data_6AAL # _model_server_result.job_id YJTpBe1hcMwR9rjV3MAXPw _model_server_result.datetime_utc '2024-10-19 09:42:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6aal # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":309}' # _entry.id 6AAL # _exptl.entry_id 6AAL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AAL _cell.length_a 46.342 _cell.length_b 86 _cell.length_c 123.832 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AAL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 212 A CYS 212 1_555 A SG CYS 239 A CYS 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 B SG CYS 212 B CYS 212 1_555 B SG CYS 239 B CYS 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 89 n n C1 C2 EDO sing 90 n n C1 H11 EDO sing 91 n n C1 H12 EDO sing 92 n n O1 HO1 EDO sing 93 n n C2 O2 EDO sing 94 n n C2 H21 EDO sing 95 n n C2 H22 EDO sing 96 n n O2 HO2 EDO sing 97 n n # _atom_sites.entry_id 6AAL _atom_sites.fract_transf_matrix[1][1] 0.021579 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011628 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008075 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 301 245 EDO EDO . D 3 SO4 A 1 302 246 SO4 SO4 . E 3 SO4 A 1 303 247 SO4 SO4 . F 4 ARG A 1 304 251 ARG ARG . G 2 EDO A 1 305 253 EDO EDO . H 2 EDO A 1 306 256 EDO EDO . I 2 EDO A 1 307 257 EDO EDO . J 2 EDO A 1 308 258 EDO EDO . K 2 EDO A 1 309 259 EDO EDO . L 2 EDO A 1 310 260 EDO EDO . M 2 EDO A 1 311 262 EDO EDO . N 2 EDO A 1 312 263 EDO EDO . O 2 EDO A 1 313 264 EDO EDO . P 5 ACT A 1 314 267 ACT ACT . Q 3 SO4 B 1 301 247 SO4 SO4 . R 3 SO4 B 1 302 248 SO4 SO4 . S 2 EDO B 1 303 261 EDO EDO . T 5 ACT B 1 304 270 ACT ACT . U 5 ACT B 1 305 272 ACT ACT . V 5 ACT B 1 306 274 ACT ACT . W 5 ACT B 1 307 276 ACT ACT . X 6 HOH A 1 401 32 HOH HOH . X 6 HOH A 2 402 119 HOH HOH . X 6 HOH A 3 403 122 HOH HOH . X 6 HOH A 4 404 35 HOH HOH . X 6 HOH A 5 405 73 HOH HOH . X 6 HOH A 6 406 57 HOH HOH . X 6 HOH A 7 407 120 HOH HOH . X 6 HOH A 8 408 87 HOH HOH . X 6 HOH A 9 409 54 HOH HOH . X 6 HOH A 10 410 116 HOH HOH . X 6 HOH A 11 411 2 HOH HOH . X 6 HOH A 12 412 14 HOH HOH . X 6 HOH A 13 413 56 HOH HOH . X 6 HOH A 14 414 103 HOH HOH . X 6 HOH A 15 415 95 HOH HOH . X 6 HOH A 16 416 82 HOH HOH . X 6 HOH A 17 417 7 HOH HOH . X 6 HOH A 18 418 108 HOH HOH . X 6 HOH A 19 419 28 HOH HOH . X 6 HOH A 20 420 40 HOH HOH . X 6 HOH A 21 421 118 HOH HOH . X 6 HOH A 22 422 33 HOH HOH . X 6 HOH A 23 423 101 HOH HOH . X 6 HOH A 24 424 11 HOH HOH . X 6 HOH A 25 425 121 HOH HOH . X 6 HOH A 26 426 75 HOH HOH . X 6 HOH A 27 427 107 HOH HOH . X 6 HOH A 28 428 36 HOH HOH . X 6 HOH A 29 429 86 HOH HOH . X 6 HOH A 30 430 24 HOH HOH . X 6 HOH A 31 431 78 HOH HOH . X 6 HOH A 32 432 72 HOH HOH . X 6 HOH A 33 433 92 HOH HOH . X 6 HOH A 34 434 117 HOH HOH . X 6 HOH A 35 435 6 HOH HOH . X 6 HOH A 36 436 109 HOH HOH . X 6 HOH A 37 437 37 HOH HOH . X 6 HOH A 38 438 106 HOH HOH . X 6 HOH A 39 439 83 HOH HOH . X 6 HOH A 40 440 44 HOH HOH . X 6 HOH A 41 441 69 HOH HOH . Y 6 HOH B 1 401 71 HOH HOH . Y 6 HOH B 2 402 67 HOH HOH . Y 6 HOH B 3 403 34 HOH HOH . Y 6 HOH B 4 404 43 HOH HOH . Y 6 HOH B 5 405 21 HOH HOH . Y 6 HOH B 6 406 63 HOH HOH . Y 6 HOH B 7 407 98 HOH HOH . Y 6 HOH B 8 408 25 HOH HOH . Y 6 HOH B 9 409 100 HOH HOH . Y 6 HOH B 10 410 48 HOH HOH . Y 6 HOH B 11 411 110 HOH HOH . Y 6 HOH B 12 412 70 HOH HOH . Y 6 HOH B 13 413 93 HOH HOH . Y 6 HOH B 14 414 88 HOH HOH . Y 6 HOH B 15 415 80 HOH HOH . Y 6 HOH B 16 416 26 HOH HOH . Y 6 HOH B 17 417 17 HOH HOH . Y 6 HOH B 18 418 64 HOH HOH . Y 6 HOH B 19 419 96 HOH HOH . Y 6 HOH B 20 420 123 HOH HOH . Y 6 HOH B 21 421 99 HOH HOH . Y 6 HOH B 22 422 112 HOH HOH . Y 6 HOH B 23 423 31 HOH HOH . Y 6 HOH B 24 424 104 HOH HOH . Y 6 HOH B 25 425 111 HOH HOH . Y 6 HOH B 26 426 105 HOH HOH . Y 6 HOH B 27 427 42 HOH HOH . Y 6 HOH B 28 428 60 HOH HOH . Y 6 HOH B 29 429 41 HOH HOH . Y 6 HOH B 30 430 68 HOH HOH . Y 6 HOH B 31 431 102 HOH HOH . Y 6 HOH B 32 432 114 HOH HOH . Y 6 HOH B 33 433 97 HOH HOH . Y 6 HOH B 34 434 18 HOH HOH . Y 6 HOH B 35 435 8 HOH HOH . Y 6 HOH B 36 436 113 HOH HOH . Y 6 HOH B 37 437 22 HOH HOH . Y 6 HOH B 38 438 16 HOH HOH . Y 6 HOH B 39 439 76 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . K 2 3.582 -2.827 23.256 1 46.44 ? C1 EDO 309 A 1 HETATM 2 O O1 EDO . . . K 2 4.759 -2.014 23.291 1 44.66 ? O1 EDO 309 A 1 HETATM 3 C C2 EDO . . . K 2 2.521 -2.163 24.113 1 47.86 ? C2 EDO 309 A 1 HETATM 4 O O2 EDO . . . K 2 1.505 -1.637 23.251 1 48.83 ? O2 EDO 309 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #