data_6AC0 # _model_server_result.job_id iiVeGAu4GmDlJMeTaxU8zQ _model_server_result.datetime_utc '2024-11-04 20:37:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ac0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6AC0 # _exptl.entry_id 6AC0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6AC0 _cell.length_a 28.6 _cell.length_b 28.6 _cell.length_c 264.72 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AC0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NH2 _struct_conn.ptnr1_label_comp_id ARG _struct_conn.ptnr1_label_seq_id 41 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ARG _struct_conn.ptnr1_auth_seq_id 235 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C1 _struct_conn.ptnr2_label_comp_id NAG _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NAG _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.442 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 176 n n C1 O1 NAG sing 177 n n C1 O5 NAG sing 178 n n C1 H1 NAG sing 179 n n C2 C3 NAG sing 180 n n C2 N2 NAG sing 181 n n C2 H2 NAG sing 182 n n C3 C4 NAG sing 183 n n C3 O3 NAG sing 184 n n C3 H3 NAG sing 185 n n C4 C5 NAG sing 186 n n C4 O4 NAG sing 187 n n C4 H4 NAG sing 188 n n C5 C6 NAG sing 189 n n C5 O5 NAG sing 190 n n C5 H5 NAG sing 191 n n C6 O6 NAG sing 192 n n C6 H61 NAG sing 193 n n C6 H62 NAG sing 194 n n C7 C8 NAG sing 195 n n C7 N2 NAG sing 196 n n C7 O7 NAG doub 197 n n C8 H81 NAG sing 198 n n C8 H82 NAG sing 199 n n C8 H83 NAG sing 200 n n N2 HN2 NAG sing 201 n n O1 HO1 NAG sing 202 n n O3 HO3 NAG sing 203 n n O4 HO4 NAG sing 204 n n O6 HO6 NAG sing 205 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 6AC0 _atom_sites.fract_transf_matrix[1][1] 0.034965 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.034965 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003778 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG A 1 401 1 NAG NAG . C 3 HOH A 1 501 123 HOH HOH . C 3 HOH A 2 502 40 HOH HOH . C 3 HOH A 3 503 111 HOH HOH . C 3 HOH A 4 504 76 HOH HOH . C 3 HOH A 5 505 75 HOH HOH . C 3 HOH A 6 506 94 HOH HOH . C 3 HOH A 7 507 103 HOH HOH . C 3 HOH A 8 508 50 HOH HOH . C 3 HOH A 9 509 25 HOH HOH . C 3 HOH A 10 510 60 HOH HOH . C 3 HOH A 11 511 73 HOH HOH . C 3 HOH A 12 512 24 HOH HOH . C 3 HOH A 13 513 68 HOH HOH . C 3 HOH A 14 514 6 HOH HOH . C 3 HOH A 15 515 15 HOH HOH . C 3 HOH A 16 516 43 HOH HOH . C 3 HOH A 17 517 9 HOH HOH . C 3 HOH A 18 518 36 HOH HOH . C 3 HOH A 19 519 124 HOH HOH . C 3 HOH A 20 520 27 HOH HOH . C 3 HOH A 21 521 14 HOH HOH . C 3 HOH A 22 522 29 HOH HOH . C 3 HOH A 23 523 66 HOH HOH . C 3 HOH A 24 524 21 HOH HOH . C 3 HOH A 25 525 83 HOH HOH . C 3 HOH A 26 526 10 HOH HOH . C 3 HOH A 27 527 49 HOH HOH . C 3 HOH A 28 528 46 HOH HOH . C 3 HOH A 29 529 19 HOH HOH . C 3 HOH A 30 530 7 HOH HOH . C 3 HOH A 31 531 4 HOH HOH . C 3 HOH A 32 532 35 HOH HOH . C 3 HOH A 33 533 34 HOH HOH . C 3 HOH A 34 534 93 HOH HOH . C 3 HOH A 35 535 17 HOH HOH . C 3 HOH A 36 536 64 HOH HOH . C 3 HOH A 37 537 8 HOH HOH . C 3 HOH A 38 538 3 HOH HOH . C 3 HOH A 39 539 2 HOH HOH . C 3 HOH A 40 540 32 HOH HOH . C 3 HOH A 41 541 20 HOH HOH . C 3 HOH A 42 542 11 HOH HOH . C 3 HOH A 43 543 1 HOH HOH . C 3 HOH A 44 544 12 HOH HOH . C 3 HOH A 45 545 30 HOH HOH . C 3 HOH A 46 546 104 HOH HOH . C 3 HOH A 47 547 101 HOH HOH . C 3 HOH A 48 548 63 HOH HOH . C 3 HOH A 49 549 57 HOH HOH . C 3 HOH A 50 550 56 HOH HOH . C 3 HOH A 51 551 122 HOH HOH . C 3 HOH A 52 552 45 HOH HOH . C 3 HOH A 53 553 48 HOH HOH . C 3 HOH A 54 554 37 HOH HOH . C 3 HOH A 55 555 79 HOH HOH . C 3 HOH A 56 556 26 HOH HOH . C 3 HOH A 57 557 72 HOH HOH . C 3 HOH A 58 558 42 HOH HOH . C 3 HOH A 59 559 28 HOH HOH . C 3 HOH A 60 560 13 HOH HOH . C 3 HOH A 61 561 39 HOH HOH . C 3 HOH A 62 562 38 HOH HOH . C 3 HOH A 63 563 112 HOH HOH . C 3 HOH A 64 564 100 HOH HOH . C 3 HOH A 65 565 110 HOH HOH . C 3 HOH A 66 566 62 HOH HOH . C 3 HOH A 67 567 5 HOH HOH . C 3 HOH A 68 568 41 HOH HOH . C 3 HOH A 69 569 16 HOH HOH . C 3 HOH A 70 570 18 HOH HOH . C 3 HOH A 71 571 106 HOH HOH . C 3 HOH A 72 572 99 HOH HOH . C 3 HOH A 73 573 33 HOH HOH . C 3 HOH A 74 574 22 HOH HOH . C 3 HOH A 75 575 120 HOH HOH . C 3 HOH A 76 576 105 HOH HOH . C 3 HOH A 77 577 119 HOH HOH . C 3 HOH A 78 578 87 HOH HOH . C 3 HOH A 79 579 85 HOH HOH . C 3 HOH A 80 580 95 HOH HOH . C 3 HOH A 81 581 52 HOH HOH . C 3 HOH A 82 582 58 HOH HOH . C 3 HOH A 83 583 81 HOH HOH . C 3 HOH A 84 584 84 HOH HOH . C 3 HOH A 85 585 118 HOH HOH . C 3 HOH A 86 586 61 HOH HOH . C 3 HOH A 87 587 74 HOH HOH . C 3 HOH A 88 588 89 HOH HOH . C 3 HOH A 89 589 31 HOH HOH . C 3 HOH A 90 590 69 HOH HOH . C 3 HOH A 91 591 23 HOH HOH . C 3 HOH A 92 592 80 HOH HOH . C 3 HOH A 93 593 65 HOH HOH . C 3 HOH A 94 594 82 HOH HOH . C 3 HOH A 95 595 77 HOH HOH . C 3 HOH A 96 596 53 HOH HOH . C 3 HOH A 97 597 90 HOH HOH . C 3 HOH A 98 598 54 HOH HOH . C 3 HOH A 99 599 67 HOH HOH . C 3 HOH A 100 600 113 HOH HOH . C 3 HOH A 101 601 98 HOH HOH . C 3 HOH A 102 602 71 HOH HOH . C 3 HOH A 103 603 44 HOH HOH . C 3 HOH A 104 604 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . B 2 16.131 25.456 -30.187 1 36.03 ? C1 NAG 401 A 1 HETATM 2 C C2 NAG . . . B 2 15.967 24.744 -31.535 1 35.99 ? C2 NAG 401 A 1 HETATM 3 C C3 NAG . . . B 2 16.789 25.452 -32.609 1 39.69 ? C3 NAG 401 A 1 HETATM 4 C C4 NAG . . . B 2 16.418 26.927 -32.676 1 41.02 ? C4 NAG 401 A 1 HETATM 5 C C5 NAG . . . B 2 16.596 27.563 -31.301 1 40.51 ? C5 NAG 401 A 1 HETATM 6 C C6 NAG . . . B 2 16.149 29.005 -31.255 1 42.42 ? C6 NAG 401 A 1 HETATM 7 C C7 NAG . . . B 2 15.475 22.336 -31.473 1 36.74 ? C7 NAG 401 A 1 HETATM 8 C C8 NAG . . . B 2 14.033 22.723 -31.6 1 36.62 ? C8 NAG 401 A 1 HETATM 9 N N2 NAG . . . B 2 16.353 23.345 -31.443 1 36.48 ? N2 NAG 401 A 1 HETATM 10 O O3 NAG . . . B 2 16.58 24.83 -33.872 1 40.23 ? O3 NAG 401 A 1 HETATM 11 O O4 NAG . . . B 2 17.25 27.591 -33.623 1 42.42 ? O4 NAG 401 A 1 HETATM 12 O O5 NAG . . . B 2 15.803 26.858 -30.333 1 37.28 ? O5 NAG 401 A 1 HETATM 13 O O6 NAG . . . B 2 14.809 29.138 -31.709 1 43.88 ? O6 NAG 401 A 1 HETATM 14 O O7 NAG . . . B 2 15.831 21.161 -31.405 1 40.06 ? O7 NAG 401 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #