data_6AB8 # _model_server_result.job_id npyRksd-bYgk2EATQx8_7g _model_server_result.datetime_utc '2025-01-11 12:49:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ab8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":507}' # _entry.id 6AB8 # _exptl.entry_id 6AB8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.83 _cell.angle_gamma 90 _cell.entry_id 6AB8 _cell.length_a 102.134 _cell.length_b 43.893 _cell.length_c 62.07 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AB8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -9.527947 0 61.334355 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O PRO 24 A PRO 204 1_555 H K K . A K 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? metalc ? metalc2 A O ASP 26 A ASP 206 1_555 H K K . A K 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc3 A O GLU 161 A GLU 341 1_555 I K K . A K 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.943 ? metalc ? metalc4 A OE1 GLU 161 A GLU 341 1_555 I K K . A K 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.3 ? metalc ? metalc5 A OE2 GLU 216 A GLU 396 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc6 A OE1 GLU 216 A GLU 396 1_555 D MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc7 A OG SER 219 A SER 399 1_555 C MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? metalc ? metalc8 A O ARG 262 A ARG 442 1_555 I K K . A K 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.821 ? metalc ? metalc9 B MG MG . A MG 501 1_555 E O2B ATP . A ATP 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc10 B MG MG . A MG 501 1_555 E O2G ATP . A ATP 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc11 B MG MG . A MG 501 1_555 J O HOH . A HOH 613 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc12 B MG MG . A MG 501 1_555 J O HOH . A HOH 697 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc13 B MG MG . A MG 501 1_555 J O HOH . A HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc14 B MG MG . A MG 501 1_555 J O HOH . A HOH 743 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc15 C MG MG . A MG 502 1_555 E O1B ATP . A ATP 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc16 C MG MG . A MG 502 1_555 E O1A ATP . A ATP 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc17 C MG MG . A MG 502 1_555 J O HOH . A HOH 656 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc18 C MG MG . A MG 502 1_555 J O HOH . A HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc19 D MG MG . A MG 503 1_555 E O1G ATP . A ATP 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc20 D MG MG . A MG 503 1_555 E O1B ATP . A ATP 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc21 D MG MG . A MG 503 1_555 J O HOH . A HOH 656 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc22 D MG MG . A MG 503 1_555 J O HOH . A HOH 750 4_456 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc23 D MG MG . A MG 503 1_555 J O HOH . A HOH 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc24 H K K . A K 507 1_555 J O HOH . A HOH 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc25 I K K . A K 508 1_555 J O HOH . A HOH 646 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.38 ? metalc ? metalc26 I K K . A K 508 1_555 J O HOH . A HOH 756 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6AB8 _atom_sites.fract_transf_matrix[1][1] 0.009791 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001521 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022783 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016304 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 501 500 MG MG . C 2 MG A 1 502 501 MG MG . D 2 MG A 1 503 502 MG MG . E 3 ATP A 1 504 900 ATP ATP . F 4 9VC A 1 505 1 9VC LIG . G 4 9VC A 1 506 1 9VC LIG . H 5 K A 1 507 29 K K . I 5 K A 1 508 69 K K . J 6 HOH A 1 601 66 HOH HOH . J 6 HOH A 2 602 123 HOH HOH . J 6 HOH A 3 603 105 HOH HOH . J 6 HOH A 4 604 194 HOH HOH . J 6 HOH A 5 605 195 HOH HOH . J 6 HOH A 6 606 32 HOH HOH . J 6 HOH A 7 607 200 HOH HOH . J 6 HOH A 8 608 139 HOH HOH . J 6 HOH A 9 609 135 HOH HOH . J 6 HOH A 10 610 146 HOH HOH . J 6 HOH A 11 611 37 HOH HOH . J 6 HOH A 12 612 60 HOH HOH . J 6 HOH A 13 613 3 HOH HOH . J 6 HOH A 14 614 117 HOH HOH . J 6 HOH A 15 615 5 HOH HOH . J 6 HOH A 16 616 19 HOH HOH . J 6 HOH A 17 617 115 HOH HOH . J 6 HOH A 18 618 114 HOH HOH . J 6 HOH A 19 619 197 HOH HOH . J 6 HOH A 20 620 72 HOH HOH . J 6 HOH A 21 621 101 HOH HOH . J 6 HOH A 22 622 158 HOH HOH . J 6 HOH A 23 623 201 HOH HOH . J 6 HOH A 24 624 191 HOH HOH . J 6 HOH A 25 625 102 HOH HOH . J 6 HOH A 26 626 63 HOH HOH . J 6 HOH A 27 627 119 HOH HOH . J 6 HOH A 28 628 35 HOH HOH . J 6 HOH A 29 629 132 HOH HOH . J 6 HOH A 30 630 71 HOH HOH . J 6 HOH A 31 631 134 HOH HOH . J 6 HOH A 32 632 95 HOH HOH . J 6 HOH A 33 633 109 HOH HOH . J 6 HOH A 34 634 166 HOH HOH . J 6 HOH A 35 635 43 HOH HOH . J 6 HOH A 36 636 80 HOH HOH . J 6 HOH A 37 637 153 HOH HOH . J 6 HOH A 38 638 38 HOH HOH . J 6 HOH A 39 639 50 HOH HOH . J 6 HOH A 40 640 27 HOH HOH . J 6 HOH A 41 641 89 HOH HOH . J 6 HOH A 42 642 2 HOH HOH . J 6 HOH A 43 643 67 HOH HOH . J 6 HOH A 44 644 53 HOH HOH . J 6 HOH A 45 645 111 HOH HOH . J 6 HOH A 46 646 10 HOH HOH . J 6 HOH A 47 647 125 HOH HOH . J 6 HOH A 48 648 138 HOH HOH . J 6 HOH A 49 649 20 HOH HOH . J 6 HOH A 50 650 22 HOH HOH . J 6 HOH A 51 651 77 HOH HOH . J 6 HOH A 52 652 34 HOH HOH . J 6 HOH A 53 653 100 HOH HOH . J 6 HOH A 54 654 84 HOH HOH . J 6 HOH A 55 655 106 HOH HOH . J 6 HOH A 56 656 6 HOH HOH . J 6 HOH A 57 657 133 HOH HOH . J 6 HOH A 58 658 159 HOH HOH . J 6 HOH A 59 659 4 HOH HOH . J 6 HOH A 60 660 45 HOH HOH . J 6 HOH A 61 661 97 HOH HOH . J 6 HOH A 62 662 65 HOH HOH . J 6 HOH A 63 663 141 HOH HOH . J 6 HOH A 64 664 26 HOH HOH . J 6 HOH A 65 665 41 HOH HOH . J 6 HOH A 66 666 74 HOH HOH . J 6 HOH A 67 667 177 HOH HOH . J 6 HOH A 68 668 103 HOH HOH . J 6 HOH A 69 669 88 HOH HOH . J 6 HOH A 70 670 36 HOH HOH . J 6 HOH A 71 671 116 HOH HOH . J 6 HOH A 72 672 1 HOH HOH . J 6 HOH A 73 673 15 HOH HOH . J 6 HOH A 74 674 52 HOH HOH . J 6 HOH A 75 675 110 HOH HOH . J 6 HOH A 76 676 112 HOH HOH . J 6 HOH A 77 677 21 HOH HOH . J 6 HOH A 78 678 47 HOH HOH . J 6 HOH A 79 679 149 HOH HOH . J 6 HOH A 80 680 104 HOH HOH . J 6 HOH A 81 681 203 HOH HOH . J 6 HOH A 82 682 154 HOH HOH . J 6 HOH A 83 683 144 HOH HOH . J 6 HOH A 84 684 124 HOH HOH . J 6 HOH A 85 685 188 HOH HOH . J 6 HOH A 86 686 49 HOH HOH . J 6 HOH A 87 687 156 HOH HOH . J 6 HOH A 88 688 99 HOH HOH . J 6 HOH A 89 689 24 HOH HOH . J 6 HOH A 90 690 51 HOH HOH . J 6 HOH A 91 691 7 HOH HOH . J 6 HOH A 92 692 62 HOH HOH . J 6 HOH A 93 693 187 HOH HOH . J 6 HOH A 94 694 163 HOH HOH . J 6 HOH A 95 695 157 HOH HOH . J 6 HOH A 96 696 29 HOH HOH . J 6 HOH A 97 697 120 HOH HOH . J 6 HOH A 98 698 82 HOH HOH . J 6 HOH A 99 699 48 HOH HOH . J 6 HOH A 100 700 175 HOH HOH . J 6 HOH A 101 701 155 HOH HOH . J 6 HOH A 102 702 59 HOH HOH . J 6 HOH A 103 703 12 HOH HOH . J 6 HOH A 104 704 11 HOH HOH . J 6 HOH A 105 705 13 HOH HOH . J 6 HOH A 106 706 25 HOH HOH . J 6 HOH A 107 707 136 HOH HOH . J 6 HOH A 108 708 54 HOH HOH . J 6 HOH A 109 709 8 HOH HOH . J 6 HOH A 110 710 28 HOH HOH . J 6 HOH A 111 711 96 HOH HOH . J 6 HOH A 112 712 30 HOH HOH . J 6 HOH A 113 713 40 HOH HOH . J 6 HOH A 114 714 93 HOH HOH . J 6 HOH A 115 715 44 HOH HOH . J 6 HOH A 116 716 164 HOH HOH . J 6 HOH A 117 717 68 HOH HOH . J 6 HOH A 118 718 137 HOH HOH . J 6 HOH A 119 719 73 HOH HOH . J 6 HOH A 120 720 130 HOH HOH . J 6 HOH A 121 721 85 HOH HOH . J 6 HOH A 122 722 184 HOH HOH . J 6 HOH A 123 723 167 HOH HOH . J 6 HOH A 124 724 33 HOH HOH . J 6 HOH A 125 725 173 HOH HOH . J 6 HOH A 126 726 18 HOH HOH . J 6 HOH A 127 727 9 HOH HOH . J 6 HOH A 128 728 92 HOH HOH . J 6 HOH A 129 729 98 HOH HOH . J 6 HOH A 130 730 42 HOH HOH . J 6 HOH A 131 731 150 HOH HOH . J 6 HOH A 132 732 39 HOH HOH . J 6 HOH A 133 733 142 HOH HOH . J 6 HOH A 134 734 94 HOH HOH . J 6 HOH A 135 735 107 HOH HOH . J 6 HOH A 136 736 81 HOH HOH . J 6 HOH A 137 737 193 HOH HOH . J 6 HOH A 138 738 185 HOH HOH . J 6 HOH A 139 739 168 HOH HOH . J 6 HOH A 140 740 17 HOH HOH . J 6 HOH A 141 741 128 HOH HOH . J 6 HOH A 142 742 23 HOH HOH . J 6 HOH A 143 743 16 HOH HOH . J 6 HOH A 144 744 140 HOH HOH . J 6 HOH A 145 745 172 HOH HOH . J 6 HOH A 146 746 14 HOH HOH . J 6 HOH A 147 747 129 HOH HOH . J 6 HOH A 148 748 79 HOH HOH . J 6 HOH A 149 749 108 HOH HOH . J 6 HOH A 150 750 69 HOH HOH . J 6 HOH A 151 751 56 HOH HOH . J 6 HOH A 152 752 127 HOH HOH . J 6 HOH A 153 753 55 HOH HOH . J 6 HOH A 154 754 180 HOH HOH . J 6 HOH A 155 755 151 HOH HOH . J 6 HOH A 156 756 171 HOH HOH . J 6 HOH A 157 757 64 HOH HOH . J 6 HOH A 158 758 70 HOH HOH . J 6 HOH A 159 759 31 HOH HOH . J 6 HOH A 160 760 178 HOH HOH . J 6 HOH A 161 761 86 HOH HOH . J 6 HOH A 162 762 126 HOH HOH . J 6 HOH A 163 763 83 HOH HOH . J 6 HOH A 164 764 90 HOH HOH . J 6 HOH A 165 765 161 HOH HOH . J 6 HOH A 166 766 160 HOH HOH . J 6 HOH A 167 767 122 HOH HOH . J 6 HOH A 168 768 58 HOH HOH . J 6 HOH A 169 769 57 HOH HOH . J 6 HOH A 170 770 182 HOH HOH . J 6 HOH A 171 771 198 HOH HOH . J 6 HOH A 172 772 143 HOH HOH . J 6 HOH A 173 773 148 HOH HOH . J 6 HOH A 174 774 75 HOH HOH . J 6 HOH A 175 775 121 HOH HOH . J 6 HOH A 176 776 76 HOH HOH . J 6 HOH A 177 777 91 HOH HOH . J 6 HOH A 178 778 113 HOH HOH . J 6 HOH A 179 779 174 HOH HOH . J 6 HOH A 180 780 196 HOH HOH . J 6 HOH A 181 781 162 HOH HOH . J 6 HOH A 182 782 199 HOH HOH . J 6 HOH A 183 783 202 HOH HOH . J 6 HOH A 184 784 165 HOH HOH . J 6 HOH A 185 785 152 HOH HOH . J 6 HOH A 186 786 176 HOH HOH . J 6 HOH A 187 787 46 HOH HOH . J 6 HOH A 188 788 181 HOH HOH . J 6 HOH A 189 789 170 HOH HOH . J 6 HOH A 190 790 189 HOH HOH . J 6 HOH A 191 791 147 HOH HOH . J 6 HOH A 192 792 87 HOH HOH . J 6 HOH A 193 793 183 HOH HOH . J 6 HOH A 194 794 169 HOH HOH . J 6 HOH A 195 795 190 HOH HOH . J 6 HOH A 196 796 192 HOH HOH . J 6 HOH A 197 797 204 HOH HOH . J 6 HOH A 198 798 78 HOH HOH . J 6 HOH A 199 799 179 HOH HOH . J 6 HOH A 200 800 131 HOH HOH . J 6 HOH A 201 801 145 HOH HOH . J 6 HOH A 202 802 61 HOH HOH . J 6 HOH A 203 803 118 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 5 _atom_site.Cartn_x -32.91 _atom_site.Cartn_y 5.972 _atom_site.Cartn_z 42.432 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 67.05 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 507 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #