data_6ABP
#
_model_server_result.job_id            HJC6isk4b2ImWH81gwYucQ 
_model_server_result.datetime_utc      '2024-10-19 17:35:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6abp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":308}' 
#
_entry.id    6ABP 
#
_exptl.entry_id    6ABP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              150.13 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            beta-L-arabinopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6ABP 
_cell.length_a            55.54 
_cell.length_b            72.12 
_cell.length_c            78.02 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ABP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C5 H10 O5' 
_chem_comp.formula_weight    150.13 
_chem_comp.id                ARB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              beta-L-arabinopyranose 
_chem_comp.type              'l-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     beta-L-arabinose;L-arabinose;arabinose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 ARB sing 33 n n 
C1 O1 ARB sing 34 n n 
C1 O5 ARB sing 35 n n 
C1 H1 ARB sing 36 n n 
C2 C3 ARB sing 37 n n 
C2 O2 ARB sing 38 n n 
C2 H2 ARB sing 39 n n 
C3 C4 ARB sing 40 n n 
C3 O3 ARB sing 41 n n 
C3 H3 ARB sing 42 n n 
C4 C5 ARB sing 43 n n 
C4 O4 ARB sing 44 n n 
C4 H4 ARB sing 45 n n 
C5 O5 ARB sing 46 n n 
C5 H51 ARB sing 47 n n 
C5 H52 ARB sing 48 n n 
O1 HO1 ARB sing 49 n n 
O2 HO2 ARB sing 50 n n 
O3 HO3 ARB sing 51 n n 
O4 HO4 ARB sing 52 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
ARB LArapb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
ARB b-L-arabinopyranose 'COMMON NAME' GMML 1 
ARB b-L-Arap 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
ARB Ara 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     6ABP 
_atom_sites.fract_transf_matrix[1][1]    0.018005 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013866 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012817 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ARA A 1 307 307 ARA ARA . 
C 3 ARB A 1 308 308 ARB ARB . 
D 4 HOH A 1 309 309 HOH HOH . 
D 4 HOH A 2 310 310 HOH HOH . 
D 4 HOH A 3 311 311 HOH HOH . 
D 4 HOH A 4 312 312 HOH HOH . 
D 4 HOH A 5 313 313 HOH HOH . 
D 4 HOH A 6 314 314 HOH HOH . 
D 4 HOH A 7 315 315 HOH HOH . 
D 4 HOH A 8 316 316 HOH HOH . 
D 4 HOH A 9 317 317 HOH HOH . 
D 4 HOH A 10 318 318 HOH HOH . 
D 4 HOH A 11 319 319 HOH HOH . 
D 4 HOH A 12 320 320 HOH HOH . 
D 4 HOH A 13 321 321 HOH HOH . 
D 4 HOH A 14 322 322 HOH HOH . 
D 4 HOH A 15 323 323 HOH HOH . 
D 4 HOH A 16 324 324 HOH HOH . 
D 4 HOH A 17 325 325 HOH HOH . 
D 4 HOH A 18 326 326 HOH HOH . 
D 4 HOH A 19 327 327 HOH HOH . 
D 4 HOH A 20 328 328 HOH HOH . 
D 4 HOH A 21 329 329 HOH HOH . 
D 4 HOH A 22 330 330 HOH HOH . 
D 4 HOH A 23 331 331 HOH HOH . 
D 4 HOH A 24 332 332 HOH HOH . 
D 4 HOH A 25 333 333 HOH HOH . 
D 4 HOH A 26 334 334 HOH HOH . 
D 4 HOH A 27 335 335 HOH HOH . 
D 4 HOH A 28 336 336 HOH HOH . 
D 4 HOH A 29 337 337 HOH HOH . 
D 4 HOH A 30 338 338 HOH HOH . 
D 4 HOH A 31 339 339 HOH HOH . 
D 4 HOH A 32 340 340 HOH HOH . 
D 4 HOH A 33 341 341 HOH HOH . 
D 4 HOH A 34 342 342 HOH HOH . 
D 4 HOH A 35 343 343 HOH HOH . 
D 4 HOH A 36 344 344 HOH HOH . 
D 4 HOH A 37 345 345 HOH HOH . 
D 4 HOH A 38 346 346 HOH HOH . 
D 4 HOH A 39 347 347 HOH HOH . 
D 4 HOH A 40 348 348 HOH HOH . 
D 4 HOH A 41 349 349 HOH HOH . 
D 4 HOH A 42 350 350 HOH HOH . 
D 4 HOH A 43 351 351 HOH HOH . 
D 4 HOH A 44 352 352 HOH HOH . 
D 4 HOH A 45 353 353 HOH HOH . 
D 4 HOH A 46 354 354 HOH HOH . 
D 4 HOH A 47 355 355 HOH HOH . 
D 4 HOH A 48 356 356 HOH HOH . 
D 4 HOH A 49 357 357 HOH HOH . 
D 4 HOH A 50 358 358 HOH HOH . 
D 4 HOH A 51 359 359 HOH HOH . 
D 4 HOH A 52 360 360 HOH HOH . 
D 4 HOH A 53 361 361 HOH HOH . 
D 4 HOH A 54 362 362 HOH HOH . 
D 4 HOH A 55 363 363 HOH HOH . 
D 4 HOH A 56 364 364 HOH HOH . 
D 4 HOH A 57 365 365 HOH HOH . 
D 4 HOH A 58 366 366 HOH HOH . 
D 4 HOH A 59 367 367 HOH HOH . 
D 4 HOH A 60 368 368 HOH HOH . 
D 4 HOH A 61 369 369 HOH HOH . 
D 4 HOH A 62 370 370 HOH HOH . 
D 4 HOH A 63 371 371 HOH HOH . 
D 4 HOH A 64 372 372 HOH HOH . 
D 4 HOH A 65 373 373 HOH HOH . 
D 4 HOH A 66 374 374 HOH HOH . 
D 4 HOH A 67 375 375 HOH HOH . 
D 4 HOH A 68 376 376 HOH HOH . 
D 4 HOH A 69 377 377 HOH HOH . 
D 4 HOH A 70 378 378 HOH HOH . 
D 4 HOH A 71 379 379 HOH HOH . 
D 4 HOH A 72 380 380 HOH HOH . 
D 4 HOH A 73 381 381 HOH HOH . 
D 4 HOH A 74 382 382 HOH HOH . 
D 4 HOH A 75 383 383 HOH HOH . 
D 4 HOH A 76 384 384 HOH HOH . 
D 4 HOH A 77 385 385 HOH HOH . 
D 4 HOH A 78 386 386 HOH HOH . 
D 4 HOH A 79 387 387 HOH HOH . 
D 4 HOH A 80 388 388 HOH HOH . 
D 4 HOH A 81 389 389 HOH HOH . 
D 4 HOH A 82 390 390 HOH HOH . 
D 4 HOH A 83 391 391 HOH HOH . 
D 4 HOH A 84 392 392 HOH HOH . 
D 4 HOH A 85 393 393 HOH HOH . 
D 4 HOH A 86 394 394 HOH HOH . 
D 4 HOH A 87 395 395 HOH HOH . 
D 4 HOH A 88 396 396 HOH HOH . 
D 4 HOH A 89 397 397 HOH HOH . 
D 4 HOH A 90 398 398 HOH HOH . 
D 4 HOH A 91 399 399 HOH HOH . 
D 4 HOH A 92 400 400 HOH HOH . 
D 4 HOH A 93 401 401 HOH HOH . 
D 4 HOH A 94 402 402 HOH HOH . 
D 4 HOH A 95 403 403 HOH HOH . 
D 4 HOH A 96 404 404 HOH HOH . 
D 4 HOH A 97 405 405 HOH HOH . 
D 4 HOH A 98 406 406 HOH HOH . 
D 4 HOH A 99 407 407 HOH HOH . 
D 4 HOH A 100 408 408 HOH HOH . 
D 4 HOH A 101 409 409 HOH HOH . 
D 4 HOH A 102 410 410 HOH HOH . 
D 4 HOH A 103 411 411 HOH HOH . 
D 4 HOH A 104 412 412 HOH HOH . 
D 4 HOH A 105 413 413 HOH HOH . 
D 4 HOH A 106 414 414 HOH HOH . 
D 4 HOH A 107 415 415 HOH HOH . 
D 4 HOH A 108 416 416 HOH HOH . 
D 4 HOH A 109 417 417 HOH HOH . 
D 4 HOH A 110 418 418 HOH HOH . 
D 4 HOH A 111 419 419 HOH HOH . 
D 4 HOH A 112 420 420 HOH HOH . 
D 4 HOH A 113 421 421 HOH HOH . 
D 4 HOH A 114 422 422 HOH HOH . 
D 4 HOH A 115 423 423 HOH HOH . 
D 4 HOH A 116 424 424 HOH HOH . 
D 4 HOH A 117 425 425 HOH HOH . 
D 4 HOH A 118 426 426 HOH HOH . 
D 4 HOH A 119 427 427 HOH HOH . 
D 4 HOH A 120 428 428 HOH HOH . 
D 4 HOH A 121 429 429 HOH HOH . 
D 4 HOH A 122 430 430 HOH HOH . 
D 4 HOH A 123 431 431 HOH HOH . 
D 4 HOH A 124 432 432 HOH HOH . 
D 4 HOH A 125 433 433 HOH HOH . 
D 4 HOH A 126 434 434 HOH HOH . 
D 4 HOH A 127 435 435 HOH HOH . 
D 4 HOH A 128 436 436 HOH HOH . 
D 4 HOH A 129 437 437 HOH HOH . 
D 4 HOH A 130 438 438 HOH HOH . 
D 4 HOH A 131 439 439 HOH HOH . 
D 4 HOH A 132 440 440 HOH HOH . 
D 4 HOH A 133 441 441 HOH HOH . 
D 4 HOH A 134 442 442 HOH HOH . 
D 4 HOH A 135 443 443 HOH HOH . 
D 4 HOH A 136 444 444 HOH HOH . 
D 4 HOH A 137 445 445 HOH HOH . 
D 4 HOH A 138 446 446 HOH HOH . 
D 4 HOH A 139 447 447 HOH HOH . 
D 4 HOH A 140 448 448 HOH HOH . 
D 4 HOH A 141 449 449 HOH HOH . 
D 4 HOH A 142 450 450 HOH HOH . 
D 4 HOH A 143 451 451 HOH HOH . 
D 4 HOH A 144 452 452 HOH HOH . 
D 4 HOH A 145 453 453 HOH HOH . 
D 4 HOH A 146 454 454 HOH HOH . 
D 4 HOH A 147 455 455 HOH HOH . 
D 4 HOH A 148 456 456 HOH HOH . 
D 4 HOH A 149 457 457 HOH HOH . 
D 4 HOH A 150 458 458 HOH HOH . 
D 4 HOH A 151 459 459 HOH HOH . 
D 4 HOH A 152 460 460 HOH HOH . 
D 4 HOH A 153 461 461 HOH HOH . 
D 4 HOH A 154 462 462 HOH HOH . 
D 4 HOH A 155 463 463 HOH HOH . 
D 4 HOH A 156 464 464 HOH HOH . 
D 4 HOH A 157 465 465 HOH HOH . 
D 4 HOH A 158 466 466 HOH HOH . 
D 4 HOH A 159 467 467 HOH HOH . 
D 4 HOH A 160 468 468 HOH HOH . 
D 4 HOH A 161 469 469 HOH HOH . 
D 4 HOH A 162 470 470 HOH HOH . 
D 4 HOH A 163 471 471 HOH HOH . 
D 4 HOH A 164 472 472 HOH HOH . 
D 4 HOH A 165 473 473 HOH HOH . 
D 4 HOH A 166 474 474 HOH HOH . 
D 4 HOH A 167 475 475 HOH HOH . 
D 4 HOH A 168 476 476 HOH HOH . 
D 4 HOH A 169 477 477 HOH HOH . 
D 4 HOH A 170 478 478 HOH HOH . 
D 4 HOH A 171 479 479 HOH HOH . 
D 4 HOH A 172 480 480 HOH HOH . 
D 4 HOH A 173 481 481 HOH HOH . 
D 4 HOH A 174 482 482 HOH HOH . 
D 4 HOH A 175 483 483 HOH HOH . 
D 4 HOH A 176 484 484 HOH HOH . 
D 4 HOH A 177 485 485 HOH HOH . 
D 4 HOH A 178 486 486 HOH HOH . 
D 4 HOH A 179 487 487 HOH HOH . 
D 4 HOH A 180 488 488 HOH HOH . 
D 4 HOH A 181 489 489 HOH HOH . 
D 4 HOH A 182 490 490 HOH HOH . 
D 4 HOH A 183 491 491 HOH HOH . 
D 4 HOH A 184 492 492 HOH HOH . 
D 4 HOH A 185 493 493 HOH HOH . 
D 4 HOH A 186 494 494 HOH HOH . 
D 4 HOH A 187 495 495 HOH HOH . 
D 4 HOH A 188 496 496 HOH HOH . 
D 4 HOH A 189 497 497 HOH HOH . 
D 4 HOH A 190 498 498 HOH HOH . 
D 4 HOH A 191 499 499 HOH HOH . 
D 4 HOH A 192 500 500 HOH HOH . 
D 4 HOH A 193 501 501 HOH HOH . 
D 4 HOH A 194 502 502 HOH HOH . 
D 4 HOH A 195 503 503 HOH HOH . 
D 4 HOH A 196 504 504 HOH HOH . 
D 4 HOH A 197 505 505 HOH HOH . 
D 4 HOH A 198 506 506 HOH HOH . 
D 4 HOH A 199 507 507 HOH HOH . 
D 4 HOH A 200 508 508 HOH HOH . 
D 4 HOH A 201 509 509 HOH HOH . 
D 4 HOH A 202 510 510 HOH HOH . 
D 4 HOH A 203 511 511 HOH HOH . 
D 4 HOH A 204 512 512 HOH HOH . 
D 4 HOH A 205 513 513 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 ARB . B . C 3 14.357 56.989 55.217 0.5 6.66 ? C1 ARB 308 A 1 
HETATM 2 C C2 ARB . B . C 3 12.945 57.299 54.858 0.5 8.92 ? C2 ARB 308 A 1 
HETATM 3 C C3 ARB . B . C 3 12.418 56.421 53.813 0.5 7.31 ? C3 ARB 308 A 1 
HETATM 4 C C4 ARB . B . C 3 13.334 56.515 52.55 0.5 6.63 ? C4 ARB 308 A 1 
HETATM 5 C C5 ARB . B . C 3 14.807 56.069 52.893 0.5 7.21 ? C5 ARB 308 A 1 
HETATM 6 O O1 ARB . B . C 3 14.423 55.788 55.895 0.5 10.84 ? O1 ARB 308 A 1 
HETATM 7 O O2 ARB . B . C 3 12.101 56.997 56.028 0.5 8.14 ? O2 ARB 308 A 1 
HETATM 8 O O3 ARB . B . C 3 11.051 56.723 53.408 0.5 6.1 ? O3 ARB 308 A 1 
HETATM 9 O O4 ARB . B . C 3 13.323 57.86 51.926 0.5 9.43 ? O4 ARB 308 A 1 
HETATM 10 O O5 ARB . B . C 3 15.218 56.81 54.055 0.5 9.35 ? O5 ARB 308 A 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           10 
#