data_6A94 # _model_server_result.job_id Wn8c52NfjQzqTm2HbEnsbA _model_server_result.datetime_utc '2024-11-28 06:00:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6a94 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":3004}' # _entry.id 6A94 # _exptl.entry_id 6A94 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.16 _cell.angle_gamma 90 _cell.entry_id 6A94 _cell.length_a 279.18 _cell.length_b 42.22 _cell.length_c 91.71 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6A94 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F 1 1 B,G,H,I,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 82 A CYS 148 1_555 A SG CYS 161 A CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 A SG CYS 322 A CYS 349 1_555 A SG CYS 326 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 B SG CYS 82 B CYS 148 1_555 B SG CYS 161 B CYS 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 B SG CYS 322 B CYS 349 1_555 B SG CYS 326 B CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 B SG CYS 370 B CYS 397 1_555 H C1 PLM . B PLM 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.777 ? metalc ? metalc1 A NE2 HIS 116 A HIS 182 1_555 F ZN ZN . A ZN 3004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc2 A NE2 HIS 117 A HIS 183 1_555 F ZN ZN . A ZN 3004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc3 A OE2 GLU 198 A GLU 264 1_555 F ZN ZN . A ZN 3004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.88 ? metalc ? metalc4 A OE2 GLU 291 A GLU 318 1_555 F ZN ZN . A ZN 3004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id A6L _chem_comp.mon_nstd_flag . _chem_comp.name '2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms monoolein # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OXT C A6L doub 38 n n CA C A6L sing 39 n n CA C3 A6L sing 40 n n C O A6L sing 41 n n C4 C3 A6L sing 42 n n C4 C5 A6L sing 43 n n C6 C5 A6L sing 44 n n C6 C7 A6L sing 45 n n C17 C18 A6L sing 46 n n C17 C16 A6L sing 47 n n C16 C15 A6L sing 48 n n C8 C7 A6L sing 49 n n C8 C9 A6L sing 50 n n C14 C15 A6L sing 51 n n C14 C13 A6L sing 52 n n C9 C10 A6L doub 53 z n C12 C13 A6L sing 54 n n C12 C11 A6L sing 55 n n C10 C11 A6L sing 56 n n CA H1 A6L sing 57 n n CA H2 A6L sing 58 n n C3 H4 A6L sing 59 n n C3 H5 A6L sing 60 n n C4 H6 A6L sing 61 n n C4 H7 A6L sing 62 n n C5 H8 A6L sing 63 n n C5 H9 A6L sing 64 n n C6 H10 A6L sing 65 n n C6 H11 A6L sing 66 n n C7 H12 A6L sing 67 n n C7 H13 A6L sing 68 n n C8 H14 A6L sing 69 n n C8 H15 A6L sing 70 n n C9 H16 A6L sing 71 n n C10 H17 A6L sing 72 n n C11 H18 A6L sing 73 n n C11 H19 A6L sing 74 n n C12 H20 A6L sing 75 n n C12 H21 A6L sing 76 n n C13 H22 A6L sing 77 n n C13 H23 A6L sing 78 n n C14 H24 A6L sing 79 n n C14 H25 A6L sing 80 n n C15 H26 A6L sing 81 n n C15 H27 A6L sing 82 n n C16 H28 A6L sing 83 n n C16 H29 A6L sing 84 n n C17 H30 A6L sing 85 n n C17 H31 A6L sing 86 n n C18 H32 A6L sing 87 n n C18 H33 A6L sing 88 n n C18 H34 A6L sing 89 n n O C1 A6L sing 90 n n C1 C2 A6L sing 91 n n C2 C19 A6L sing 92 n n C19 O2 A6L sing 93 n n C2 O1 A6L sing 94 n n C1 H3 A6L sing 95 n n C1 H35 A6L sing 96 n n C2 H36 A6L sing 97 n n C19 H37 A6L sing 98 n n C19 H38 A6L sing 99 n n O2 H39 A6L sing 100 n n O1 H40 A6L sing 101 n n # _atom_sites.entry_id 6A94 _atom_sites.fract_transf_matrix[1][1] 0.003582 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000135 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023685 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010912 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZOT A 1 3001 3001 ZOT ZOT . D 3 CLR A 1 3002 2 CLR CLR . E 4 1PE A 1 3003 1 1PE 1PE . F 5 ZN A 1 3004 1 ZN ZN . G 2 ZOT B 1 3001 3001 ZOT ZOT . H 6 PLM B 1 3002 4001 PLM PLM . I 3 CLR B 1 3003 1 CLR CLR . J 7 A6L B 1 3004 1 A6L MON . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA A6L . . . J 7 44.32 -0.56 40.449 1 25.4 ? CA A6L 3004 B 1 HETATM 2 C C A6L . . . J 7 45.433 0.334 40.911 1 52.71 ? C A6L 3004 B 1 HETATM 3 O O A6L . . . J 7 45.364 1.172 41.804 1 55.16 ? O A6L 3004 B 1 HETATM 4 C C3 A6L . . . J 7 43.253 -0.784 41.524 1 13.15 ? C3 A6L 3004 B 1 HETATM 5 C C4 A6L . . . J 7 42.012 -1.541 41.021 1 3.21 ? C4 A6L 3004 B 1 HETATM 6 C C5 A6L . . . J 7 40.81 -1.384 41.964 1 1.41 ? C5 A6L 3004 B 1 HETATM 7 C C6 A6L . . . J 7 39.651 -2.332 41.634 1 6.09 ? C6 A6L 3004 B 1 HETATM 8 C C7 A6L . . . J 7 38.484 -2.232 42.635 1 17.95 ? C7 A6L 3004 B 1 HETATM 9 C C8 A6L . . . J 7 37.484 -3.408 42.581 1 30.29 ? C8 A6L 3004 B 1 HETATM 10 C C9 A6L . . . J 7 37.804 -4.568 43.468 1 38.32 ? C9 A6L 3004 B 1 HETATM 11 C C10 A6L . . . J 7 36.954 -5.295 44.208 1 49.17 ? C10 A6L 3004 B 1 HETATM 12 C C11 A6L . . . J 7 35.478 -5.132 44.347 1 50.64 ? C11 A6L 3004 B 1 HETATM 13 C C12 A6L . . . J 7 34.634 -6.116 43.502 1 55.6 ? C12 A6L 3004 B 1 HETATM 14 C C13 A6L . . . J 7 33.16 -6.13 43.952 1 53.26 ? C13 A6L 3004 B 1 HETATM 15 C C14 A6L . . . J 7 32.166 -5.721 42.851 1 41.41 ? C14 A6L 3004 B 1 HETATM 16 C C15 A6L . . . J 7 30.864 -6.507 42.964 1 44.79 ? C15 A6L 3004 B 1 HETATM 17 C C16 A6L . . . J 7 29.697 -5.827 42.244 1 51.41 ? C16 A6L 3004 B 1 HETATM 18 C C17 A6L . . . J 7 28.709 -6.855 41.673 1 49.62 ? C17 A6L 3004 B 1 HETATM 19 C C18 A6L . . . J 7 27.267 -6.558 42.063 1 45.33 ? C18 A6L 3004 B 1 HETATM 20 O OXT A6L . . . J 7 46.611 0.153 40.242 1 65.7 ? OXT A6L 3004 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 20 #