data_6AF7 # _model_server_result.job_id ZaQSWQ4LDjB7d96iIgkWkQ _model_server_result.datetime_utc '2024-11-24 06:22:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6af7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6AF7 # _exptl.entry_id 6AF7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6AF7 _cell.length_a 74.75 _cell.length_b 74.75 _cell.length_c 75.42 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AF7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_554 -x,-x+y,-z-2/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -50.28 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 6AF7 _atom_sites.fract_transf_matrix[1][1] 0.013378 _atom_sites.fract_transf_matrix[1][2] 0.007724 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015448 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013259 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1PE A 1 201 201 1PE 1PE . C 3 CL A 1 202 202 CL CL . D 4 HOH A 1 301 301 HOH HOH . D 4 HOH A 2 302 302 HOH HOH . D 4 HOH A 3 303 303 HOH HOH . D 4 HOH A 4 304 304 HOH HOH . D 4 HOH A 5 305 305 HOH HOH . D 4 HOH A 6 306 306 HOH HOH . D 4 HOH A 7 307 308 HOH HOH . D 4 HOH A 8 308 309 HOH HOH . D 4 HOH A 9 309 310 HOH HOH . D 4 HOH A 10 310 311 HOH HOH . D 4 HOH A 11 311 312 HOH HOH . D 4 HOH A 12 312 313 HOH HOH . D 4 HOH A 13 313 314 HOH HOH . D 4 HOH A 14 314 315 HOH HOH . D 4 HOH A 15 315 316 HOH HOH . D 4 HOH A 16 316 317 HOH HOH . D 4 HOH A 17 317 318 HOH HOH . D 4 HOH A 18 318 319 HOH HOH . D 4 HOH A 19 319 320 HOH HOH . D 4 HOH A 20 320 321 HOH HOH . D 4 HOH A 21 321 322 HOH HOH . D 4 HOH A 22 322 323 HOH HOH . D 4 HOH A 23 323 324 HOH HOH . D 4 HOH A 24 324 325 HOH HOH . D 4 HOH A 25 325 326 HOH HOH . D 4 HOH A 26 326 327 HOH HOH . D 4 HOH A 27 327 328 HOH HOH . D 4 HOH A 28 328 329 HOH HOH . D 4 HOH A 29 329 330 HOH HOH . D 4 HOH A 30 330 331 HOH HOH . D 4 HOH A 31 331 332 HOH HOH . D 4 HOH A 32 332 333 HOH HOH . D 4 HOH A 33 333 334 HOH HOH . D 4 HOH A 34 334 335 HOH HOH . D 4 HOH A 35 335 336 HOH HOH . D 4 HOH A 36 336 337 HOH HOH . D 4 HOH A 37 337 338 HOH HOH . D 4 HOH A 38 338 339 HOH HOH . D 4 HOH A 39 339 340 HOH HOH . D 4 HOH A 40 340 341 HOH HOH . D 4 HOH A 41 341 342 HOH HOH . D 4 HOH A 42 342 343 HOH HOH . D 4 HOH A 43 343 344 HOH HOH . D 4 HOH A 44 344 345 HOH HOH . D 4 HOH A 45 345 346 HOH HOH . D 4 HOH A 46 346 347 HOH HOH . D 4 HOH A 47 347 348 HOH HOH . D 4 HOH A 48 348 349 HOH HOH . D 4 HOH A 49 349 350 HOH HOH . D 4 HOH A 50 350 351 HOH HOH . D 4 HOH A 51 351 352 HOH HOH . D 4 HOH A 52 352 353 HOH HOH . D 4 HOH A 53 353 354 HOH HOH . D 4 HOH A 54 354 355 HOH HOH . D 4 HOH A 55 355 356 HOH HOH . D 4 HOH A 56 356 357 HOH HOH . D 4 HOH A 57 357 358 HOH HOH . D 4 HOH A 58 358 359 HOH HOH . D 4 HOH A 59 359 360 HOH HOH . D 4 HOH A 60 360 361 HOH HOH . D 4 HOH A 61 361 362 HOH HOH . D 4 HOH A 62 362 363 HOH HOH . D 4 HOH A 63 363 364 HOH HOH . D 4 HOH A 64 364 365 HOH HOH . D 4 HOH A 65 365 366 HOH HOH . D 4 HOH A 66 366 367 HOH HOH . D 4 HOH A 67 367 368 HOH HOH . D 4 HOH A 68 368 369 HOH HOH . D 4 HOH A 69 369 370 HOH HOH . D 4 HOH A 70 370 371 HOH HOH . D 4 HOH A 71 371 372 HOH HOH . D 4 HOH A 72 372 373 HOH HOH . D 4 HOH A 73 373 374 HOH HOH . D 4 HOH A 74 374 375 HOH HOH . D 4 HOH A 75 375 376 HOH HOH . D 4 HOH A 76 376 377 HOH HOH . D 4 HOH A 77 377 378 HOH HOH . D 4 HOH A 78 378 379 HOH HOH . D 4 HOH A 79 379 380 HOH HOH . D 4 HOH A 80 380 381 HOH HOH . D 4 HOH A 81 381 382 HOH HOH . D 4 HOH A 82 382 383 HOH HOH . D 4 HOH A 83 383 384 HOH HOH . D 4 HOH A 84 384 385 HOH HOH . D 4 HOH A 85 385 386 HOH HOH . D 4 HOH A 86 386 387 HOH HOH . D 4 HOH A 87 387 388 HOH HOH . D 4 HOH A 88 388 389 HOH HOH . D 4 HOH A 89 389 390 HOH HOH . D 4 HOH A 90 390 391 HOH HOH . D 4 HOH A 91 391 392 HOH HOH . D 4 HOH A 92 392 393 HOH HOH . D 4 HOH A 93 393 394 HOH HOH . D 4 HOH A 94 394 395 HOH HOH . D 4 HOH A 95 395 396 HOH HOH . D 4 HOH A 96 396 397 HOH HOH . D 4 HOH A 97 397 398 HOH HOH . D 4 HOH A 98 398 399 HOH HOH . D 4 HOH A 99 399 400 HOH HOH . D 4 HOH A 100 400 401 HOH HOH . D 4 HOH A 101 401 402 HOH HOH . D 4 HOH A 102 402 403 HOH HOH . D 4 HOH A 103 403 404 HOH HOH . D 4 HOH A 104 404 405 HOH HOH . D 4 HOH A 105 405 406 HOH HOH . D 4 HOH A 106 406 407 HOH HOH . D 4 HOH A 107 407 408 HOH HOH . D 4 HOH A 108 408 409 HOH HOH . D 4 HOH A 109 409 410 HOH HOH . D 4 HOH A 110 410 411 HOH HOH . D 4 HOH A 111 411 412 HOH HOH . D 4 HOH A 112 412 413 HOH HOH . D 4 HOH A 113 413 414 HOH HOH . D 4 HOH A 114 414 415 HOH HOH . D 4 HOH A 115 415 416 HOH HOH . D 4 HOH A 116 416 417 HOH HOH . D 4 HOH A 117 417 418 HOH HOH . D 4 HOH A 118 418 419 HOH HOH . D 4 HOH A 119 419 420 HOH HOH . D 4 HOH A 120 420 421 HOH HOH . D 4 HOH A 121 421 422 HOH HOH . D 4 HOH A 122 422 423 HOH HOH . D 4 HOH A 123 423 424 HOH HOH . D 4 HOH A 124 424 425 HOH HOH . D 4 HOH A 125 425 426 HOH HOH . D 4 HOH A 126 426 427 HOH HOH . D 4 HOH A 127 427 428 HOH HOH . D 4 HOH A 128 428 429 HOH HOH . D 4 HOH A 129 429 430 HOH HOH . D 4 HOH A 130 430 431 HOH HOH . D 4 HOH A 131 431 432 HOH HOH . D 4 HOH A 132 432 433 HOH HOH . D 4 HOH A 133 433 434 HOH HOH . D 4 HOH A 134 434 435 HOH HOH . D 4 HOH A 135 435 436 HOH HOH . D 4 HOH A 136 436 437 HOH HOH . D 4 HOH A 137 437 438 HOH HOH . D 4 HOH A 138 438 439 HOH HOH . D 4 HOH A 139 439 440 HOH HOH . D 4 HOH A 140 440 441 HOH HOH . D 4 HOH A 141 441 442 HOH HOH . D 4 HOH A 142 442 443 HOH HOH . D 4 HOH A 143 443 444 HOH HOH . D 4 HOH A 144 444 445 HOH HOH . D 4 HOH A 145 445 446 HOH HOH . D 4 HOH A 146 446 447 HOH HOH . D 4 HOH A 147 447 448 HOH HOH . D 4 HOH A 148 448 449 HOH HOH . D 4 HOH A 149 449 450 HOH HOH . D 4 HOH A 150 450 451 HOH HOH . D 4 HOH A 151 451 452 HOH HOH . D 4 HOH A 152 452 453 HOH HOH . D 4 HOH A 153 453 454 HOH HOH . D 4 HOH A 154 454 455 HOH HOH . D 4 HOH A 155 455 456 HOH HOH . D 4 HOH A 156 456 457 HOH HOH . D 4 HOH A 157 457 458 HOH HOH . D 4 HOH A 158 458 459 HOH HOH . D 4 HOH A 159 459 460 HOH HOH . D 4 HOH A 160 460 461 HOH HOH . D 4 HOH A 161 461 462 HOH HOH . D 4 HOH A 162 462 463 HOH HOH . D 4 HOH A 163 463 307 HOH HOH . D 4 HOH A 164 464 464 HOH HOH . D 4 HOH A 165 465 465 HOH HOH . D 4 HOH A 166 466 466 HOH HOH . D 4 HOH A 167 467 467 HOH HOH . D 4 HOH A 168 468 468 HOH HOH . D 4 HOH A 169 469 469 HOH HOH . D 4 HOH A 170 470 470 HOH HOH . D 4 HOH A 171 471 471 HOH HOH . D 4 HOH A 172 472 472 HOH HOH . D 4 HOH A 173 473 473 HOH HOH . D 4 HOH A 174 474 474 HOH HOH . D 4 HOH A 175 475 475 HOH HOH . D 4 HOH A 176 476 476 HOH HOH . D 4 HOH A 177 477 477 HOH HOH . D 4 HOH A 178 478 478 HOH HOH . D 4 HOH A 179 479 479 HOH HOH . D 4 HOH A 180 480 480 HOH HOH . D 4 HOH A 181 481 481 HOH HOH . D 4 HOH A 182 482 482 HOH HOH . D 4 HOH A 183 483 483 HOH HOH . D 4 HOH A 184 484 484 HOH HOH . D 4 HOH A 185 485 485 HOH HOH . D 4 HOH A 186 486 486 HOH HOH . D 4 HOH A 187 487 487 HOH HOH . D 4 HOH A 188 488 488 HOH HOH . D 4 HOH A 189 489 489 HOH HOH . D 4 HOH A 190 490 490 HOH HOH . D 4 HOH A 191 491 491 HOH HOH . D 4 HOH A 192 492 492 HOH HOH . D 4 HOH A 193 493 493 HOH HOH . D 4 HOH A 194 494 494 HOH HOH . D 4 HOH A 195 495 495 HOH HOH . D 4 HOH A 196 496 496 HOH HOH . D 4 HOH A 197 497 497 HOH HOH . D 4 HOH A 198 498 498 HOH HOH . D 4 HOH A 199 499 499 HOH HOH . D 4 HOH A 200 500 500 HOH HOH . D 4 HOH A 201 501 501 HOH HOH . D 4 HOH A 202 502 502 HOH HOH . D 4 HOH A 203 503 503 HOH HOH . D 4 HOH A 204 504 505 HOH HOH . D 4 HOH A 205 505 506 HOH HOH . D 4 HOH A 206 506 507 HOH HOH . D 4 HOH A 207 507 508 HOH HOH . D 4 HOH A 208 508 509 HOH HOH . D 4 HOH A 209 509 510 HOH HOH . D 4 HOH A 210 510 511 HOH HOH . D 4 HOH A 211 511 512 HOH HOH . D 4 HOH A 212 512 513 HOH HOH . D 4 HOH A 213 513 514 HOH HOH . D 4 HOH A 214 514 515 HOH HOH . D 4 HOH A 215 515 516 HOH HOH . D 4 HOH A 216 516 517 HOH HOH . D 4 HOH A 217 517 518 HOH HOH . D 4 HOH A 218 518 519 HOH HOH . D 4 HOH A 219 519 520 HOH HOH . D 4 HOH A 220 520 521 HOH HOH . D 4 HOH A 221 521 522 HOH HOH . D 4 HOH A 222 522 523 HOH HOH . D 4 HOH A 223 523 524 HOH HOH . D 4 HOH A 224 524 525 HOH HOH . D 4 HOH A 225 525 526 HOH HOH . D 4 HOH A 226 526 527 HOH HOH . D 4 HOH A 227 527 528 HOH HOH . D 4 HOH A 228 528 529 HOH HOH . D 4 HOH A 229 529 530 HOH HOH . D 4 HOH A 230 530 531 HOH HOH . D 4 HOH A 231 531 532 HOH HOH . D 4 HOH A 232 532 533 HOH HOH . D 4 HOH A 233 533 534 HOH HOH . D 4 HOH A 234 534 535 HOH HOH . D 4 HOH A 235 535 536 HOH HOH . D 4 HOH A 236 536 537 HOH HOH . D 4 HOH A 237 537 538 HOH HOH . D 4 HOH A 238 538 539 HOH HOH . D 4 HOH A 239 539 540 HOH HOH . D 4 HOH A 240 540 541 HOH HOH . D 4 HOH A 241 541 542 HOH HOH . D 4 HOH A 242 542 543 HOH HOH . D 4 HOH A 243 543 544 HOH HOH . D 4 HOH A 244 544 545 HOH HOH . D 4 HOH A 245 545 546 HOH HOH . D 4 HOH A 246 546 547 HOH HOH . D 4 HOH A 247 547 548 HOH HOH . D 4 HOH A 248 548 549 HOH HOH . D 4 HOH A 249 549 550 HOH HOH . D 4 HOH A 250 550 551 HOH HOH . D 4 HOH A 251 551 552 HOH HOH . D 4 HOH A 252 552 553 HOH HOH . D 4 HOH A 253 553 554 HOH HOH . D 4 HOH A 254 554 555 HOH HOH . D 4 HOH A 255 555 556 HOH HOH . D 4 HOH A 256 556 557 HOH HOH . D 4 HOH A 257 557 558 HOH HOH . D 4 HOH A 258 558 559 HOH HOH . D 4 HOH A 259 559 560 HOH HOH . D 4 HOH A 260 560 561 HOH HOH . D 4 HOH A 261 561 562 HOH HOH . D 4 HOH A 262 562 563 HOH HOH . D 4 HOH A 263 563 564 HOH HOH . D 4 HOH A 264 564 565 HOH HOH . D 4 HOH A 265 565 504 HOH HOH . D 4 HOH A 266 566 566 HOH HOH . D 4 HOH A 267 567 567 HOH HOH . D 4 HOH A 268 568 568 HOH HOH . D 4 HOH A 269 569 569 HOH HOH . D 4 HOH A 270 570 570 HOH HOH . D 4 HOH A 271 571 571 HOH HOH . D 4 HOH A 272 572 572 HOH HOH . D 4 HOH A 273 573 573 HOH HOH . D 4 HOH A 274 574 574 HOH HOH . D 4 HOH A 275 575 575 HOH HOH . D 4 HOH A 276 576 576 HOH HOH . D 4 HOH A 277 577 577 HOH HOH . D 4 HOH A 278 578 578 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . B 2 28.078 -31.319 9.726 1 48.27 ? OH2 1PE 201 A 1 HETATM 2 C C12 1PE . . . B 2 28.411 -31.071 11.136 1 41.58 ? C12 1PE 201 A 1 HETATM 3 C C22 1PE . . . B 2 28.845 -29.6 11.459 1 36.43 ? C22 1PE 201 A 1 HETATM 4 O OH3 1PE . . . B 2 29.871 -29.094 10.584 1 38.3 ? OH3 1PE 201 A 1 HETATM 5 C C13 1PE . . . B 2 31.486 -27.462 9.776 1 32.4 ? C13 1PE 201 A 1 HETATM 6 C C23 1PE . . . B 2 30.594 -27.906 10.933 1 37.94 ? C23 1PE 201 A 1 HETATM 7 O OH4 1PE . . . B 2 30.837 -26.707 8.739 1 35.73 ? OH4 1PE 201 A 1 HETATM 8 C C14 1PE . . . B 2 30.719 -24.342 7.803 1 33.09 ? C14 1PE 201 A 1 HETATM 9 C C24 1PE . . . B 2 30.97 -25.265 8.995 1 30.81 ? C24 1PE 201 A 1 HETATM 10 O OH5 1PE . . . B 2 31.247 -24.873 6.527 1 24.39 ? OH5 1PE 201 A 1 HETATM 11 C C15 1PE . . . B 2 30.649 -24.862 4.284 1 28.38 ? C15 1PE 201 A 1 HETATM 12 C C25 1PE . . . B 2 30.208 -24.58 5.681 1 25.64 ? C25 1PE 201 A 1 HETATM 13 O OH6 1PE . . . B 2 31.873 -24.191 3.874 1 34.39 ? OH6 1PE 201 A 1 HETATM 14 C C16 1PE . . . B 2 33.881 -24.561 2.61 1 29.51 ? C16 1PE 201 A 1 HETATM 15 C C26 1PE . . . B 2 32.298 -24.604 2.496 1 31.71 ? C26 1PE 201 A 1 HETATM 16 O OH7 1PE . . . B 2 34.884 -25.668 2.914 1 33.39 ? OH7 1PE 201 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #