data_6A8G # _model_server_result.job_id vaHX48JplNJ_G3CLN96dOw _model_server_result.datetime_utc '2024-11-22 09:44:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6a8g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":303}' # _entry.id 6A8G # _exptl.entry_id 6A8G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6A8G _cell.length_a 114.01 _cell.length_b 114.01 _cell.length_c 103.34 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6A8G _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,J,K 1 1 C,D,I,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2 P CYS 1 1_555 A SG CYS 11 P CYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf2 B SG CYS 32 A CYS 42 1_555 B SG CYS 48 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 B SG CYS 40 A CYS 50 1_555 B SG CYS 111 A CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf4 B SG CYS 136 A CYS 136 1_555 B SG CYS 205 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf5 B SG CYS 168 A CYS 168 1_555 B SG CYS 184 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf6 B SG CYS 195 A CYS 191 1_555 B SG CYS 223 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf7 C SG CYS 32 B CYS 42 1_555 C SG CYS 48 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf8 C SG CYS 40 B CYS 50 1_555 C SG CYS 111 B CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf9 C SG CYS 136 B CYS 136 1_555 C SG CYS 205 B CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf10 C SG CYS 168 B CYS 168 1_555 C SG CYS 184 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf11 C SG CYS 195 B CYS 191 1_555 C SG CYS 223 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf12 D SG CYS 2 E CYS 1 1_555 D SG CYS 11 E CYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 A C ACE 1 P ACE 0 1_555 A N CYS 2 P CYS 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale2 A C CYS 11 P CYS 10 1_555 A N NH2 12 P NH2 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 D C ACE 1 E ACE 0 1_555 D N CYS 2 E CYS 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 D C CYS 11 E CYS 10 1_555 D N NH2 12 E NH2 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 268 n n P O2 PO4 sing 269 n n P O3 PO4 sing 270 n n P O4 PO4 sing 271 n n # _atom_sites.entry_id 6A8G _atom_sites.fract_transf_matrix[1][1] 0.008771 _atom_sites.fract_transf_matrix[1][2] 0.005064 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010128 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009677 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PO4 P 1 101 304 PO4 PO4 . F 3 PO4 A 1 301 301 PO4 PO4 . G 3 PO4 A 1 302 302 PO4 PO4 . H 3 PO4 A 1 303 303 PO4 PO4 . I 3 PO4 B 1 301 301 PO4 PO4 . J 4 HOH P 1 201 101 HOH HOH . J 4 HOH P 2 202 102 HOH HOH . K 4 HOH A 1 401 410 HOH HOH . K 4 HOH A 2 402 403 HOH HOH . K 4 HOH A 3 403 402 HOH HOH . K 4 HOH A 4 404 411 HOH HOH . K 4 HOH A 5 405 407 HOH HOH . K 4 HOH A 6 406 409 HOH HOH . K 4 HOH A 7 407 401 HOH HOH . K 4 HOH A 8 408 413 HOH HOH . K 4 HOH A 9 409 417 HOH HOH . K 4 HOH A 10 410 408 HOH HOH . K 4 HOH A 11 411 406 HOH HOH . K 4 HOH A 12 412 412 HOH HOH . K 4 HOH A 13 413 405 HOH HOH . K 4 HOH A 14 414 414 HOH HOH . K 4 HOH A 15 415 404 HOH HOH . K 4 HOH A 16 416 415 HOH HOH . K 4 HOH A 17 417 419 HOH HOH . K 4 HOH A 18 418 416 HOH HOH . K 4 HOH A 19 419 418 HOH HOH . K 4 HOH A 20 420 420 HOH HOH . L 4 HOH B 1 401 404 HOH HOH . L 4 HOH B 2 402 402 HOH HOH . L 4 HOH B 3 403 405 HOH HOH . L 4 HOH B 4 404 403 HOH HOH . L 4 HOH B 5 405 408 HOH HOH . L 4 HOH B 6 406 406 HOH HOH . L 4 HOH B 7 407 409 HOH HOH . L 4 HOH B 8 408 410 HOH HOH . L 4 HOH B 9 409 411 HOH HOH . L 4 HOH B 10 410 401 HOH HOH . L 4 HOH B 11 411 407 HOH HOH . L 4 HOH B 12 412 412 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . H 3 39.256 -42.8 31.988 1 63.6 ? P PO4 303 A 1 HETATM 2 O O1 PO4 . . . H 3 39.692 -42.854 30.543 1 78.48 ? O1 PO4 303 A 1 HETATM 3 O O2 PO4 . . . H 3 37.785 -43.125 32.017 1 66.45 ? O2 PO4 303 A 1 HETATM 4 O O3 PO4 . . . H 3 39.442 -41.406 32.515 1 44.19 ? O3 PO4 303 A 1 HETATM 5 O O4 PO4 . . . H 3 40.046 -43.837 32.746 1 53.72 ? O4 PO4 303 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #