data_6ADY # _model_server_result.job_id ZBfCIxHbFEPPYhpzOK7I6Q _model_server_result.datetime_utc '2024-11-15 11:30:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ady # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":702}' # _entry.id 6ADY # _exptl.entry_id 6ADY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.95 _cell.angle_gamma 90 _cell.entry_id 6ADY _cell.length_a 53.681 _cell.length_b 68.376 _cell.length_c 56.717 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ADY _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 32 A THR 201 1_555 C MN MN . A MN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc2 A OE2 GLU 117 A GLU 286 1_555 C MN MN . A MN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc3 B O1B ADP . A ADP 701 1_555 C MN MN . A MN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc4 C MN MN . A MN 702 1_555 D O HOH . A HOH 818 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc5 C MN MN . A MN 702 1_555 D O HOH . A HOH 851 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc6 C MN MN . A MN 702 1_555 D O HOH . A HOH 890 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6ADY _atom_sites.fract_transf_matrix[1][1] 0.018629 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000961 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014625 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017655 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 701 1 ADP ADP . C 3 MN A 1 702 1 MN MN . D 4 HOH A 1 801 125 HOH HOH . D 4 HOH A 2 802 19 HOH HOH . D 4 HOH A 3 803 43 HOH HOH . D 4 HOH A 4 804 2 HOH HOH . D 4 HOH A 5 805 61 HOH HOH . D 4 HOH A 6 806 257 HOH HOH . D 4 HOH A 7 807 235 HOH HOH . D 4 HOH A 8 808 7 HOH HOH . D 4 HOH A 9 809 94 HOH HOH . D 4 HOH A 10 810 40 HOH HOH . D 4 HOH A 11 811 166 HOH HOH . D 4 HOH A 12 812 101 HOH HOH . D 4 HOH A 13 813 115 HOH HOH . D 4 HOH A 14 814 26 HOH HOH . D 4 HOH A 15 815 265 HOH HOH . D 4 HOH A 16 816 60 HOH HOH . D 4 HOH A 17 817 76 HOH HOH . D 4 HOH A 18 818 90 HOH HOH . D 4 HOH A 19 819 199 HOH HOH . D 4 HOH A 20 820 161 HOH HOH . D 4 HOH A 21 821 25 HOH HOH . D 4 HOH A 22 822 280 HOH HOH . D 4 HOH A 23 823 168 HOH HOH . D 4 HOH A 24 824 262 HOH HOH . D 4 HOH A 25 825 158 HOH HOH . D 4 HOH A 26 826 267 HOH HOH . D 4 HOH A 27 827 211 HOH HOH . D 4 HOH A 28 828 147 HOH HOH . D 4 HOH A 29 829 79 HOH HOH . D 4 HOH A 30 830 58 HOH HOH . D 4 HOH A 31 831 54 HOH HOH . D 4 HOH A 32 832 236 HOH HOH . D 4 HOH A 33 833 109 HOH HOH . D 4 HOH A 34 834 193 HOH HOH . D 4 HOH A 35 835 227 HOH HOH . D 4 HOH A 36 836 292 HOH HOH . D 4 HOH A 37 837 270 HOH HOH . D 4 HOH A 38 838 137 HOH HOH . D 4 HOH A 39 839 179 HOH HOH . D 4 HOH A 40 840 216 HOH HOH . D 4 HOH A 41 841 20 HOH HOH . D 4 HOH A 42 842 42 HOH HOH . D 4 HOH A 43 843 238 HOH HOH . D 4 HOH A 44 844 73 HOH HOH . D 4 HOH A 45 845 27 HOH HOH . D 4 HOH A 46 846 188 HOH HOH . D 4 HOH A 47 847 142 HOH HOH . D 4 HOH A 48 848 251 HOH HOH . D 4 HOH A 49 849 12 HOH HOH . D 4 HOH A 50 850 105 HOH HOH . D 4 HOH A 51 851 18 HOH HOH . D 4 HOH A 52 852 213 HOH HOH . D 4 HOH A 53 853 201 HOH HOH . D 4 HOH A 54 854 163 HOH HOH . D 4 HOH A 55 855 214 HOH HOH . D 4 HOH A 56 856 17 HOH HOH . D 4 HOH A 57 857 207 HOH HOH . D 4 HOH A 58 858 186 HOH HOH . D 4 HOH A 59 859 32 HOH HOH . D 4 HOH A 60 860 53 HOH HOH . D 4 HOH A 61 861 177 HOH HOH . D 4 HOH A 62 862 282 HOH HOH . D 4 HOH A 63 863 266 HOH HOH . D 4 HOH A 64 864 68 HOH HOH . D 4 HOH A 65 865 146 HOH HOH . D 4 HOH A 66 866 77 HOH HOH . D 4 HOH A 67 867 145 HOH HOH . D 4 HOH A 68 868 47 HOH HOH . D 4 HOH A 69 869 64 HOH HOH . D 4 HOH A 70 870 276 HOH HOH . D 4 HOH A 71 871 16 HOH HOH . D 4 HOH A 72 872 192 HOH HOH . D 4 HOH A 73 873 195 HOH HOH . D 4 HOH A 74 874 150 HOH HOH . D 4 HOH A 75 875 134 HOH HOH . D 4 HOH A 76 876 130 HOH HOH . D 4 HOH A 77 877 14 HOH HOH . D 4 HOH A 78 878 4 HOH HOH . D 4 HOH A 79 879 223 HOH HOH . D 4 HOH A 80 880 116 HOH HOH . D 4 HOH A 81 881 81 HOH HOH . D 4 HOH A 82 882 92 HOH HOH . D 4 HOH A 83 883 56 HOH HOH . D 4 HOH A 84 884 104 HOH HOH . D 4 HOH A 85 885 210 HOH HOH . D 4 HOH A 86 886 133 HOH HOH . D 4 HOH A 87 887 205 HOH HOH . D 4 HOH A 88 888 13 HOH HOH . D 4 HOH A 89 889 107 HOH HOH . D 4 HOH A 90 890 63 HOH HOH . D 4 HOH A 91 891 121 HOH HOH . D 4 HOH A 92 892 152 HOH HOH . D 4 HOH A 93 893 117 HOH HOH . D 4 HOH A 94 894 78 HOH HOH . D 4 HOH A 95 895 128 HOH HOH . D 4 HOH A 96 896 119 HOH HOH . D 4 HOH A 97 897 30 HOH HOH . D 4 HOH A 98 898 22 HOH HOH . D 4 HOH A 99 899 50 HOH HOH . D 4 HOH A 100 900 71 HOH HOH . D 4 HOH A 101 901 176 HOH HOH . D 4 HOH A 102 902 62 HOH HOH . D 4 HOH A 103 903 10 HOH HOH . D 4 HOH A 104 904 269 HOH HOH . D 4 HOH A 105 905 33 HOH HOH . D 4 HOH A 106 906 254 HOH HOH . D 4 HOH A 107 907 57 HOH HOH . D 4 HOH A 108 908 75 HOH HOH . D 4 HOH A 109 909 106 HOH HOH . D 4 HOH A 110 910 124 HOH HOH . D 4 HOH A 111 911 203 HOH HOH . D 4 HOH A 112 912 36 HOH HOH . D 4 HOH A 113 913 8 HOH HOH . D 4 HOH A 114 914 231 HOH HOH . D 4 HOH A 115 915 187 HOH HOH . D 4 HOH A 116 916 41 HOH HOH . D 4 HOH A 117 917 243 HOH HOH . D 4 HOH A 118 918 159 HOH HOH . D 4 HOH A 119 919 46 HOH HOH . D 4 HOH A 120 920 24 HOH HOH . D 4 HOH A 121 921 45 HOH HOH . D 4 HOH A 122 922 6 HOH HOH . D 4 HOH A 123 923 120 HOH HOH . D 4 HOH A 124 924 5 HOH HOH . D 4 HOH A 125 925 1 HOH HOH . D 4 HOH A 126 926 91 HOH HOH . D 4 HOH A 127 927 209 HOH HOH . D 4 HOH A 128 928 29 HOH HOH . D 4 HOH A 129 929 191 HOH HOH . D 4 HOH A 130 930 138 HOH HOH . D 4 HOH A 131 931 217 HOH HOH . D 4 HOH A 132 932 245 HOH HOH . D 4 HOH A 133 933 139 HOH HOH . D 4 HOH A 134 934 148 HOH HOH . D 4 HOH A 135 935 112 HOH HOH . D 4 HOH A 136 936 110 HOH HOH . D 4 HOH A 137 937 275 HOH HOH . D 4 HOH A 138 938 89 HOH HOH . D 4 HOH A 139 939 52 HOH HOH . D 4 HOH A 140 940 239 HOH HOH . D 4 HOH A 141 941 122 HOH HOH . D 4 HOH A 142 942 3 HOH HOH . D 4 HOH A 143 943 256 HOH HOH . D 4 HOH A 144 944 9 HOH HOH . D 4 HOH A 145 945 86 HOH HOH . D 4 HOH A 146 946 170 HOH HOH . D 4 HOH A 147 947 55 HOH HOH . D 4 HOH A 148 948 271 HOH HOH . D 4 HOH A 149 949 151 HOH HOH . D 4 HOH A 150 950 212 HOH HOH . D 4 HOH A 151 951 174 HOH HOH . D 4 HOH A 152 952 277 HOH HOH . D 4 HOH A 153 953 111 HOH HOH . D 4 HOH A 154 954 206 HOH HOH . D 4 HOH A 155 955 204 HOH HOH . D 4 HOH A 156 956 11 HOH HOH . D 4 HOH A 157 957 96 HOH HOH . D 4 HOH A 158 958 287 HOH HOH . D 4 HOH A 159 959 232 HOH HOH . D 4 HOH A 160 960 23 HOH HOH . D 4 HOH A 161 961 202 HOH HOH . D 4 HOH A 162 962 108 HOH HOH . D 4 HOH A 163 963 31 HOH HOH . D 4 HOH A 164 964 259 HOH HOH . D 4 HOH A 165 965 200 HOH HOH . D 4 HOH A 166 966 162 HOH HOH . D 4 HOH A 167 967 263 HOH HOH . D 4 HOH A 168 968 284 HOH HOH . D 4 HOH A 169 969 67 HOH HOH . D 4 HOH A 170 970 37 HOH HOH . D 4 HOH A 171 971 194 HOH HOH . D 4 HOH A 172 972 72 HOH HOH . D 4 HOH A 173 973 157 HOH HOH . D 4 HOH A 174 974 88 HOH HOH . D 4 HOH A 175 975 219 HOH HOH . D 4 HOH A 176 976 182 HOH HOH . D 4 HOH A 177 977 164 HOH HOH . D 4 HOH A 178 978 98 HOH HOH . D 4 HOH A 179 979 113 HOH HOH . D 4 HOH A 180 980 165 HOH HOH . D 4 HOH A 181 981 129 HOH HOH . D 4 HOH A 182 982 225 HOH HOH . D 4 HOH A 183 983 247 HOH HOH . D 4 HOH A 184 984 100 HOH HOH . D 4 HOH A 185 985 140 HOH HOH . D 4 HOH A 186 986 49 HOH HOH . D 4 HOH A 187 987 103 HOH HOH . D 4 HOH A 188 988 228 HOH HOH . D 4 HOH A 189 989 51 HOH HOH . D 4 HOH A 190 990 285 HOH HOH . D 4 HOH A 191 991 264 HOH HOH . D 4 HOH A 192 992 97 HOH HOH . D 4 HOH A 193 993 171 HOH HOH . D 4 HOH A 194 994 74 HOH HOH . D 4 HOH A 195 995 255 HOH HOH . D 4 HOH A 196 996 274 HOH HOH . D 4 HOH A 197 997 127 HOH HOH . D 4 HOH A 198 998 289 HOH HOH . D 4 HOH A 199 999 234 HOH HOH . D 4 HOH A 200 1000 70 HOH HOH . D 4 HOH A 201 1001 197 HOH HOH . D 4 HOH A 202 1002 123 HOH HOH . D 4 HOH A 203 1003 155 HOH HOH . D 4 HOH A 204 1004 93 HOH HOH . D 4 HOH A 205 1005 181 HOH HOH . D 4 HOH A 206 1006 131 HOH HOH . D 4 HOH A 207 1007 196 HOH HOH . D 4 HOH A 208 1008 293 HOH HOH . D 4 HOH A 209 1009 279 HOH HOH . D 4 HOH A 210 1010 218 HOH HOH . D 4 HOH A 211 1011 15 HOH HOH . D 4 HOH A 212 1012 224 HOH HOH . D 4 HOH A 213 1013 44 HOH HOH . D 4 HOH A 214 1014 273 HOH HOH . D 4 HOH A 215 1015 248 HOH HOH . D 4 HOH A 216 1016 48 HOH HOH . D 4 HOH A 217 1017 240 HOH HOH . D 4 HOH A 218 1018 80 HOH HOH . D 4 HOH A 219 1019 260 HOH HOH . D 4 HOH A 220 1020 118 HOH HOH . D 4 HOH A 221 1021 291 HOH HOH . D 4 HOH A 222 1022 69 HOH HOH . D 4 HOH A 223 1023 156 HOH HOH . D 4 HOH A 224 1024 184 HOH HOH . D 4 HOH A 225 1025 144 HOH HOH . D 4 HOH A 226 1026 283 HOH HOH . D 4 HOH A 227 1027 99 HOH HOH . D 4 HOH A 228 1028 220 HOH HOH . D 4 HOH A 229 1029 87 HOH HOH . D 4 HOH A 230 1030 233 HOH HOH . D 4 HOH A 231 1031 261 HOH HOH . D 4 HOH A 232 1032 141 HOH HOH . D 4 HOH A 233 1033 38 HOH HOH . D 4 HOH A 234 1034 66 HOH HOH . D 4 HOH A 235 1035 154 HOH HOH . D 4 HOH A 236 1036 230 HOH HOH . D 4 HOH A 237 1037 268 HOH HOH . D 4 HOH A 238 1038 82 HOH HOH . D 4 HOH A 239 1039 189 HOH HOH . D 4 HOH A 240 1040 84 HOH HOH . D 4 HOH A 241 1041 252 HOH HOH . D 4 HOH A 242 1042 242 HOH HOH . D 4 HOH A 243 1043 167 HOH HOH . D 4 HOH A 244 1044 169 HOH HOH . D 4 HOH A 245 1045 246 HOH HOH . D 4 HOH A 246 1046 288 HOH HOH . D 4 HOH A 247 1047 258 HOH HOH . D 4 HOH A 248 1048 95 HOH HOH . D 4 HOH A 249 1049 294 HOH HOH . D 4 HOH A 250 1050 126 HOH HOH . D 4 HOH A 251 1051 208 HOH HOH . D 4 HOH A 252 1052 135 HOH HOH . D 4 HOH A 253 1053 34 HOH HOH . D 4 HOH A 254 1054 198 HOH HOH . D 4 HOH A 255 1055 175 HOH HOH . D 4 HOH A 256 1056 249 HOH HOH . D 4 HOH A 257 1057 136 HOH HOH . D 4 HOH A 258 1058 253 HOH HOH . D 4 HOH A 259 1059 281 HOH HOH . D 4 HOH A 260 1060 241 HOH HOH . D 4 HOH A 261 1061 183 HOH HOH . D 4 HOH A 262 1062 21 HOH HOH . D 4 HOH A 263 1063 132 HOH HOH . D 4 HOH A 264 1064 172 HOH HOH . D 4 HOH A 265 1065 215 HOH HOH . D 4 HOH A 266 1066 173 HOH HOH . D 4 HOH A 267 1067 153 HOH HOH . D 4 HOH A 268 1068 272 HOH HOH . D 4 HOH A 269 1069 65 HOH HOH . D 4 HOH A 270 1070 250 HOH HOH . D 4 HOH A 271 1071 143 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -4.246 _atom_site.Cartn_y 18.937 _atom_site.Cartn_z -8.498 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.61 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 702 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #