4 HOH A 116 416 108 HOH HOH . D 4 HOH A 117 417 39 HOH HOH . D 4 HOH A 118 418 24 HOH HOH . D 4 HOH A 119 419 136 HOH HOH . D 4 HOH A 120 420 46 HOH HOH . D 4 HOH A 121 421 32 HOH HOH . D 4 HOH A 122 422 41 HOH HOH . D 4 HOH A 123 423 94 HOH HOH . D 4 HOH A 124 424 45 HOH HOH . D 4 HOH A 125 425 162 HOH HOH . D 4 HOH A 126 426 169 HOH HOH . D 4 HOH A 127 427 141 HOH HOH . D 4 HOH A 128 428 126 HOH HOH . D 4 HOH A 129 429 1 HOH HOH . D 4 HOH A 130 430 147 HOH HOH . D 4 HOH A 131 431 66 HOH HOH . D 4 HOH A 132 432 154 HOH HOH . D 4 HOH A 133 433 114 HOH HOH . D 4 HOH A 134 434 113 HOH HOH . D 4 HOH A 135 435 82 HOH HOH . D 4 HOH A 136 436 92 HOH HOH . D 4 HOH A 137 437 77 HOH HOH . D 4 HOH A 138 438 122 HOH HOH . D 4 HOH A 139 439 107 HOH HOH . D 4 HOH A 140 440 123 HOH HOH . D 4 HOH A 141 441 135 HOH HOH . D 4 HOH A 142 442 171 HOH HOH . D 4 HOH A 143 443 150 HOH HOH . D 4 HOH A 144 444 85 HOH HOH . D 4 HOH A 145 445 119 HOH HOH . D 4 HOH A 146 446 130 HOH HOH . D 4 HOH A 147 447 132 HOH HOH . D 4 HOH A 148 448 104 HOH HOH . D 4 HOH A 149 449 142 HOH HOH . D 4 HOH A 150 450 145 HOH HOH . D 4 HOH A 151 451 149 HOH HOH . D 4 HOH A 152 452 44 HOH HOH . D 4 HOH A 153 453 115 HOH HOH . D 4 HOH A 154 454 81 HOH HOH . D 4 HOH A 155 455 72 HOH HOH . D 4 HOH A 156 456 74 HOH HOH . D 4 HOH A 157 457 78 HOH HOH . D 4 HOH A 158 458 97 HOH HOH . D 4 HOH A 159 459 110 HOH HOH . D 4 HOH A 160 460 111 HOH HOH . D 4 HOH A 161 461 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 9QR . . . B 2 18.686 7.949 2.715 1 13.63 ? N1 9QR 201 A 1 HETATM 2 C C2 9QR . . . B 2 18.142 7.272 3.754 1 14.57 ? C2 9QR 201 A 1 HETATM 3 N N3 9QR . . . B 2 17.209 6.301 3.565 1 14.88 ? N3 9QR 201 A 1 HETATM 4 C C4 9QR . . . B 2 16.8 5.97 2.314 1 16.13 ? C4 9QR 201 A 1 HETATM 5 C C5 9QR . . . B 2 17.381 6.669 1.229 1 15.01 ? C5 9QR 201 A 1 HETATM 6 C C6 9QR . . . B 2 18.335 7.673 1.456 1 14.44 ? C6 9QR 201 A 1 HETATM 7 N N7 9QR . . . B 2 18.869 8.318 0.414 1 13.57 ? N7 9QR 201 A 1 HETATM 8 C C12 9QR . . . B 2 15.919 7.133 -0.602 1 16.82 ? C12 9QR 201 A 1 HETATM 9 C C21 9QR . . . B 2 11.676 4.662 -1.099 1 20.23 ? C21 9QR 201 A 1 HETATM 10 C C22 9QR . . . B 2 10.541 1.274 -0.063 1 23.09 ? C22 9QR 201 A 1 HETATM 11 C C31 9QR . . . B 2 10.693 1.802 3.149 1 28.67 ? C31 9QR 201 A 1 HETATM 12 N N8 9QR . . . B 2 18.521 7.593 4.985 1 14.23 ? N8 9QR 201 A 1 HETATM 13 C C9 9QR . . . B 2 15.871 4.916 2.149 1 17.05 ? C9 9QR 201 A 1 HETATM 14 C C10 9QR . . . B 2 14.455 5.419 2.41 1 18.54 ? C10 9QR 201 A 1 HETATM 15 O O11 9QR . . . B 2 17.054 6.391 -0.059 1 17.02 ? O11 9QR 201 A 1 HETATM 16 C C13 9QR . . . B 2 15.818 6.712 -2.073 1 18.02 ? C13 9QR 201 A 1 HETATM 17 C C14 9QR . . . B 2 15.138 5.337 -2.009 1 18.2 ? C14 9QR 201 A 1 HETATM 18 O O15 9QR . . . B 2 13.816 5.601 -1.541 1 19.35 ? O15 9QR 201 A 1 HETATM 19 C C16 9QR . . . B 2 13.055 4.5 -1.167 1 19.87 ? C16 9QR 201 A 1 HETATM 20 C C20 9QR . . . B 2 10.871 3.591 -0.707 1 21.02 ? C20 9QR 201 A 1 HETATM 21 C C17 9QR . . . B 2 13.604 3.233 -0.877 1 19.93 ? C17 9QR 201 A 1 HETATM 22 C C18 9QR . . . B 2 12.779 2.162 -0.494 1 21.22 ? C18 9QR 201 A 1 HETATM 23 C C19 9QR . . . B 2 11.406 2.338 -0.409 1 21.02 ? C19 9QR 201 A 1 HETATM 24 C C23 9QR . . . B 2 9.747 1.272 1.108 1 26.94 ? C23 9QR 201 A 1 HETATM 25 C C30 9QR . . . B 2 9.702 2.285 2.099 1 27.77 ? C30 9QR 201 A 1 HETATM 26 C C27 9QR . . . B 2 10.424 0.144 -0.888 1 23.76 ? C27 9QR 201 A 1 HETATM 27 N N28 9QR . . . B 2 11.154 0.065 -1.99 1 21.78 ? N28 9QR 201 A 1 HETATM 28 N N26 9QR . . . B 2 9.614 -0.897 -0.587 1 24.49 ? N26 9QR 201 A 1 HETATM 29 C C25 9QR . . . B 2 8.871 -0.855 0.52 1 26.16 ? C25 9QR 201 A 1 HETATM 30 N N24 9QR . . . B 2 8.948 0.205 1.34 1 26.85 ? N24 9QR 201 A 1 HETATM 31 N N29 9QR . . . B 2 8.059 -1.873 0.832 1 26.5 ? N29 9QR 201 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 31 #